FFCP PHASE1:Hg19::chr15:90969425..90969446,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:90969425..90969446,+
|short_description=p6@IQGAP1
|description=CAGE_peak_6_at_IQGAP1_5end
|association_with_transcript=41bp_to_ENST00000559682_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8826 | |EntrezGene=8826 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6110 | |HGNC=6110 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=41bp_to_ENST00000559682_5end | |||
|cluster_id=chr15:90969425..90969446,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_6_at_IQGAP1_5end | |||
|id=chr15:90969425..90969446,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.64e-18!42;CL:0000766!1.04e-17!76;CL:0000860!1.90e-16!45;CL:0002009!5.15e-16!65;CL:0002194!9.91e-16!63;CL:0000576!9.91e-16!63;CL:0000040!9.91e-16!63;CL:0000559!9.91e-16!63;CL:0000557!1.99e-14!71;CL:0000839!1.71e-13!70;CL:0000763!2.06e-13!112;CL:0000049!2.06e-13!112;CL:0000738!2.20e-13!140;CL:0002032!1.06e-11!165;CL:0000837!1.06e-11!165;CL:0002087!1.17e-11!119;CL:0000063!2.87e-11!578;CL:0002031!1.22e-10!124;CL:0000037!1.70e-10!172;CL:0000566!1.70e-10!172;CL:0000988!1.74e-10!182;CL:0000134!5.03e-10!358;CL:0002320!1.98e-09!365;CL:0000219!1.48e-08!390;CL:0000548!6.53e-07!679;CL:0000004!6.53e-07!679;CL:0000255!6.53e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.29e-24;33!CL:0002057;1.29e-24;33!CL:0000473;8.17e-19;39!CL:0000234;8.17e-19;39!CL:0000576;4.49e-13;48!CL:0000766;2.34e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.05e-25,42;CL:0002057,1.05e-25,42;CL:0000473,4.45e-24,48;CL:0000234,4.45e-24,48;CL:0000766,1.59e-21,72;CL:0002194,9.49e-21,59;CL:0000576,9.49e-21,59;CL:0000040,9.49e-21,59;CL:0000559,9.49e-21,59;CL:0002009,1.17e-19,61;CL:0000839,3.12e-17,66;CL:0000557,8.57e-17,67;CL:0000763,1.71e-14,108;CL:0000049,1.71e-14,108;CL:0000738,1.53e-10,136;CL:0000134,1.67e-10,354;CL:0002320,8.63e-10,361;CL:0002087,2.47e-09,115;CL:0002032,2.18e-08,161;CL:0000837,2.18e-08,161;CL:0000219,3.21e-08,386;CL:0000988,3.31e-08,177;CL:0002031,5.80e-08,120;CL:0000048,6.84e-08,427;CL:0000037,7.16e-08,168;CL:0000723,7.74e-08,433;CL:0000034,3.25e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.73e-19;42 | |||
|ontology_enrichment_disease=DOID:14566!1.15e-11!239;DOID:162!1.33e-10!235;DOID:0050687!3.07e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.74e-13!80;UBERON:0001474!8.09e-12!86;UBERON:0002390!5.35e-10!102;UBERON:0003061!5.35e-10!102;UBERON:0002193!9.56e-10!112;UBERON:0002384!1.22e-09!375;UBERON:0004765!3.62e-09!101;UBERON:0001434!3.62e-09!101;UBERON:0002405!2.56e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.93e-16,76;UBERON:0002405,4.53e-14,93;UBERON:0001474,6.13e-14,82;UBERON:0002390,1.11e-11,98;UBERON:0003061,1.11e-11,98;UBERON:0004765,1.27e-11,90;UBERON:0002193,1.52e-11,108;UBERON:0002384,1.23e-09,371;UBERON:0001434,2.60e-09,100;UBERON:0000926,3.65e-07,315;UBERON:0004120,3.65e-07,315;UBERON:0006603,3.65e-07,315 | |||
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| ||
|short_description=p6@IQGAP1 | |||
}} | }} |
Latest revision as of 19:50, 19 September 2015
Short description: | p6@IQGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_IQGAP1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 41bp_to_ENST00000559682_5end |
EntrezGene: | IQGAP1 |
HGNC: | 6110 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.05e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.05e-25 | 42 |
defensive cell | 4.45e-24 | 48 |
phagocyte | 4.45e-24 | 48 |
myeloid leukocyte | 1.59e-21 | 72 |
monopoietic cell | 9.49e-21 | 59 |
monocyte | 9.49e-21 | 59 |
monoblast | 9.49e-21 | 59 |
promonocyte | 9.49e-21 | 59 |
macrophage dendritic cell progenitor | 1.17e-19 | 61 |
myeloid lineage restricted progenitor cell | 3.12e-17 | 66 |
granulocyte monocyte progenitor cell | 8.57e-17 | 67 |
myeloid cell | 1.71e-14 | 108 |
common myeloid progenitor | 1.71e-14 | 108 |
leukocyte | 1.53e-10 | 136 |
mesenchymal cell | 1.67e-10 | 354 |
connective tissue cell | 8.63e-10 | 361 |
nongranular leukocyte | 2.47e-09 | 115 |
hematopoietic oligopotent progenitor cell | 2.18e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.18e-08 | 161 |
motile cell | 3.21e-08 | 386 |
hematopoietic cell | 3.31e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 5.80e-08 | 120 |
multi fate stem cell | 6.84e-08 | 427 |
hematopoietic stem cell | 7.16e-08 | 168 |
somatic stem cell | 7.74e-08 | 433 |
stem cell | 3.25e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.93e-16 | 76 |
immune system | 4.53e-14 | 93 |
bone element | 6.13e-14 | 82 |
hematopoietic system | 1.11e-11 | 98 |
blood island | 1.11e-11 | 98 |
skeletal element | 1.27e-11 | 90 |
hemolymphoid system | 1.52e-11 | 108 |
connective tissue | 1.23e-09 | 371 |
skeletal system | 2.60e-09 | 100 |
mesoderm | 3.65e-07 | 315 |
mesoderm-derived structure | 3.65e-07 | 315 |
presumptive mesoderm | 3.65e-07 | 315 |