FFCP PHASE1:Hg19::chr4:186696497..186696510,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8470 | |EntrezGene=8470 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24098 | |HGNC=24098 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_uc003iyn.1_5end | |association_with_transcript=9bp_to_uc003iyn.1_5end | ||
|cluster_id=chr4:186696497..186696510,- | |||
|description=CAGE_peak_25_at_SORBS2_5end | |description=CAGE_peak_25_at_SORBS2_5end | ||
|id=chr4:186696497..186696510,- | |id=chr4:186696497..186696510,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002580;7.28e-16;3!CL:0002144;1.76e-15;3!CL:0002334;1.74e-10;12!CL:0002139;2.47e-09;24!CL:0002138;3.60e-08;6!CL:0000115;2.97e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,6.63e-16,3;CL:0002144,2.22e-15,3;CL:0002334,1.63e-10,12;CL:0000115,1.18e-09,36;CL:0002139,2.62e-09,24;CL:0005020,2.82e-08,6;CL:0002138,2.82e-08,6;CL:0005022,2.82e-08,6;CL:0000213,3.26e-08,58;CL:0000215,3.26e-08,58;CL:0002078,1.98e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;3.60e-08;6!UBERON:0000358;8.32e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;7.31e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.75e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.67e-10!115;UBERON:0003688!5.38e-07!6;UBERON:0002358!5.38e-07!6;UBERON:0003684!5.38e-07!6;UBERON:0001178!5.38e-07!6 | |ontology_enrichment_uberon=UBERON:0007023!3.67e-10!115;UBERON:0003688!5.38e-07!6;UBERON:0002358!5.38e-07!6;UBERON:0003684!5.38e-07!6;UBERON:0001178!5.38e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0010523;1.76e-15;3!UBERON:0001915;1.76e-15;3!UBERON:0001982;1.76e-15;3!UBERON:0007100;5.68e-12;25!UBERON:0000310;3.01e-08;10!UBERON:0004151;8.45e-08;3!UBERON:0001443;1.67e-07;11!UBERON:0007195;8.32e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,2.22e-15,3;UBERON:0001915,2.22e-15,3;UBERON:0001982,2.22e-15,3;UBERON:0007100,3.73e-11,27;UBERON:0000310,2.33e-08,10;UBERON:0004151,5.73e-08,3;UBERON:0001443,1.33e-07,11;UBERON:0003103,4.92e-07,68;UBERON:0001009,5.23e-07,112;UBERON:0007195,8.81e-07,1 | |||
|phase1_expression=1.81678379270557,0.214100523890983,0.986680828671798,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0.730310090387373,0,0,0,0.313454721478088,0.286235987131057,0.821246550437305,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,1.00267582127178,0.434539556882471,0.795285947051099,0,0.567208902984407,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,1.8089173141853,0,1.33888245105868,1.20848795132744,1.52054421143703,1.46437234528902,1.10298924103761,0.81014194788176,0.535798369704479,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.506522046658319,0.132409180813219,0,0,0,0,1.48000529050296,0,0,0,0.605429710579726,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.300476117813194,0.340296549480063,0.89694817844431,0.213557388818567,0,0,0,0.515281080091258,0.37223371266318,0.168776332241266,0.194874010322397,0,0,0,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0,0.310983165046111,0,0.36497735907583,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,2.7429625074604,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.224262168690721,0,0.66004457238855,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0.831883446123229,0,0,0.117141414992713,0.601892199455438,0,0,0,0.184369168541703,0,0.195801157462741,1.71571711905428,0,0,0,0,0,0,1.48864684691266,2.60885354589706,1.40330047216537,0.512556597022804,3.58195074346692,0.321707842287215,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,1.13733384070897,0.680374821106063,0,1.54227252690289,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.206082023295445,0.0915694648183434,0.165018999841176,0,0,1.6068392984416,0,0.154048617114644,0,0.551346289938122,0.107420244868274,0.290033387828457,0.255679882248303,4.45160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876901770507525,0,0,0.405820753925408,0,0,0,0,0.7133421029625,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.398495976502139,0,0,2.0453736500431,0,0,0,0,0,0.789147245095469,0,4.44547960578548,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0.762569244632931,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.34945333648406,1.37588825977293,0,0,0,0.193978032976839,0,0.225980740780532,0.274083849293502,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0.627617077873999,0.101998217636322,0,0,0,0,0.859530882839914,0,0.558564802544508,2.52076466412852,0,2.1964690054889,6.86761677018513,1.56220020209311,1.74677028465488,0,0,0,0,0,0,0,0,0,0,1.10031549277787,1.24632101408756,0,0,0.182248669974074,0,0.157611414598396,0.0524545881349981,0,0,0,2.1440859791201,1.98627591109629,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.488105059607853,0,0,0,0.124192805882767,0.415045904808692,0,0,0.285465333544967,0,0.468334905806882,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0.449803112163605,0,0,0,0.521745061811734,0.300515217994437,0,0,0.181848659202559,0,0.928067519756987,0,0.400027764663154,0.343395705182793,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0362910251936,0,0.138258436151731,0,0,0,0,0,0,0,0,0.688859918643263,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0,2.66967466827017,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,1.53314913167514,0,0,0,0.227662191351298,0.443511850813194,0,0.171488009437418,0.271878931907327,0,0,0.111231401892069,0.078493092850514,0.157115589916002,0,0,0,0,0.857718530119876,0,0,0,0,0.207216164163037,0.3414369541879,0.691259661814092,0,0,0,0.846774100381858,0,0,0,0,0.196300467230486,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.735444965261716,0,0,0.297046400327086,0,0.339854229375634,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0.371995018166751,0.462175628631418,0,0,0.109265571963696,0,0,0,0,0,0.227336094654718,0,0,0,0.639701945702943,0.714193294391221,0,0.0620747142958579,0.224263725161227,0.318235791390825,1.21270313374932,0.217716747896961,0,0.0673520530145875,0.502055437748735,0,0.0814032686109745,0,0,0,4.69281884806909,0.122241444182866,0.406896178315738,0,0.402547587182052,0 | |phase1_expression=1.81678379270557,0.214100523890983,0.986680828671798,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0.730310090387373,0,0,0,0.313454721478088,0.286235987131057,0.821246550437305,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,1.00267582127178,0.434539556882471,0.795285947051099,0,0.567208902984407,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,1.8089173141853,0,1.33888245105868,1.20848795132744,1.52054421143703,1.46437234528902,1.10298924103761,0.81014194788176,0.535798369704479,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.506522046658319,0.132409180813219,0,0,0,0,1.48000529050296,0,0,0,0.605429710579726,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.300476117813194,0.340296549480063,0.89694817844431,0.213557388818567,0,0,0,0.515281080091258,0.37223371266318,0.168776332241266,0.194874010322397,0,0,0,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0,0.310983165046111,0,0.36497735907583,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,2.7429625074604,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0.224262168690721,0,0.66004457238855,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0.831883446123229,0,0,0.117141414992713,0.601892199455438,0,0,0,0.184369168541703,0,0.195801157462741,1.71571711905428,0,0,0,0,0,0,1.48864684691266,2.60885354589706,1.40330047216537,0.512556597022804,3.58195074346692,0.321707842287215,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,1.13733384070897,0.680374821106063,0,1.54227252690289,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0.206082023295445,0.0915694648183434,0.165018999841176,0,0,1.6068392984416,0,0.154048617114644,0,0.551346289938122,0.107420244868274,0.290033387828457,0.255679882248303,4.45160178233687,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876901770507525,0,0,0.405820753925408,0,0,0,0,0.7133421029625,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.398495976502139,0,0,2.0453736500431,0,0,0,0,0,0.789147245095469,0,4.44547960578548,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0.762569244632931,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0,0.394584402849391,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.34945333648406,1.37588825977293,0,0,0,0.193978032976839,0,0.225980740780532,0.274083849293502,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0.627617077873999,0.101998217636322,0,0,0,0,0.859530882839914,0,0.558564802544508,2.52076466412852,0,2.1964690054889,6.86761677018513,1.56220020209311,1.74677028465488,0,0,0,0,0,0,0,0,0,0,1.10031549277787,1.24632101408756,0,0,0.182248669974074,0,0.157611414598396,0.0524545881349981,0,0,0,2.1440859791201,1.98627591109629,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.488105059607853,0,0,0,0.124192805882767,0.415045904808692,0,0,0.285465333544967,0,0.468334905806882,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0.449803112163605,0,0,0,0.521745061811734,0.300515217994437,0,0,0.181848659202559,0,0.928067519756987,0,0.400027764663154,0.343395705182793,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0362910251936,0,0.138258436151731,0,0,0,0,0,0,0,0,0.688859918643263,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0,0,2.66967466827017,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,1.53314913167514,0,0,0,0.227662191351298,0.443511850813194,0,0.171488009437418,0.271878931907327,0,0,0.111231401892069,0.078493092850514,0.157115589916002,0,0,0,0,0.857718530119876,0,0,0,0,0.207216164163037,0.3414369541879,0.691259661814092,0,0,0,0.846774100381858,0,0,0,0,0.196300467230486,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.735444965261716,0,0,0.297046400327086,0,0.339854229375634,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0,0.371995018166751,0.462175628631418,0,0,0.109265571963696,0,0,0,0,0,0.227336094654718,0,0,0,0.639701945702943,0.714193294391221,0,0.0620747142958579,0.224263725161227,0.318235791390825,1.21270313374932,0.217716747896961,0,0.0673520530145875,0.502055437748735,0,0.0814032686109745,0,0,0,4.69281884806909,0.122241444182866,0.406896178315738,0,0.402547587182052,0 | ||
|short_description=p25@SORBS2 | |short_description=p25@SORBS2 | ||
}} | }} |
Latest revision as of 03:53, 17 September 2015
Short description: | p25@SORBS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_SORBS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_uc003iyn.1_5end |
EntrezGene: | SORBS2 |
HGNC: | 24098 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 6.63e-16 | 3 |
capillary endothelial cell | 2.22e-15 | 3 |
preadipocyte | 1.63e-10 | 12 |
endothelial cell | 1.18e-09 | 36 |
endothelial cell of vascular tree | 2.62e-09 | 24 |
lymphangioblast | 2.82e-08 | 6 |
endothelial cell of lymphatic vessel | 2.82e-08 | 6 |
vascular lymphangioblast | 2.82e-08 | 6 |
lining cell | 3.26e-08 | 58 |
barrier cell | 3.26e-08 | 58 |
meso-epithelial cell | 1.98e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 2.22e-15 | 3 |
endothelium of capillary | 2.22e-15 | 3 |
capillary | 2.22e-15 | 3 |
primary circulatory organ | 3.73e-11 | 27 |
breast | 2.33e-08 | 10 |
cardiac chamber | 5.73e-08 | 3 |
chest | 1.33e-07 | 11 |
compound organ | 4.92e-07 | 68 |
circulatory system | 5.23e-07 | 112 |
stroma of bone marrow | 8.81e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.75e-12 | 2 |