FFCP PHASE1:Hg19::chr5:180017672..180017683,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92304 | |EntrezGene=92304 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18384 | |HGNC=18384 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=479bp_to_ENST00000512120_5end | |association_with_transcript=479bp_to_ENST00000512120_5end | ||
|cluster_id=chr5:180017672..180017683,- | |||
|coexpression_cluster_id=C365 | |||
|description=CAGE_peak_11_at_SCGB3A1_5end | |description=CAGE_peak_11_at_SCGB3A1_5end | ||
|id=chr5:180017672..180017683,- | |id=chr5:180017672..180017683,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.48e-40;1!UBERON:0008947;3.93e-13;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!3.13e-19!2;UBERON:0000341!9.18e-19!2;UBERON:0002110!1.68e-12!3;UBERON:0006242!1.68e-12!3;UBERON:0002171!2.16e-10!1;UBERON:0006518!2.16e-10!1;UBERON:0008949!2.16e-10!1;UBERON:0000101!2.16e-10!1;UBERON:0002167!2.16e-10!1;UBERON:0001831!3.10e-10!1;UBERON:0001567!3.10e-10!1;UBERON:0008801!3.10e-10!1;UBERON:0007029!3.40e-10!1;UBERON:0002372!6.33e-10!1;UBERON:0001961!6.33e-10!1;UBERON:0001744!6.33e-10!1;UBERON:0001735!6.33e-10!1;UBERON:0007023!6.37e-09!115;UBERON:0001044!8.89e-07!6;UBERON:0003293!8.89e-07!6;UBERON:0003294!8.89e-07!6;UBERON:0010047!8.89e-07!6;UBERON:0000167!8.89e-07!6 | |ontology_enrichment_uberon=UBERON:0003127!3.13e-19!2;UBERON:0000341!9.18e-19!2;UBERON:0002110!1.68e-12!3;UBERON:0006242!1.68e-12!3;UBERON:0002171!2.16e-10!1;UBERON:0006518!2.16e-10!1;UBERON:0008949!2.16e-10!1;UBERON:0000101!2.16e-10!1;UBERON:0002167!2.16e-10!1;UBERON:0001831!3.10e-10!1;UBERON:0001567!3.10e-10!1;UBERON:0008801!3.10e-10!1;UBERON:0007029!3.40e-10!1;UBERON:0002372!6.33e-10!1;UBERON:0001961!6.33e-10!1;UBERON:0001744!6.33e-10!1;UBERON:0001735!6.33e-10!1;UBERON:0007023!6.37e-09!115;UBERON:0001044!8.89e-07!6;UBERON:0003293!8.89e-07!6;UBERON:0003294!8.89e-07!6;UBERON:0010047!8.89e-07!6;UBERON:0000167!8.89e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.05e-79;2!UBERON:0002171;2.70e-40;1!UBERON:0006518;2.70e-40;1!UBERON:0008949;2.70e-40;1!UBERON:0000101;2.70e-40;1!UBERON:0002167;2.70e-40;1!UBERON:0003126;1.02e-23;7!UBERON:0001005;1.02e-23;7!UBERON:0000341;6.30e-21;2!UBERON:0007196;1.15e-11;15!UBERON:0001558;1.15e-11;15!UBERON:0005181;1.65e-09;35!UBERON:0005178;2.23e-09;34!UBERON:0002224;2.23e-09;34!UBERON:0000974;7.01e-08;6!UBERON:0000065;1.91e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.05e-79,2;UBERON:0002171,2.21e-40,1;UBERON:0006518,2.21e-40,1;UBERON:0008949,2.21e-40,1;UBERON:0000101,2.21e-40,1;UBERON:0002167,2.21e-40,1;UBERON:0003126,1.02e-23,7;UBERON:0001005,1.02e-23,7;UBERON:0000341,6.96e-21,2;UBERON:0007196,1.15e-11,15;UBERON:0001558,1.15e-11,15;UBERON:0005178,2.48e-11,34;UBERON:0002224,2.48e-11,34;UBERON:0005181,4.95e-11,35;UBERON:0008947,3.18e-10,38;UBERON:0003258,3.18e-10,38;UBERON:0000915,1.12e-07,52;UBERON:0000065,2.03e-07,54 | |||
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|short_description=p11@SCGB3A1 | |short_description=p11@SCGB3A1 | ||
}} | }} |
Latest revision as of 10:39, 17 September 2015
Short description: | p11@SCGB3A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SCGB3A1_5end |
Coexpression cluster: | C365_trachea_throat_aorta_lung_parotid_salivary_umbilical |
Association with transcript: | 479bp_to_ENST00000512120_5end |
EntrezGene: | SCGB3A1 |
HGNC: | 18384 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.05e-79 | 2 |
lower lobe of right lung | 2.21e-40 | 1 |
right lung lobe | 2.21e-40 | 1 |
lower lobe of lung | 2.21e-40 | 1 |
lobe of lung | 2.21e-40 | 1 |
right lung | 2.21e-40 | 1 |
trachea | 1.02e-23 | 7 |
respiratory airway | 1.02e-23 | 7 |
throat | 6.96e-21 | 2 |
tracheobronchial tree | 1.15e-11 | 15 |
lower respiratory tract | 1.15e-11 | 15 |
thoracic cavity element | 2.48e-11 | 34 |
thoracic cavity | 2.48e-11 | 34 |
thoracic segment organ | 4.95e-11 | 35 |
respiratory primordium | 3.18e-10 | 38 |
endoderm of foregut | 3.18e-10 | 38 |
thoracic segment of trunk | 1.12e-07 | 52 |
respiratory tract | 2.03e-07 | 54 |