FFCP PHASE1:Hg19::chr16:22309943..22309949,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:22309943..22309949,-
|short_description=p@chr16:22309943..22309949,-
|description=CAGE_peak_at_chr16:22309943..22309949,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:22309943..22309949,- | |||
|coexpression_cluster_id=C152 | |||
|description=CAGE_peak_at_chr16:22309943..22309949,- | |||
|id=chr16:22309943..22309949,- | |||
|ontology_enrichment_celltype=CL:0002032!2.95e-08!165;CL:0000837!2.95e-08!165;CL:0000037!4.20e-08!172;CL:0000566!4.20e-08!172;CL:0000988!5.31e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0002127;2.19e-08;1!CL:0000911;2.19e-08;1!CL:0000814;2.19e-08;1!CL:0000946;6.18e-08;1!CL:0000785;6.18e-08;1!CL:0000819;6.18e-08;1!CL:0000786;6.18e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000785,2.70e-14,2;CL:0000955,2.70e-14,2;CL:0000818,2.70e-14,2;CL:0000954,2.70e-14,2;CL:0000816,2.70e-14,2;CL:0000817,7.85e-10,3;CL:0002127,2.19e-08,1;CL:0000914,2.19e-08,1;CL:0000911,2.19e-08,1;CL:0000814,2.19e-08,1;CL:0002042,2.19e-08,1;CL:0002039,2.19e-08,1;CL:0002040,2.19e-08,1;CL:0002041,2.19e-08,1;CL:0000819,4.71e-08,1;CL:0000946,6.19e-08,1;CL:0000786,6.19e-08,1;CL:0000980,6.19e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000954;3.52e-14;2 | |||
|ontology_enrichment_disease=DOID:162!5.24e-42!235;DOID:14566!7.01e-42!239;DOID:0050687!1.58e-26!143;DOID:0050686!1.79e-20!137;DOID:305!2.73e-16!106;DOID:2531!2.76e-13!51;DOID:0060083!2.76e-13!51;DOID:1240!2.50e-10!39;DOID:3095!1.29e-09!22;DOID:2994!1.29e-09!22;DOID:3119!2.05e-07!14;DOID:8692!5.36e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:171;2.44e-11;10!DOID:3095;9.04e-11;22!DOID:2994;9.04e-11;22!DOID:0060073;6.18e-08;1!DOID:8675;6.18e-08;1!DOID:3119;1.01e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.25e-13,235;DOID:14566,7.67e-13,239;DOID:171,2.45e-11,10;DOID:3095,9.72e-11,22;DOID:2994,9.72e-11,22;DOID:0060073,4.71e-08,1;DOID:8675,4.71e-08,1;DOID:0050686,6.37e-08,137;DOID:3119,1.01e-07,14;DOID:0050687,1.28e-07,143;DOID:2531,2.41e-07,51;DOID:0060083,2.41e-07,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;5.05e-08;4!UBERON:0000923;5.05e-08;4!UBERON:0010316;5.05e-08;4!UBERON:0005291;5.05e-08;4 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0.313454721478088,0,0,0,0.0764134057479513,0.246301768349837,0.0787107813136792,0,0,0,0.919421224478927,0,0,0.0774672005803016,0.710846162437108,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0.242584061187816,0,0.411167888021826,0,0,0.512321413058201,0.709446689665756,0.344745680736619,0.645484683583826,0,0.188242339542605,0,0,0.612167784741805,0,0.639337125799041,0.659702600373432,0.199463657621632,0,0.580418477257168,0,0,0.502497330513487,1.0429658368404,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.764546456250458,0,0,0,0.196709770113833,0.786021525498329,0.205601498999509,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0.434473211648397,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0,0,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,5.29755719297581,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47463946379935,0.197030760201927,0.646882724578552,0.513372145118994,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.788512075169673,0.35142424497814,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0.854592569019785,0,0,0.557409525377156,0.432807638929335,0.426851060090485,0.478278818186467,0,0.383010740264733,0.635020748171649,0,1.12318871245384,0.684704037099577,0.156679895773023,2.50634477090067,0,0.321176150207399,0.201799707191048,0.425846237690326,0.343505344755765,0,0,0.166849141711909,0,0,0,0.270455678475983,0.33307196799782,1.4098700508785,0,0,0.606802608747567,0.222886768554957,0.568272293612826,0,0,0,0,0,0.445234820091624,0.659215496907038,1.47787785689595,0,0.276283915531148,0.251932747854276,0,0.369254416383208,0,0,0.179021174675609,1.02314474045374,0,0,0,0,0,0,0.260427761085233,0.524759999977174,0,1.593108275997,0,0,1.03423011972439,1.74962768029953,2.43074992906609,0,0.120596438625408,0,0.442317039724898,0,0,0.435753854075961,0,0,0.455768223388005,0.46112780877612,0.0897576444097721,0,0.31900115973192,0,1.06606955203727,0,0.470940769185074,0.997270091400938,0,0,0,0.37950746544837,0.476809736941136,0.421996129056054,0.326465616318295,0.282706142867882,0,0,0,0,0,0,0.208843899010911,0,0,0,1.45963831372533,0.391329237864179,0.728341138602278,0,0,0,0,0.300646838828985,0,0.664653872707185,0.330991955875499,0.313932918407225,0,0,0.138674673013139,1.38847790668105,0.391969589657511,0.0870592065804026,0,0,0.19351266257817,0.0730893170861856,0.246346371159628,0,0.0882561266915003,0,0.959293472527256,0.596143835108969,0,0,0.160317640503067,0,0.39961921916426,0.288180834308212,0.343609788497747,0.686379991447858,0.864328787928898,0,0,0.543616824294456,0.209205692624666,0.407992870545287,0.288950589901519,0,0,0,0,0.525774708558629,0,0,0,0.399358000997982,0,0,0,0.720599767084807,0,0.157566364614447,0.0824158583811665,0,0.295282444544246,0.0846733320657845,0,0,0.321506296930038,0.137539436597234,0.415440338029185,0.2249738915515,0,0,0,0,0,0,0.179287339332845,0.383830394638891,0,0,0.25426853765475,0.542999601753713,0,0,0,3.28370082997356,0.340776043570843,0.113312091520126,0,0,0.258565912723101,0,0,0,0,0,0,0,0.592834895693833,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,1.52183498429854,0.624902039810533,0.606596470166591,0,0.470531639396343,1.87333962322753,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0.107410557042488,0,0,1.20008329398946,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0.308801447160972,0.219284049578707,0.176689145945881,0.192914038270915,0.337884881306145,0.512483037175893,0,0,0.276516872303462,0,0.132864840313363,0,0.655219697692825,0.245772908753719,0.633936370075881,0.19998739585493,0,0,0,0.184105950251841,0.139879507719444,0,0.76736622782191,0,4.08891448825331,1.31051565830417,0.169732529954025,3.61377364172861,0.867550349813015,0,0,0,0,0,0,0,0,0,0,0,0,0.161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| ||
|short_description=p@chr16:22309943..22309949,- | |||
}} | }} |
Latest revision as of 07:10, 25 July 2015
Short description: | p@chr16:22309943..22309949, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:22309943..22309949, - |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature B cell | 2.70e-14 | 2 |
pre-B-II cell | 2.70e-14 | 2 |
transitional stage B cell | 2.70e-14 | 2 |
small pre-B-II cell | 2.70e-14 | 2 |
immature B cell | 2.70e-14 | 2 |
precursor B cell | 7.85e-10 | 3 |
innate effector T cell | 2.19e-08 | 1 |
immature NK T cell | 2.19e-08 | 1 |
effector T cell | 2.19e-08 | 1 |
mature NK T cell | 2.19e-08 | 1 |
immature NK T cell stage IV | 2.19e-08 | 1 |
immature NK T cell stage I | 2.19e-08 | 1 |
immature NK T cell stage II | 2.19e-08 | 1 |
immature NK T cell stage III | 2.19e-08 | 1 |
B-1 B cell | 4.71e-08 | 1 |
antibody secreting cell | 6.19e-08 | 1 |
plasma cell | 6.19e-08 | 1 |
plasmablast | 6.19e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.25e-13 | 235 |
disease of cellular proliferation | 7.67e-13 | 239 |
neuroectodermal tumor | 2.45e-11 | 10 |
germ cell and embryonal cancer | 9.72e-11 | 22 |
germ cell cancer | 9.72e-11 | 22 |
lymphatic system cancer | 4.71e-08 | 1 |
lymphosarcoma | 4.71e-08 | 1 |
organ system cancer | 6.37e-08 | 137 |
gastrointestinal system cancer | 1.01e-07 | 14 |
cell type cancer | 1.28e-07 | 143 |
hematologic cancer | 2.41e-07 | 51 |
immune system cancer | 2.41e-07 | 51 |