FFCP PHASE1:Hg19::chr16:81875671..81875687,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr16:81875671..81875687,+
|short_description=p@chr16:81875671..81875687,+
|description=CAGE_peak_at_chr16:81875671..81875687,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:81875671..81875687,+ | |||
|coexpression_cluster_id=C121 | |||
|description=CAGE_peak_at_chr16:81875671..81875687,+ | |||
|id=chr16:81875671..81875687,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.92e-19!52;CL:0000542!5.55e-19!53;CL:0000051!5.55e-19!53;CL:0000738!2.88e-14!140;CL:0000623!1.16e-11!3;CL:0000825!1.16e-11!3;CL:0000625!4.15e-11!11;CL:0002274!4.34e-11!5;CL:0000457!4.34e-11!5;CL:0002191!4.34e-11!5;CL:0000097!4.34e-11!5;CL:0000831!4.34e-11!5;CL:0002028!4.34e-11!5;CL:0002031!7.38e-11!124;CL:0002087!2.32e-10!119;CL:0000842!2.81e-10!3;CL:0000037!2.85e-10!172;CL:0000566!2.85e-10!172;CL:0000945!7.92e-10!24;CL:0000826!7.92e-10!24;CL:0000988!2.54e-09!182;CL:0000791!8.02e-09!18;CL:0000789!8.02e-09!18;CL:0002420!8.02e-09!18;CL:0002419!8.02e-09!18;CL:0000790!8.02e-09!18;CL:0000224!8.15e-08!4;CL:0002032!1.55e-07!165;CL:0000837!1.55e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0002127;7.47e-30;1!CL:0000911;7.47e-30;1!CL:0000814;7.47e-30;1!CL:0000623;9.43e-11;3!CL:0000542;1.76e-07;53!CL:0000791;2.64e-07;18!CL:0000789;2.64e-07;18!CL:0002419;2.64e-07;18!CL:0000097;5.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,7.48e-30,1;CL:0000914,7.48e-30,1;CL:0000911,7.48e-30,1;CL:0000814,7.48e-30,1;CL:0002042,7.48e-30,1;CL:0002039,7.48e-30,1;CL:0002040,7.48e-30,1;CL:0002041,7.48e-30,1;CL:0000893,1.15e-15,2;CL:0002489,1.15e-15,2;CL:0000809,1.15e-15,2;CL:0000808,1.15e-15,2;CL:0000894,1.15e-15,2;CL:0000806,1.15e-15,2;CL:0000807,1.15e-15,2;CL:0000805,1.15e-15,2;CL:0002425,1.15e-15,2;CL:0000838,5.68e-14,52;CL:0000542,1.03e-13,53;CL:0000051,1.03e-13,53;CL:0000623,9.90e-11,3;CL:0000825,9.90e-11,3;CL:0002031,1.20e-08,120;CL:0000738,1.18e-07,136;CL:0000791,2.52e-07,18;CL:0000789,2.52e-07,18;CL:0002420,2.52e-07,18;CL:0002419,2.52e-07,18;CL:0000790,2.52e-07,18;CL:0000097,6.39e-07,5;CL:0002028,6.39e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002425;1.15e-15;2!CL:0000051;1.76e-07;53!CL:0000790;2.64e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;2.05e-29;1!DOID:74;1.91e-15;2!DOID:1287;2.18e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,9.99e-30,1;DOID:74,1.33e-15,2;DOID:1287,1.82e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.15e-13!15;UBERON:0000179!2.15e-13!15;UBERON:0000463!2.15e-13!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.70e-08,4;UBERON:0005058,1.70e-08,4;UBERON:0009113,1.70e-08,4;UBERON:0003295,1.70e-08,4;UBERON:0005562,1.70e-08,4 | |||
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| ||
|short_description=p@chr16:81875671..81875687,+ | |||
}} | }} |
Latest revision as of 12:45, 25 July 2015
Short description: | p@chr16:81875671..81875687, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:81875671..81875687, + |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 7.48e-30 | 1 |
immature NK T cell | 7.48e-30 | 1 |
effector T cell | 7.48e-30 | 1 |
mature NK T cell | 7.48e-30 | 1 |
immature NK T cell stage IV | 7.48e-30 | 1 |
immature NK T cell stage I | 7.48e-30 | 1 |
immature NK T cell stage II | 7.48e-30 | 1 |
immature NK T cell stage III | 7.48e-30 | 1 |
thymocyte | 1.15e-15 | 2 |
double negative thymocyte | 1.15e-15 | 2 |
double-positive, alpha-beta thymocyte | 1.15e-15 | 2 |
DN4 thymocyte | 1.15e-15 | 2 |
DN1 thymic pro-T cell | 1.15e-15 | 2 |
DN2 thymocyte | 1.15e-15 | 2 |
DN3 thymocyte | 1.15e-15 | 2 |
immature single positive thymocyte | 1.15e-15 | 2 |
early T lineage precursor | 1.15e-15 | 2 |
lymphoid lineage restricted progenitor cell | 5.68e-14 | 52 |
lymphocyte | 1.03e-13 | 53 |
common lymphoid progenitor | 1.03e-13 | 53 |
natural killer cell | 9.90e-11 | 3 |
pro-NK cell | 9.90e-11 | 3 |
hematopoietic lineage restricted progenitor cell | 1.20e-08 | 120 |
leukocyte | 1.18e-07 | 136 |
mature alpha-beta T cell | 2.52e-07 | 18 |
alpha-beta T cell | 2.52e-07 | 18 |
immature T cell | 2.52e-07 | 18 |
mature T cell | 2.52e-07 | 18 |
immature alpha-beta T cell | 2.52e-07 | 18 |
mast cell | 6.39e-07 | 5 |
basophil mast progenitor cell | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.70e-08 | 4 |
hemolymphoid system gland | 1.70e-08 | 4 |
thymic region | 1.70e-08 | 4 |
pharyngeal gland | 1.70e-08 | 4 |
thymus primordium | 1.70e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
anemia | 9.99e-30 | 1 |
hematopoietic system disease | 1.33e-15 | 2 |
cardiovascular system disease | 1.82e-08 | 4 |