FFCP PHASE1:Hg19::chr7:128379449..128379463,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=813 | |EntrezGene=813 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1458 | |HGNC=1458 | ||
|TSSclassifier=strong | |||
|UniProt=O43852 | |UniProt=O43852 | ||
|association_with_transcript=0bp_to_ENST00000479257_5end | |association_with_transcript=0bp_to_ENST00000479257_5end | ||
|cluster_id=chr7:128379449..128379463,+ | |||
|coexpression_cluster_id=C720 | |||
|description=CAGE_peak_2_at_CALU_5end | |description=CAGE_peak_2_at_CALU_5end | ||
|id=chr7:128379449..128379463,+ | |id=chr7:128379449..128379463,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.85e-42!180;CL:0000222!1.56e-22!119;CL:0000057!5.00e-22!75;CL:0000548!1.91e-21!679;CL:0000004!1.91e-21!679;CL:0000255!1.91e-21!679;CL:0000012!1.26e-20!682;CL:0000144!5.54e-20!625;CL:0000680!1.91e-18!57;CL:0000056!1.91e-18!57;CL:0000355!1.91e-18!57;CL:0002371!1.75e-17!591;CL:0000187!2.63e-17!54;CL:0000220!4.94e-16!246;CL:0002321!1.05e-15!248;CL:0000183!1.94e-15!59;CL:0000192!2.03e-15!42;CL:0000514!2.03e-15!42;CL:0000393!5.49e-15!60;CL:0000211!5.49e-15!60;CL:0000359!1.55e-14!32;CL:0000003!4.52e-12!722;CL:0000048!9.17e-12!430;CL:0000723!2.96e-11!436;CL:0002620!6.98e-11!23;CL:0000034!2.01e-10!444;CL:0002494!4.79e-07!16;CL:0002334!9.09e-07!12 | |ontology_enrichment_celltype=CL:0000055!2.85e-42!180;CL:0000222!1.56e-22!119;CL:0000057!5.00e-22!75;CL:0000548!1.91e-21!679;CL:0000004!1.91e-21!679;CL:0000255!1.91e-21!679;CL:0000012!1.26e-20!682;CL:0000144!5.54e-20!625;CL:0000680!1.91e-18!57;CL:0000056!1.91e-18!57;CL:0000355!1.91e-18!57;CL:0002371!1.75e-17!591;CL:0000187!2.63e-17!54;CL:0000220!4.94e-16!246;CL:0002321!1.05e-15!248;CL:0000183!1.94e-15!59;CL:0000192!2.03e-15!42;CL:0000514!2.03e-15!42;CL:0000393!5.49e-15!60;CL:0000211!5.49e-15!60;CL:0000359!1.55e-14!32;CL:0000003!4.52e-12!722;CL:0000048!9.17e-12!430;CL:0000723!2.96e-11!436;CL:0002620!6.98e-11!23;CL:0000034!2.01e-10!444;CL:0002494!4.79e-07!16;CL:0002334!9.09e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.07e-13;32!CL:0000192;3.53e-11;43!CL:0002620;6.54e-11;23!CL:0000187;1.18e-09;55!CL:0000057;2.25e-09;73!CL:0000134;7.42e-09;55!CL:0000723;3.59e-08;61!CL:0000048;4.35e-08;58!CL:0000393;7.41e-08;61!CL:0000211;7.41e-08;61!CL:0002320;3.70e-07;188!CL:0002494;4.59e-07;16!CL:0002334;8.79e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.76e-23,121;CL:0000057,1.27e-22,76;CL:0000680,1.57e-18,58;CL:0000056,1.57e-18,58;CL:0000355,1.57e-18,58;CL:0000187,2.17e-17,55;CL:0002321,4.05e-16,250;CL:0000192,1.76e-15,43;CL:0000514,1.76e-15,43;CL:0000393,4.59e-15,61;CL:0000211,4.59e-15,61;CL:0000359,1.50e-14,32;CL:0000048,5.32e-12,427;CL:0000723,1.75e-11,433;CL:0002620,6.84e-11,23;CL:0000034,1.15e-10,441;CL:0002494,4.73e-07,16;CL:0000213,8.57e-07,58;CL:0000215,8.57e-07,58;CL:0002334,8.98e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;3.53e-11;43!CL:0000355;1.16e-09;58 | |||
|ontology_enrichment_disease=DOID:2394!1.23e-08!14 | |ontology_enrichment_disease=DOID:2394!1.23e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.13e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.21e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.26e-20!83;UBERON:0002329!3.26e-20!83;UBERON:0003077!3.26e-20!83;UBERON:0003059!3.26e-20!83;UBERON:0007282!3.26e-20!83;UBERON:0009618!3.26e-20!83;UBERON:0007285!3.26e-20!83;UBERON:0004872!9.11e-20!84;UBERON:0002049!1.57e-18!79;UBERON:0007798!1.57e-18!79;UBERON:0004290!4.82e-18!70;UBERON:0000486!1.35e-17!82;UBERON:0000055!6.99e-17!69;UBERON:0001981!7.32e-17!60;UBERON:0007500!7.32e-17!60;UBERON:0004537!7.32e-17!60;UBERON:0006965!7.32e-17!60;UBERON:0001637!1.03e-16!42;UBERON:0003509!1.03e-16!42;UBERON:0004572!1.03e-16!42;UBERON:0001134!3.26e-16!61;UBERON:0002036!3.26e-16!61;UBERON:0003082!3.26e-16!61;UBERON:0000490!7.44e-16!138;UBERON:0002385!3.14e-15!63;UBERON:0001015!3.14e-15!63;UBERON:0000383!3.14e-15!63;UBERON:0004535!7.57e-15!110;UBERON:0001009!1.69e-14!113;UBERON:0004573!7.15e-14!33;UBERON:0004571!7.15e-14!33;UBERON:0005256!2.47e-13!143;UBERON:0003914!1.61e-12!118;UBERON:0002199!3.52e-11!45;UBERON:0002416!3.52e-11!45;UBERON:0002097!3.22e-10!40;UBERON:0000947!8.34e-09!21;UBERON:0010191!8.34e-09!21;UBERON:0002100!5.22e-08!216;UBERON:0003102!6.96e-08!95 | |ontology_enrichment_uberon=UBERON:0000914!3.26e-20!83;UBERON:0002329!3.26e-20!83;UBERON:0003077!3.26e-20!83;UBERON:0003059!3.26e-20!83;UBERON:0007282!3.26e-20!83;UBERON:0009618!3.26e-20!83;UBERON:0007285!3.26e-20!83;UBERON:0004872!9.11e-20!84;UBERON:0002049!1.57e-18!79;UBERON:0007798!1.57e-18!79;UBERON:0004290!4.82e-18!70;UBERON:0000486!1.35e-17!82;UBERON:0000055!6.99e-17!69;UBERON:0001981!7.32e-17!60;UBERON:0007500!7.32e-17!60;UBERON:0004537!7.32e-17!60;UBERON:0006965!7.32e-17!60;UBERON:0001637!1.03e-16!42;UBERON:0003509!1.03e-16!42;UBERON:0004572!1.03e-16!42;UBERON:0001134!3.26e-16!61;UBERON:0002036!3.26e-16!61;UBERON:0003082!3.26e-16!61;UBERON:0000490!7.44e-16!138;UBERON:0002385!3.14e-15!63;UBERON:0001015!3.14e-15!63;UBERON:0000383!3.14e-15!63;UBERON:0004535!7.57e-15!110;UBERON:0001009!1.69e-14!113;UBERON:0004573!7.15e-14!33;UBERON:0004571!7.15e-14!33;UBERON:0005256!2.47e-13!143;UBERON:0003914!1.61e-12!118;UBERON:0002199!3.52e-11!45;UBERON:0002416!3.52e-11!45;UBERON:0002097!3.22e-10!40;UBERON:0000947!8.34e-09!21;UBERON:0010191!8.34e-09!21;UBERON:0002100!5.22e-08!216;UBERON:0003102!6.96e-08!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.10e-12;33!UBERON:0004571;1.10e-12;33!UBERON:0001637;3.20e-12;42!UBERON:0003509;3.20e-12;42!UBERON:0004572;3.20e-12;42!UBERON:0007500;9.82e-10;56!UBERON:0001981;9.82e-10;56!UBERON:0004537;9.82e-10;56!UBERON:0000947;8.59e-09;21!UBERON:0010191;8.59e-09;21!UBERON:0000055;1.78e-08;65!UBERON:0002097;3.54e-08;41!UBERON:0002049;3.67e-08;75!UBERON:0007798;3.67e-08;75!UBERON:0002199;2.01e-07;46!UBERON:0002416;2.01e-07;46 | |||
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| ||
|short_description=p2@CALU | |short_description=p2@CALU | ||
}} | }} |
Latest revision as of 03:49, 16 September 2015
Short description: | p2@CALU |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CALU_5end |
Coexpression cluster: | C720_Smooth_Fibroblast_Preadipocyte_Sertoli_Ewing_hepatic_Synoviocyte |
Association with transcript: | 0bp_to_ENST00000479257_5end |
EntrezGene: | CALU |
HGNC: | 1458 |
UniProt: | O43852 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.76e-23 | 121 |
fibroblast | 1.27e-22 | 76 |
muscle precursor cell | 1.57e-18 | 58 |
myoblast | 1.57e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.57e-18 | 58 |
muscle cell | 2.17e-17 | 55 |
embryonic cell | 4.05e-16 | 250 |
smooth muscle cell | 1.76e-15 | 43 |
smooth muscle myoblast | 1.76e-15 | 43 |
electrically responsive cell | 4.59e-15 | 61 |
electrically active cell | 4.59e-15 | 61 |
vascular associated smooth muscle cell | 1.50e-14 | 32 |
multi fate stem cell | 5.32e-12 | 427 |
somatic stem cell | 1.75e-11 | 433 |
skin fibroblast | 6.84e-11 | 23 |
stem cell | 1.15e-10 | 441 |
cardiocyte | 4.73e-07 | 16 |
lining cell | 8.57e-07 | 58 |
barrier cell | 8.57e-07 | 58 |
preadipocyte | 8.98e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.21e-08 | 14 |