FFCP PHASE1:Hg19::chr7:27212374..27212387,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3206 | |EntrezGene=3206 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5100 | |HGNC=5100 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=120bp_to_ENST00000519593,ENST00000521421_5end | |association_with_transcript=120bp_to_ENST00000519593,ENST00000521421_5end | ||
|cluster_id=chr7:27212374..27212387,- | |||
|description=CAGE_peak_12_at_HOXA10_5end | |description=CAGE_peak_12_at_HOXA10_5end | ||
|id=chr7:27212374..27212387,- | |id=chr7:27212374..27212387,- | ||
|ontology_enrichment_celltype=CL:0002620!1.15e-10!23;CL:0000499!1.70e-09!27;CL:0000153!7.92e-09!9;CL:0000447!7.92e-09!9;CL:0000055!2.79e-07!180 | |ontology_enrichment_celltype=CL:0002620!1.15e-10!23;CL:0000499!1.70e-09!27;CL:0000153!7.92e-09!9;CL:0000447!7.92e-09!9;CL:0000055!2.79e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002564;7.36e-26;3!CL:0002537;1.45e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,2.04e-25,3;CL:0002537,2.09e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.20e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003937!3.79e-10!12;UBERON:0005399!3.79e-10!12;UBERON:0002367!1.19e-08!11;UBERON:0010147!1.19e-08!11;UBERON:0009846!1.19e-08!11;UBERON:0003353!1.19e-08!11;UBERON:0004902!1.19e-08!11;UBERON:0003820!1.19e-08!11;UBERON:0009847!1.19e-08!11;UBERON:0004905!1.23e-08!5;UBERON:0000982!1.23e-08!5;UBERON:0004770!1.23e-08!5;UBERON:0003101!2.66e-08!22;UBERON:0000079!2.66e-08!22;UBERON:0000162!3.42e-08!14;UBERON:0001353!3.42e-08!14;UBERON:0000163!3.42e-08!14;UBERON:0006866!3.42e-08!14;UBERON:0000164!3.42e-08!14;UBERON:0000931!3.42e-08!14;UBERON:0004122!1.62e-07!15 | |ontology_enrichment_uberon=UBERON:0003937!3.79e-10!12;UBERON:0005399!3.79e-10!12;UBERON:0002367!1.19e-08!11;UBERON:0010147!1.19e-08!11;UBERON:0009846!1.19e-08!11;UBERON:0003353!1.19e-08!11;UBERON:0004902!1.19e-08!11;UBERON:0003820!1.19e-08!11;UBERON:0009847!1.19e-08!11;UBERON:0004905!1.23e-08!5;UBERON:0000982!1.23e-08!5;UBERON:0004770!1.23e-08!5;UBERON:0003101!2.66e-08!22;UBERON:0000079!2.66e-08!22;UBERON:0000162!3.42e-08!14;UBERON:0001353!3.42e-08!14;UBERON:0000163!3.42e-08!14;UBERON:0006866!3.42e-08!14;UBERON:0000164!3.42e-08!14;UBERON:0000931!3.42e-08!14;UBERON:0004122!1.62e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0011135;4.72e-27;5!UBERON:0002216;4.72e-27;5!UBERON:0011134;4.72e-27;5!UBERON:0002209;4.72e-27;5!UBERON:0002213;4.72e-27;5!UBERON:0007844;4.72e-27;5!UBERON:0011138;4.72e-27;5!UBERON:0001130;4.72e-27;5!UBERON:0001066;4.72e-27;5!UBERON:0001468;4.72e-27;5!UBERON:0002242;7.36e-26;3!UBERON:0004905;5.13e-17;8!UBERON:0000982;5.13e-17;8!UBERON:0004770;5.13e-17;8!UBERON:0004765;5.73e-15;26!UBERON:0000998;1.20e-09;1!UBERON:0007195;1.20e-09;1!UBERON:0006868;1.20e-09;1!UBERON:0000075;1.34e-08;16!UBERON:0001434;1.36e-07;36!UBERON:0002371;9.22e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,9.61e-27,5;UBERON:0002216,9.61e-27,5;UBERON:0011134,9.61e-27,5;UBERON:0002209,9.61e-27,5;UBERON:0002213,9.61e-27,5;UBERON:0005856,9.61e-27,5;UBERON:0005866,9.61e-27,5;UBERON:0005863,9.61e-27,5;UBERON:0007844,9.61e-27,5;UBERON:0011138,9.61e-27,5;UBERON:0001130,9.61e-27,5;UBERON:0001066,9.61e-27,5;UBERON:0001468,9.61e-27,5;UBERON:0002242,2.04e-25,3;UBERON:0003068,2.04e-25,3;UBERON:0002328,2.04e-25,3;UBERON:0004880,2.04e-25,3;UBERON:0004905,7.96e-17,8;UBERON:0000982,7.96e-17,8;UBERON:0004770,7.96e-17,8;UBERON:0000998,7.50e-10,1;UBERON:0006868,7.50e-10,1;UBERON:0007195,1.62e-09,1;UBERON:0000075,1.66e-08,16 | |||
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|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0.866364470720326,1.32558950291166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2529523714611,0,1.01392563272577,0.795285947051099,0.486634870302636,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0.213557388818567,0.211931901159562,0,0.412210116953756,0.257640540045629,0.37223371266318,0.337552664482532,0.487185025805993,0,0.552299391853796,0,1.42003837006646,0.604512589365842,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.330881918197182,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06375246633948,1.04007436911366,1.28603687131071,0,1.3321108950805,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,1.00034104211935,2.17012018959788,0,0,0,0,1.20378439891088,2.27407504055985,0,0,0.368738337083406,0.695068915744663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.459257792658427,0.728364672026868,0.655622074797121,0,0,0,0,0,0,0,0,0,0.812839312631559,0,0,0,0.223874754722178,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0.545999645631943,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0.563391205064483,0.286822704408103,0.392996164052485,0.35667105148125,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0.456469358066384,0,0,0.169291777801603,0,0,0,0,0.921722292925374,0,0.333698283423817,0,0,0,0.270455678475983,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394573622547734,0,1.11136990144637,0,0,0,0,0,0,0,0,0.236387681767936,0,0,1.04174996959975,0,0,0,0,0,0,0,0.139423744278603,1.76985594558733,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,2.28114021073944,0,0,0,0,0.569219092059585,0,0,0,0,0.17472666824203,0.51595809741485,0,0,0,0,0,0,0.137041924646751,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,1.9026588850306,1.77824838730966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.577000469484979,0,0,0.191915197319445,0,0,0,0,0,1.30634944043764,0,0.164185041498678,0.851940108927109,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0.233713309847224,0,0.378806010550178,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796191777397232,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,1.33477682270483,0.39246546425257,0,0,0,0,0,0,0,0.116241425368125,0.347716544605159,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0,0.410651227424988,0,0.485710993059139,0,1.98950775161368,0,0,0,0.150962843566674,0,0,0.470317296361523,0.490296643507811,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0.473314686579554,0,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0.855690109280065,0,0,0,0 | ||
|short_description=p12@HOXA10 | |short_description=p12@HOXA10 | ||
}} | }} |
Latest revision as of 01:48, 18 September 2015
Short description: | p12@HOXA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_HOXA10_5end |
Coexpression cluster: | NA |
Association with transcript: | 120bp_to_ENST00000519593, ENST00000521421_5end |
EntrezGene: | HOXA10 |
HGNC: | 5100 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 2.04e-25 | 3 |
amnion mesenchymal stem cell | 2.09e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 9.61e-27 | 5 |
symphysis | 9.61e-27 | 5 |
nonsynovial joint | 9.61e-27 | 5 |
fibrous joint | 9.61e-27 | 5 |
cartilaginous joint | 9.61e-27 | 5 |
developing mesenchymal condensation | 9.61e-27 | 5 |
pre-cartilage condensation | 9.61e-27 | 5 |
cartilaginous condensation | 9.61e-27 | 5 |
cartilage element | 9.61e-27 | 5 |
post-cranial axial skeletal system | 9.61e-27 | 5 |
vertebral column | 9.61e-27 | 5 |
intervertebral disk | 9.61e-27 | 5 |
intervertebral joint | 9.61e-27 | 5 |
nucleus pulposus | 2.04e-25 | 3 |
axial mesoderm | 2.04e-25 | 3 |
notochord | 2.04e-25 | 3 |
chordamesoderm | 2.04e-25 | 3 |
articulation | 7.96e-17 | 8 |
skeletal joint | 7.96e-17 | 8 |
articular system | 7.96e-17 | 8 |
seminal vesicle | 7.50e-10 | 1 |
seminal fluid secreting gland | 7.50e-10 | 1 |
stroma of bone marrow | 1.62e-09 | 1 |
subdivision of skeletal system | 1.66e-08 | 16 |