FFCP PHASE1:Hg19::chr6:10412600..10412637,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7020 | |EntrezGene=7020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11742 | |HGNC=11742 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N1C6,P05549 | |UniProt=Q8N1C6,P05549 | ||
|association_with_transcript=0bp_to_ENST00000379608,NM_001032280,uc003myq.2,uc003myv.1_5end | |association_with_transcript=0bp_to_ENST00000379608,NM_001032280,uc003myq.2,uc003myv.1_5end | ||
|cluster_id=chr6:10412600..10412637,- | |||
|coexpression_cluster_id=C2835 | |||
|description=CAGE_peak_1_at_TFAP2A_5end | |description=CAGE_peak_1_at_TFAP2A_5end | ||
|id=chr6:10412600..10412637,- | |id=chr6:10412600..10412637,- | ||
|ontology_enrichment_celltype=CL:0000066!1.29e-38!254;CL:0002077!2.28e-12!33;CL:0002076!3.13e-12!43;CL:0000076!1.52e-10!62;CL:0002321!6.04e-10!248;CL:0000220!7.40e-10!246;CL:0002159!1.32e-07!13;CL:0000223!1.66e-07!59;CL:0000077!2.22e-07!19;CL:0000075!9.75e-07!27 | |ontology_enrichment_celltype=CL:0000066!1.29e-38!254;CL:0002077!2.28e-12!33;CL:0002076!3.13e-12!43;CL:0000076!1.52e-10!62;CL:0002321!6.04e-10!248;CL:0000220!7.40e-10!246;CL:0002159!1.32e-07!13;CL:0000223!1.66e-07!59;CL:0000077!2.22e-07!19;CL:0000075!9.75e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002077;6.85e-11;34!CL:0002076;2.28e-09;42!CL:0000077;3.57e-08;19!CL:0000075;1.63e-07;27!CL:0000710;3.40e-07;20!CL:0000150;5.37e-07;9!CL:0000148;9.08e-07;10!CL:0002159;9.77e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.07e-42,253;CL:0002077,2.33e-12,34;CL:0002076,2.39e-12,42;CL:0000076,8.93e-12,63;CL:0002321,8.37e-10,250;CL:0000077,3.21e-08,19;CL:0000223,4.00e-08,58;CL:0000075,1.51e-07,27;CL:0000710,3.57e-07,20;CL:0000150,5.32e-07,9;CL:0000221,6.84e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.81e-07;29 | |||
|ontology_enrichment_disease=DOID:0050687!6.81e-23!143;DOID:305!5.39e-18!106;DOID:14566!3.44e-15!239;DOID:162!5.04e-15!235 | |ontology_enrichment_disease=DOID:0050687!6.81e-23!143;DOID:305!5.39e-18!106;DOID:14566!3.44e-15!239;DOID:162!5.04e-15!235 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.08e-24,143;DOID:305,9.89e-20,106;DOID:14566,2.52e-16,239;DOID:162,4.67e-16,235 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.06e-12!72;UBERON:0003102!2.36e-11!95;UBERON:0004119!4.55e-11!169;UBERON:0000925!4.55e-11!169;UBERON:0006595!4.55e-11!169;UBERON:0000065!9.98e-09!53;UBERON:0000077!9.66e-08!130;UBERON:0008947!1.14e-07!38;UBERON:0003258!1.14e-07!38;UBERON:0005631!2.13e-07!14;UBERON:0000158!2.13e-07!14;UBERON:0001007!2.30e-07!155;UBERON:0001555!2.30e-07!155;UBERON:0007026!2.30e-07!155;UBERON:0002097!3.40e-07!40;UBERON:0000072!4.26e-07!46 | |ontology_enrichment_uberon=UBERON:0001004!2.06e-12!72;UBERON:0003102!2.36e-11!95;UBERON:0004119!4.55e-11!169;UBERON:0000925!4.55e-11!169;UBERON:0006595!4.55e-11!169;UBERON:0000065!9.98e-09!53;UBERON:0000077!9.66e-08!130;UBERON:0008947!1.14e-07!38;UBERON:0003258!1.14e-07!38;UBERON:0005631!2.13e-07!14;UBERON:0000158!2.13e-07!14;UBERON:0001007!2.30e-07!155;UBERON:0001555!2.30e-07!155;UBERON:0007026!2.30e-07!155;UBERON:0002097!3.40e-07!40;UBERON:0000072!4.26e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0001004;1.39e-07;65!UBERON:0000065;2.92e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.16e-13,74;UBERON:0003102,1.29e-12,99;UBERON:0004119,1.25e-09,160;UBERON:0000925,1.25e-09,160;UBERON:0006595,1.25e-09,160;UBERON:0000065,5.83e-09,54;UBERON:0008947,2.03e-08,38;UBERON:0003258,2.03e-08,38;UBERON:0005631,4.52e-08,14;UBERON:0000158,4.52e-08,14;UBERON:0000072,3.47e-07,47;UBERON:0000166,3.83e-07,22;UBERON:0000161,4.13e-07,36;UBERON:0004175,9.48e-07,25 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,3.48935409640147,2.53299878168311,0,0.261185628199839,0,0.697801167972428,78.638893966862,67.5243464264841,0,0,0,1.80808358407193,1.46062018077475,3.41552959153355,0.492484232307152,0,0.313454721478088,0,0,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0.928896739896456,40.4545338770728,48.4941529232983,55.4631015250182,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.05399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,2.53007406669196,2.00535164254356,0.579386075843295,1.5905718941022,0.486634870302636,0.0945348171640679,0,0,1.89919659471683,88.5237550550877,65.9996308156284,0,0,0,0,0,0,2.98143611050058,6.881876760849,6.2485290289367,11.3061588384802,13.423981958717,17.3324366422242,2.50793959844173,0,0.35576626268671,1.33888245105868,0,0,0.24406205754817,0,2.43042584364528,0,0,0,0,0,0,0,0,60.6170732478123,0,5.31848148991235,12.3140538156293,13.1944845544454,5.67469411517371,6.72813120170769,8.5399196583764,16.0333906471154,0.933633106199299,3.23305612967251,0.163461903113459,0,0,7.0296429550139,0,3.4228309292667,0,0,0.323745888736263,0.561803226808994,3.67477508258808,12.5291003658003,2.58314452939414,0,0,0,0,11.6151918628306,16.1402890634834,11.9137569658199,0,0.612975591598039,0,1.81491493056034,10.9427677770206,10.0371972744727,5.72216133130817,12.0036438433761,6.38925681278321,9.27505944164265,9.86419338557426,15.6961988984378,20.6566450941741,10.0973509697646,7.91629128323774,61.5871476479673,6.03516307278244,6.04512589365842,24.9254070696417,58.5580385084789,50.7307784298952,49.9039995976867,1.82960559194393,1.85541675650079,5.11253348625881,11.0917328866446,3.02785021050754,0,0,18.6539872075937,9.66944449467364,0.928735856063958,0.721879481669586,50.1620832168938,43.6634347302283,33.982555213571,43.2352373110984,35.0785904988774,39.386922772442,37.0786097440452,38.8518500948185,35.0119912821215,0,0,0,0,0,0,0,0,0.368965315629341,3.43135620597051,86.8124757582228,28.1004383144049,33.0740319234265,49.6274066049719,5.2129328849652,1.03993478527958,0,1.62302566965108,1.76113041353732,0.433099343283221,0,0.570762456703795,10.2726571734706,8.58486162094873,0,0,0,27.1828118561653,51.7384954852487,36.1526497968085,21.7627210167921,35.1667065601894,31.4373796915473,0,0,0.829312462163088,0.720599767084807,0.75745460055828,92.2624404065216,137.51583320098,182.859217647673,73.5611517897632,154.241239054985,109.925559170874,305.834282914719,2.91540819297938,1.30788020649984,2.42016343209135,8.53193324001333,0,0,17.0200394614317,13.5209667984776,0,0,0,0,0,0,0,0,0,3.91871190177462,7.84380112740265,2.59929777073348,0,0,0,6.46987109827273,2.29723871668228,0,0,0,0,3.02629888782524,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.12269149171914,1.50051156317903,0,50.3289484904553,43.3582442777103,75.6971592162886,87.6217784145495,0.601892199455438,0,1.03473071292505,0,0.368738337083406,26.5863860272334,0.391602314925481,0,0,0,0,14.8532510008667,39.9445054825193,60.4780586659361,0,0,0,0,0.511707249066704,0.482561763430822,1.48418066444991,0,0,0,1.03850885836724,0,0.241718899183244,52.5326952194606,52.7624066602686,1.37777337797528,0,0.655622074797121,14.4383876130372,29.342843436782,3.92174884588428,11.6911379722609,15.304986189467,0,0.170093705276516,0,1.54227252690289,0,0,6.626783099171,22.4390522410756,13.4324852833307,0,0,0,0,0,68.1101086991444,1.73981983154852,1.73269949833235,68.3375990215445,60.4556028813965,0,0.096670718292122,0,0,0,0,0,0.255679882248303,0.0890320356467374,61.4859885142839,70.533754722994,65.5929342222162,56.4460417173969,14.4102120282159,12.5924938732256,4.1822236209636,5.23657086299351,4.25844824253617,3.47973196830029,13.1580195563783,4.8662461492277,0.372158369359667,0,0.571890581771475,0,0.42793898803392,13.0463331649634,32.9678428883677,0,0,0,3.03273722359974,3.17020642346017,2.52755073743389,0,0.243713489631284,3.16950440270266,0,1.1312434556297,1.13008116620243,25.3628058031217,21.230047207719,24.1147986889569,0,1.31178950409327,0.405820753925408,0.6196469961995,0.563391205064483,0.286822704408103,0.589494246078727,0.35667105148125,0,1.05553817648832,0.987884678879706,14.0405074293315,2.79947776195986,52.6334956608551,38.2072297055399,46.8231234903687,75.4091844222001,55.1046877019174,67.3885902670502,62.0802214951346,33.769339830423,0,0,0,0,0,0,0,0,7.26403683666817,6.73735898684351,32.5903487254772,0,0,0,0.478278818186467,0,0,0,0,0,1.36940807419915,0.47003968731907,0,0,24.2487993406586,2.21979677910152,0,0,0.614481528616916,0.671028323677248,0,0,0.278406173895242,0,0.270455678475983,0,18.3283106614204,22.0825837681699,0.293016358543788,0.970884173996107,0.445773537109913,0.284136146806413,23.6357039890313,33.2600442532555,27.6444631889309,0,0,15.0266751780923,1.81284261649436,0,4.38345574152353,0.276283915531148,49.3788185794381,5.31797149011205,0.2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| ||
|short_description=p1@TFAP2A | |short_description=p1@TFAP2A | ||
}} | }} |
Latest revision as of 12:50, 19 September 2015
Short description: | p1@TFAP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TFAP2A_5end |
Coexpression cluster: | C2835_Melanocyte_myxofibrosarcoma_placenta_cervical_Corneal_breast_salivary |
Association with transcript: | 0bp_to_ENST00000379608, NM_001032280, uc003myq.2, uc003myv.1_5end |
EntrezGene: | TFAP2A |
HGNC: | 11742 |
UniProt: | Q8N1C6P05549 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.07e-42 | 253 |
ecto-epithelial cell | 2.33e-12 | 34 |
endo-epithelial cell | 2.39e-12 | 42 |
squamous epithelial cell | 8.93e-12 | 63 |
embryonic cell | 8.37e-10 | 250 |
mesothelial cell | 3.21e-08 | 19 |
endodermal cell | 4.00e-08 | 58 |
columnar/cuboidal epithelial cell | 1.51e-07 | 27 |
neurecto-epithelial cell | 3.57e-07 | 20 |
glandular epithelial cell | 5.32e-07 | 9 |
ectodermal cell | 6.84e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 1.16e-13 | 74 |
surface structure | 1.29e-12 | 99 |
endoderm-derived structure | 1.25e-09 | 160 |
endoderm | 1.25e-09 | 160 |
presumptive endoderm | 1.25e-09 | 160 |
respiratory tract | 5.83e-09 | 54 |
respiratory primordium | 2.03e-08 | 38 |
endoderm of foregut | 2.03e-08 | 38 |
extraembryonic membrane | 4.52e-08 | 14 |
membranous layer | 4.52e-08 | 14 |
segment of respiratory tract | 3.47e-07 | 47 |
oral opening | 3.83e-07 | 22 |
orifice | 4.13e-07 | 36 |
internal genitalia | 9.48e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.08e-24 | 143 |
carcinoma | 9.89e-20 | 106 |
disease of cellular proliferation | 2.52e-16 | 239 |
cancer | 4.67e-16 | 235 |