FFCP PHASE1:Hg19::chr7:38357069..38357141,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=445347 | |EntrezGene=445347 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-132bp_to_uc003tgg.1,uc003tgh.1,uc003tgi.1,uc003tgj.1_5end | |association_with_transcript=-132bp_to_uc003tgg.1,uc003tgh.1,uc003tgi.1,uc003tgj.1_5end | ||
|cluster_id=chr7:38357069..38357141,- | |||
|coexpression_cluster_id=C1996 | |||
|description=CAGE_peak_1_at_TARP_5end | |description=CAGE_peak_1_at_TARP_5end | ||
|id=chr7:38357069..38357141,- | |id=chr7:38357069..38357141,- | ||
|ontology_enrichment_celltype=CL:0000037!2.34e-24!172;CL:0000566!2.34e-24!172;CL:0000738!5.11e-22!140;CL:0000988!9.98e-22!182;CL:0002032!4.00e-20!165;CL:0000837!4.00e-20!165;CL:0002087!1.54e-19!119;CL:0002031!1.89e-16!124;CL:0000791!3.06e-16!18;CL:0000789!3.06e-16!18;CL:0002420!3.06e-16!18;CL:0002419!3.06e-16!18;CL:0000790!3.06e-16!18;CL:0000625!3.65e-16!11;CL:0000084!2.16e-13!25;CL:0000827!2.16e-13!25;CL:0000763!5.47e-12!112;CL:0000049!5.47e-12!112;CL:0000766!2.79e-11!76;CL:0002057!2.69e-10!42;CL:0000557!1.11e-09!71;CL:0002194!1.65e-09!63;CL:0000576!1.65e-09!63;CL:0000040!1.65e-09!63;CL:0000559!1.65e-09!63;CL:0000860!3.60e-09!45;CL:0000839!4.43e-09!70;CL:0002009!5.67e-09!65;CL:0000838!1.36e-08!52;CL:0000542!2.64e-08!53;CL:0000051!2.64e-08!53 | |ontology_enrichment_celltype=CL:0000037!2.34e-24!172;CL:0000566!2.34e-24!172;CL:0000738!5.11e-22!140;CL:0000988!9.98e-22!182;CL:0002032!4.00e-20!165;CL:0000837!4.00e-20!165;CL:0002087!1.54e-19!119;CL:0002031!1.89e-16!124;CL:0000791!3.06e-16!18;CL:0000789!3.06e-16!18;CL:0002420!3.06e-16!18;CL:0002419!3.06e-16!18;CL:0000790!3.06e-16!18;CL:0000625!3.65e-16!11;CL:0000084!2.16e-13!25;CL:0000827!2.16e-13!25;CL:0000763!5.47e-12!112;CL:0000049!5.47e-12!112;CL:0000766!2.79e-11!76;CL:0002057!2.69e-10!42;CL:0000557!1.11e-09!71;CL:0002194!1.65e-09!63;CL:0000576!1.65e-09!63;CL:0000040!1.65e-09!63;CL:0000559!1.65e-09!63;CL:0000860!3.60e-09!45;CL:0000839!4.43e-09!70;CL:0002009!5.67e-09!65;CL:0000838!1.36e-08!52;CL:0000542!2.64e-08!53;CL:0000051!2.64e-08!53 | ||
|ontology_enrichment_celltype_v019=CL:0000625;3.73e-31;11!CL:0000791;2.13e-29;18!CL:0000789;2.13e-29;18!CL:0002419;2.13e-29;18!CL:0000084;3.10e-23;25!CL:0000623;2.11e-10;3!CL:0000226;5.96e-10;3!CL:0000842;5.96e-10;3!CL:0000767;7.53e-10;3!CL:0000542;6.67e-08;53!CL:0002087;9.55e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,3.54e-31,11;CL:0000791,1.62e-29,18;CL:0000789,1.62e-29,18;CL:0002420,1.62e-29,18;CL:0002419,1.62e-29,18;CL:0000790,1.62e-29,18;CL:0000084,2.60e-23,25;CL:0000827,2.60e-23,25;CL:0000037,3.07e-20,168;CL:0000738,4.56e-19,136;CL:0000988,1.20e-18,177;CL:0002087,8.25e-16,115;CL:0002032,1.79e-14,161;CL:0000837,1.79e-14,161;CL:0000838,3.98e-14,52;CL:0000542,9.06e-14,53;CL:0000051,9.06e-14,53;CL:0002031,2.68e-11,120;CL:0000623,2.11e-10,3;CL:0000825,2.11e-10,3;CL:0000226,6.14e-10,3;CL:0000842,6.14e-10,3;CL:0000767,7.76e-10,3;CL:0000893,3.17e-07,2;CL:0002489,3.17e-07,2;CL:0000809,3.17e-07,2;CL:0000808,3.17e-07,2;CL:0000894,3.17e-07,2;CL:0000806,3.17e-07,2;CL:0000807,3.17e-07,2;CL:0000805,3.17e-07,2;CL:0002425,3.17e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;2.13e-29;18!CL:0000051;6.67e-08;53!CL:0002425;3.16e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.45e-20!102;UBERON:0003061!1.45e-20!102;UBERON:0002193!2.26e-19!112;UBERON:0007023!5.51e-19!115;UBERON:0000178!5.80e-13!15;UBERON:0000179!5.80e-13!15;UBERON:0000463!5.80e-13!15;UBERON:0002405!1.17e-09!115;UBERON:0002371!1.98e-08!80;UBERON:0004177!1.29e-07!7;UBERON:0001474!2.98e-07!86 | |ontology_enrichment_uberon=UBERON:0002390!1.45e-20!102;UBERON:0003061!1.45e-20!102;UBERON:0002193!2.26e-19!112;UBERON:0007023!5.51e-19!115;UBERON:0000178!5.80e-13!15;UBERON:0000179!5.80e-13!15;UBERON:0000463!5.80e-13!15;UBERON:0002405!1.17e-09!115;UBERON:0002371!1.98e-08!80;UBERON:0004177!1.29e-07!7;UBERON:0001474!2.98e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.66e-26;15!UBERON:0000179;4.66e-26;15!UBERON:0000463;4.66e-26;15!UBERON:0002390;1.11e-22;32!UBERON:0002193;3.40e-15;42!UBERON:0004177;4.62e-09;5!UBERON:0005057;4.62e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.79e-26,15;UBERON:0000179,4.79e-26,15;UBERON:0000463,4.79e-26,15;UBERON:0002193,6.39e-18,108;UBERON:0002390,1.09e-17,98;UBERON:0003061,1.09e-17,98;UBERON:0004177,2.57e-14,7;UBERON:0005057,2.57e-14,7;UBERON:0002370,5.05e-12,4;UBERON:0005058,5.05e-12,4;UBERON:0009113,5.05e-12,4;UBERON:0003295,5.05e-12,4;UBERON:0005562,5.05e-12,4;UBERON:0003351,5.30e-08,6;UBERON:0001042,5.98e-07,10;UBERON:0009145,5.98e-07,10 | |||
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| ||
|short_description=p1@TARP | |short_description=p1@TARP | ||
}} | }} |
Latest revision as of 12:28, 18 September 2015
Short description: | p1@TARP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TARP_5end |
Coexpression cluster: | C1996_Natural_CD8_NK_CD4_Peripheral_blood_Whole |
Association with transcript: | -132bp_to_uc003tgg.1, uc003tgh.1, uc003tgi.1, uc003tgj.1_5end |
EntrezGene: | TARP |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 4.79e-26 | 15 |
haemolymphatic fluid | 4.79e-26 | 15 |
organism substance | 4.79e-26 | 15 |
hemolymphoid system | 6.39e-18 | 108 |
hematopoietic system | 1.09e-17 | 98 |
blood island | 1.09e-17 | 98 |
hemopoietic organ | 2.57e-14 | 7 |
immune organ | 2.57e-14 | 7 |
thymus | 5.05e-12 | 4 |
hemolymphoid system gland | 5.05e-12 | 4 |
thymic region | 5.05e-12 | 4 |
pharyngeal gland | 5.05e-12 | 4 |
thymus primordium | 5.05e-12 | 4 |
pharyngeal epithelium | 5.30e-08 | 6 |
chordate pharynx | 5.98e-07 | 10 |
pharyngeal region of foregut | 5.98e-07 | 10 |