FFCP PHASE1:Hg19::chr9:20732373..20732384,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:20732373..20732384,+ | |||
|coexpression_cluster_id=C311 | |||
|description=CAGE_peak_at_chr9:20732373..20732384,+ | |description=CAGE_peak_at_chr9:20732373..20732384,+ | ||
|id=chr9:20732373..20732384,+ | |id=chr9:20732373..20732384,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.26e-16!254;CL:1000413!5.31e-16!9;CL:0002076!2.93e-15!43;CL:0002368!5.80e-15!13;CL:0002166!1.61e-13!3;CL:0000071!2.93e-13!18;CL:0002546!2.93e-13!18;CL:0000076!6.04e-13!62;CL:0000223!2.87e-10!59;CL:0002139!1.31e-09!24;CL:0002159!5.92e-08!13;CL:0000220!1.28e-07!246;CL:0002321!1.66e-07!248;CL:0002544!6.85e-07!6 | |ontology_enrichment_celltype=CL:0000066!2.26e-16!254;CL:1000413!5.31e-16!9;CL:0002076!2.93e-15!43;CL:0002368!5.80e-15!13;CL:0002166!1.61e-13!3;CL:0000071!2.93e-13!18;CL:0002546!2.93e-13!18;CL:0000076!6.04e-13!62;CL:0000223!2.87e-10!59;CL:0002139!1.31e-09!24;CL:0002159!5.92e-08!13;CL:0000220!1.28e-07!246;CL:0002321!1.66e-07!248;CL:0002544!6.85e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002166;2.31e-12;3!CL:0002621;2.89e-12;3!CL:0002368;3.56e-11;13!CL:0002076;1.38e-09;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,2.31e-12,3;CL:0002621,2.59e-12,3;CL:0002368,3.56e-11,13;CL:0002076,8.13e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003915!5.31e-16!9;UBERON:0004700!5.31e-16!9;UBERON:0001917!5.31e-16!9;UBERON:0001986!2.93e-13!18;UBERON:0004638!2.93e-13!18;UBERON:0004852!2.93e-13!18;UBERON:0000487!1.32e-10!22;UBERON:0001708!3.03e-10!4;UBERON:0001704!3.03e-10!4;UBERON:0006914!3.58e-09!25;UBERON:0000065!5.26e-07!53;UBERON:0002090!5.96e-07!6;UBERON:0004119!7.29e-07!169;UBERON:0000925!7.29e-07!169;UBERON:0006595!7.29e-07!169 | |ontology_enrichment_uberon=UBERON:0003915!5.31e-16!9;UBERON:0004700!5.31e-16!9;UBERON:0001917!5.31e-16!9;UBERON:0001986!2.93e-13!18;UBERON:0004638!2.93e-13!18;UBERON:0004852!2.93e-13!18;UBERON:0000487!1.32e-10!22;UBERON:0001708!3.03e-10!4;UBERON:0001704!3.03e-10!4;UBERON:0006914!3.58e-09!25;UBERON:0000065!5.26e-07!53;UBERON:0002090!5.96e-07!6;UBERON:0004119!7.29e-07!169;UBERON:0000925!7.29e-07!169;UBERON:0006595!7.29e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.89e-12;3!UBERON:0001052;1.12e-09;4!UBERON:0001708;1.32e-09;4!UBERON:0008895;1.32e-09;4!UBERON:0004907;5.35e-08;5!UBERON:0011159;6.13e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.59e-12,3;UBERON:0001052,1.12e-09,4;UBERON:0001708,1.32e-09,4;UBERON:0008895,1.32e-09,4;UBERON:0004907,5.35e-08,5;UBERON:0011159,6.13e-08,5;UBERON:0010188,8.02e-07,6;UBERON:0002539,8.02e-07,6;UBERON:0008816,8.02e-07,6 | |||
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| ||
|short_description=p@chr9:20732373..20732384,+ | |short_description=p@chr9:20732373..20732384,+ | ||
}} | }} |
Latest revision as of 01:05, 1 August 2015
Short description: | p@chr9:20732373..20732384, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:20732373..20732384, + |
Coexpression cluster: | C311_rectal_heart_choriocarcinoma_placenta_chorionic_lung_ductal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 2.31e-12 | 3 |
gingival epithelial cell | 2.59e-12 | 3 |
respiratory epithelial cell | 3.56e-11 | 13 |
endo-epithelial cell | 8.13e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.59e-12 | 3 |
rectum | 1.12e-09 | 4 |
jaw skeleton | 1.32e-09 | 4 |
splanchnocranium | 1.32e-09 | 4 |
lower digestive tract | 5.35e-08 | 5 |
primary subdivision of cranial skeletal system | 6.13e-08 | 5 |
protuberance | 8.02e-07 | 6 |
pharyngeal arch | 8.02e-07 | 6 |
embryonic head | 8.02e-07 | 6 |