FFCP PHASE1:Hg19::chr16:431936..431995,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:431936..431995,-
|short_description=p1@TMEM8A
|description=CAGE_peak_1_at_TMEM8A_5end
|association_with_transcript=0bp_to_ENST00000250930,ENST00000382942,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58986 | |EntrezGene=58986 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17205 | |HGNC=17205 | ||
|TSSclassifier=strong | |||
|UniProt=E9PGP3,Q9HCN3 | |UniProt=E9PGP3,Q9HCN3 | ||
|association_with_transcript=0bp_to_ENST00000250930,ENST00000382942,ENST00000431232,NM_021259,uc002cgu.3,uc002cgv.3_5end | |||
|cluster_id=chr16:431936..431995,- | |||
|description=CAGE_peak_1_at_TMEM8A_5end | |||
|id=chr16:431936..431995,- | |||
|ontology_enrichment_celltype=CL:0000222!2.16e-22!119;CL:0002321!4.79e-16!248;CL:0000220!1.14e-15!246;CL:0000055!5.63e-15!180;CL:0002371!1.14e-14!591;CL:0000183!3.65e-14!59;CL:0000192!4.47e-14!42;CL:0000514!4.47e-14!42;CL:0000115!4.91e-14!35;CL:0002078!6.47e-14!44;CL:0000144!5.60e-13!625;CL:0000680!3.72e-12!57;CL:0000056!3.72e-12!57;CL:0000355!3.72e-12!57;CL:0000187!1.41e-11!54;CL:0000359!1.52e-11!32;CL:0000393!6.68e-11!60;CL:0000211!6.68e-11!60;CL:0000213!7.86e-10!57;CL:0000215!7.86e-10!57;CL:0002139!1.57e-09!24;CL:1000449!4.90e-09!16;CL:0000548!6.87e-09!679;CL:0000004!6.87e-09!679;CL:0000255!6.87e-09!679;CL:0000012!5.21e-08!682;CL:0000071!1.05e-07!18;CL:0002546!1.05e-07!18;CL:0002681!1.98e-07!13;CL:0002584!1.98e-07!13;CL:1000507!2.36e-07!12;CL:1000494!2.36e-07!12;CL:0000003!2.88e-07!722;CL:1000497!2.91e-07!18;CL:0002518!2.91e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.26e-12;36!CL:0000359;6.90e-11;32!CL:0000192;2.81e-10;43!CL:0002078;9.36e-10;45!CL:0002139;1.70e-09;24!CL:1000449;2.69e-09;15!CL:0000071;1.05e-07;18!CL:0002681;1.12e-07;12!CL:0002584;1.12e-07;12!CL:1000497;2.10e-07;17!CL:0002518;2.10e-07;17!CL:1000507;3.59e-07;10!CL:1000494;3.59e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.70e-23,121;CL:0002321,1.91e-16,250;CL:0000115,1.57e-14,36;CL:0002078,2.14e-14,45;CL:0000192,5.84e-14,43;CL:0000514,5.84e-14,43;CL:0000680,4.11e-12,58;CL:0000056,4.11e-12,58;CL:0000355,4.11e-12,58;CL:0000359,1.52e-11,32;CL:0000187,1.56e-11,55;CL:0000393,7.08e-11,61;CL:0000211,7.08e-11,61;CL:0000213,3.07e-10,58;CL:0000215,3.07e-10,58;CL:0002139,1.57e-09,24;CL:1000449,2.61e-09,15;CL:0000071,1.05e-07,18;CL:0002546,1.05e-07,18;CL:0002681,1.07e-07,12;CL:0002584,1.07e-07,12;CL:1000497,2.05e-07,17;CL:0002518,2.05e-07,17;CL:1000507,3.72e-07,10;CL:1000494,3.72e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;2.81e-10;43!CL:0002546;1.05e-07;18!CL:0000222;5.34e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.48e-27!118;UBERON:0001009!1.27e-23!113;UBERON:0004535!1.76e-23!110;UBERON:0002049!1.36e-21!79;UBERON:0007798!1.36e-21!79;UBERON:0004872!3.00e-21!84;UBERON:0000055!3.49e-20!69;UBERON:0001981!1.24e-17!60;UBERON:0007500!1.24e-17!60;UBERON:0004537!1.24e-17!60;UBERON:0006965!1.24e-17!60;UBERON:0000490!3.49e-16!138;UBERON:0005256!8.45e-15!143;UBERON:0001637!1.51e-13!42;UBERON:0003509!1.51e-13!42;UBERON:0004572!1.51e-13!42;UBERON:0002100!4.28e-12!216;UBERON:0003081!1.62e-11!216;UBERON:0000926!2.67e-11!448;UBERON:0004120!2.67e-11!448;UBERON:0006603!2.67e-11!448;UBERON:0001134!2.05e-10!61;UBERON:0002036!2.05e-10!61;UBERON:0003082!2.05e-10!61;UBERON:0004573!2.78e-10!33;UBERON:0004571!2.78e-10!33;UBERON:0002385!2.99e-10!63;UBERON:0001015!2.99e-10!63;UBERON:0000383!2.99e-10!63;UBERON:0009569!6.12e-10!113;UBERON:0000486!6.63e-10!82;UBERON:0004290!8.82e-10!70;UBERON:0002417!1.46e-09!61;UBERON:0000916!1.46e-09!61;UBERON:0006555!2.72e-09!17;UBERON:0005103!2.72e-09!17;UBERON:0000083!2.72e-09!17;UBERON:0009201!2.72e-09!17;UBERON:0004819!2.72e-09!17;UBERON:0006553!2.72e-09!17;UBERON:0003074!2.72e-09!17;UBERON:0003060!2.72e-09!17;UBERON:0004211!4.90e-09!16;UBERON:0001285!4.90e-09!16;UBERON:0007684!4.90e-09!16;UBERON:0003220!4.90e-09!16;UBERON:0004208!4.90e-09!16;UBERON:0005172!1.13e-08!55;UBERON:0005173!1.13e-08!55;UBERON:0000353!1.59e-08!17;UBERON:0000080!5.27e-08!18;UBERON:0002120!5.27e-08!18;UBERON:0004875!5.27e-08!18;UBERON:0005721!5.27e-08!18;UBERON:0005754!5.27e-08!18;UBERON:0007297!5.27e-08!18;UBERON:0000914!7.53e-08!83;UBERON:0002329!7.53e-08!83;UBERON:0003077!7.53e-08!83;UBERON:0003059!7.53e-08!83;UBERON:0007282!7.53e-08!83;UBERON:0009618!7.53e-08!83;UBERON:0007285!7.53e-08!83;UBERON:0001851!8.46e-08!16;UBERON:0001986!1.05e-07!18;UBERON:0004638!1.05e-07!18;UBERON:0004852!1.05e-07!18;UBERON:0001225!1.98e-07!13;UBERON:0008987!1.98e-07!13;UBERON:0003887!2.20e-07!21;UBERON:0009773!2.36e-07!12;UBERON:0001231!2.36e-07!12;UBERON:0004810!2.36e-07!12;UBERON:0003103!2.92e-07!69;UBERON:0004876!2.95e-07!20;UBERON:0000483!2.96e-07!309;UBERON:0000119!3.09e-07!312;UBERON:0000487!3.37e-07!22;UBERON:0006554!7.87e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.25e-11;74!UBERON:0001637;5.61e-10;42!UBERON:0003509;5.61e-10;42!UBERON:0004572;5.61e-10;42!UBERON:0007500;6.69e-10;56!UBERON:0001981;6.69e-10;56!UBERON:0004537;6.69e-10;56!UBERON:0000055;9.17e-10;65!UBERON:0004573;1.81e-09;33!UBERON:0004571;1.81e-09;33!UBERON:0006555;2.69e-09;15!UBERON:0004819;2.69e-09;15!UBERON:0001285;2.69e-09;15!UBERON:0007684;2.69e-09;15!UBERON:0002049;5.61e-09;75!UBERON:0007798;5.61e-09;75!UBERON:0000353;2.28e-08;15!UBERON:0001851;4.99e-08;15!UBERON:0004638;1.05e-07;18!UBERON:0001986;1.05e-07;18!UBERON:0004852;1.05e-07;18!UBERON:0001225;1.12e-07;12!UBERON:0008987;1.12e-07;12!UBERON:0006554;2.11e-07;30!UBERON:0001008;2.11e-07;30!UBERON:0000487;3.46e-07;22!UBERON:0004211;3.59e-07;10!UBERON:0009773;3.59e-07;10!UBERON:0001231;3.59e-07;10!UBERON:0004810;3.59e-07;10!UBERON:0001009;6.22e-07;112!UBERON:0002113;6.88e-07;24!UBERON:0011143;6.88e-07;24!UBERON:0004535;7.56e-07;109 | |||
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| ||
|short_description=p1@TMEM8A | |||
}} | }} |
Latest revision as of 16:02, 16 September 2015
Short description: | p1@TMEM8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM8A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000250930, ENST00000382942, ENST00000431232, NM_021259, uc002cgu.3, uc002cgv.3_5end |
EntrezGene: | TMEM8A |
HGNC: | 17205 |
UniProt: | E9PGP3Q9HCN3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.70e-23 | 121 |
embryonic cell | 1.91e-16 | 250 |
endothelial cell | 1.57e-14 | 36 |
meso-epithelial cell | 2.14e-14 | 45 |
smooth muscle cell | 5.84e-14 | 43 |
smooth muscle myoblast | 5.84e-14 | 43 |
muscle precursor cell | 4.11e-12 | 58 |
myoblast | 4.11e-12 | 58 |
multi-potent skeletal muscle stem cell | 4.11e-12 | 58 |
vascular associated smooth muscle cell | 1.52e-11 | 32 |
muscle cell | 1.56e-11 | 55 |
electrically responsive cell | 7.08e-11 | 61 |
electrically active cell | 7.08e-11 | 61 |
lining cell | 3.07e-10 | 58 |
barrier cell | 3.07e-10 | 58 |
endothelial cell of vascular tree | 1.57e-09 | 24 |
epithelial cell of nephron | 2.61e-09 | 15 |
blood vessel endothelial cell | 1.05e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.05e-07 | 18 |
kidney cortical cell | 1.07e-07 | 12 |
renal cortical epithelial cell | 1.07e-07 | 12 |
kidney cell | 2.05e-07 | 17 |
kidney epithelial cell | 2.05e-07 | 17 |
kidney tubule cell | 3.72e-07 | 10 |
nephron tubule epithelial cell | 3.72e-07 | 10 |