FFCP PHASE1:Hg19::chr11:47470657..47470674,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5913 | |EntrezGene=5913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9863 | |HGNC=9863 | ||
|TSSclassifier=strong | |||
|UniProt=E9PK11 | |UniProt=E9PK11 | ||
|association_with_transcript=13bp_to_ENST00000529341_5end | |association_with_transcript=13bp_to_ENST00000529341_5end | ||
|cluster_id=chr11:47470657..47470674,- | |||
|coexpression_cluster_id=C737 | |||
|description=CAGE_peak_2_at_RAPSN_5end | |description=CAGE_peak_2_at_RAPSN_5end | ||
|id=chr11:47470657..47470674,- | |id=chr11:47470657..47470674,- | ||
|ontology_enrichment_celltype=CL:0000188!1.63e-47!9;CL:0000515!1.31e-22!4;CL:0000680!4.62e-18!57;CL:0000056!4.62e-18!57;CL:0000355!4.62e-18!57;CL:0000594!1.79e-16!3;CL:0000183!9.78e-13!59;CL:0000187!6.68e-12!54;CL:0000393!1.79e-10!60;CL:0000211!1.79e-10!60;CL:0000222!3.86e-08!119;CL:0002242!5.43e-07!1;CL:0000228!5.43e-07!1;CL:0002372!5.43e-07!1 | |ontology_enrichment_celltype=CL:0000188!1.63e-47!9;CL:0000515!1.31e-22!4;CL:0000680!4.62e-18!57;CL:0000056!4.62e-18!57;CL:0000355!4.62e-18!57;CL:0000594!1.79e-16!3;CL:0000183!9.78e-13!59;CL:0000187!6.68e-12!54;CL:0000393!1.79e-10!60;CL:0000211!1.79e-10!60;CL:0000222!3.86e-08!119;CL:0002242!5.43e-07!1;CL:0000228!5.43e-07!1;CL:0002372!5.43e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000056;2.82e-42;4!CL:0000188;1.11e-41;9!CL:0000680;2.62e-37;7!CL:0000515;5.08e-32;3!CL:0000228;4.53e-12;1!CL:0002372;4.53e-12;1!CL:0002321;1.67e-11;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,2.28e-42,4;CL:0000188,1.19e-41,9;CL:0000680,1.50e-13,58;CL:0000056,1.50e-13,58;CL:0000355,1.50e-13,58;CL:0000228,4.53e-12,1;CL:0002372,4.53e-12,1;CL:0000222,2.76e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000515;2.82e-42;4!CL:0000355;7.76e-10;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!8.44e-25!61;UBERON:0002036!8.44e-25!61;UBERON:0003082!8.44e-25!61;UBERON:0002385!6.95e-24!63;UBERON:0001015!6.95e-24!63;UBERON:0000383!6.95e-24!63;UBERON:0004290!4.30e-21!70;UBERON:0000486!2.03e-17!82;UBERON:0000914!3.68e-17!83;UBERON:0002329!3.68e-17!83;UBERON:0003077!3.68e-17!83;UBERON:0003059!3.68e-17!83;UBERON:0007282!3.68e-17!83;UBERON:0009618!3.68e-17!83;UBERON:0007285!3.68e-17!83;UBERON:0000490!6.34e-14!138;UBERON:0000341!1.80e-11!2;UBERON:0005256!1.16e-10!143;UBERON:0002204!1.91e-08!167;UBERON:0008814!2.10e-08!15;UBERON:0001723!3.95e-08!3;UBERON:0001033!3.95e-08!3;UBERON:0010056!3.95e-08!3;UBERON:0003104!8.75e-08!238;UBERON:0009142!8.75e-08!238;UBERON:0005418!6.80e-07!1;UBERON:0001389!6.80e-07!1;UBERON:0000026!6.80e-07!1;UBERON:0008784!6.80e-07!1;UBERON:0006058!6.80e-07!1;UBERON:0003663!6.80e-07!1;UBERON:0001383!6.80e-07!1;UBERON:0004256!6.80e-07!1;UBERON:0002529!6.80e-07!1;UBERON:0004708!6.80e-07!1;UBERON:0002101!6.80e-07!1;UBERON:0004709!6.80e-07!1;UBERON:0003661!6.80e-07!1;UBERON:0002471!6.80e-07!1;UBERON:0004357!6.80e-07!1;UBERON:0009872!6.80e-07!1;UBERON:0004347!6.80e-07!1;UBERON:0005420!6.80e-07!1;UBERON:0005732!6.80e-07!1;UBERON:0006057!6.80e-07!1;UBERON:0000978!6.80e-07!1;UBERON:0002103!6.80e-07!1;UBERON:0001665!6.80e-07!1;UBERON:0003823!6.80e-07!1;UBERON:0000154!6.80e-07!1;UBERON:0005733!6.80e-07!1;UBERON:0005730!6.80e-07!1 | |ontology_enrichment_uberon=UBERON:0001134!8.44e-25!61;UBERON:0002036!8.44e-25!61;UBERON:0003082!8.44e-25!61;UBERON:0002385!6.95e-24!63;UBERON:0001015!6.95e-24!63;UBERON:0000383!6.95e-24!63;UBERON:0004290!4.30e-21!70;UBERON:0000486!2.03e-17!82;UBERON:0000914!3.68e-17!83;UBERON:0002329!3.68e-17!83;UBERON:0003077!3.68e-17!83;UBERON:0003059!3.68e-17!83;UBERON:0007282!3.68e-17!83;UBERON:0009618!3.68e-17!83;UBERON:0007285!3.68e-17!83;UBERON:0000490!6.34e-14!138;UBERON:0000341!1.80e-11!2;UBERON:0005256!1.16e-10!143;UBERON:0002204!1.91e-08!167;UBERON:0008814!2.10e-08!15;UBERON:0001723!3.95e-08!3;UBERON:0001033!3.95e-08!3;UBERON:0010056!3.95e-08!3;UBERON:0003104!8.75e-08!238;UBERON:0009142!8.75e-08!238;UBERON:0005418!6.80e-07!1;UBERON:0001389!6.80e-07!1;UBERON:0000026!6.80e-07!1;UBERON:0008784!6.80e-07!1;UBERON:0006058!6.80e-07!1;UBERON:0003663!6.80e-07!1;UBERON:0001383!6.80e-07!1;UBERON:0004256!6.80e-07!1;UBERON:0002529!6.80e-07!1;UBERON:0004708!6.80e-07!1;UBERON:0002101!6.80e-07!1;UBERON:0004709!6.80e-07!1;UBERON:0003661!6.80e-07!1;UBERON:0002471!6.80e-07!1;UBERON:0004357!6.80e-07!1;UBERON:0009872!6.80e-07!1;UBERON:0004347!6.80e-07!1;UBERON:0005420!6.80e-07!1;UBERON:0005732!6.80e-07!1;UBERON:0006057!6.80e-07!1;UBERON:0000978!6.80e-07!1;UBERON:0002103!6.80e-07!1;UBERON:0001665!6.80e-07!1;UBERON:0003823!6.80e-07!1;UBERON:0000154!6.80e-07!1;UBERON:0005733!6.80e-07!1;UBERON:0005730!6.80e-07!1 | ||
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|short_description=p2@RAPSN | |short_description=p2@RAPSN | ||
}} | }} |
Latest revision as of 05:31, 18 September 2015
Short description: | p2@RAPSN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAPSN_5end |
Coexpression cluster: | C737_rhabdomyosarcoma_skeletal_mesenchymal_Skeletal_Pericytes_tongue_diaphragm |
Association with transcript: | 13bp_to_ENST00000529341_5end |
EntrezGene: | RAPSN |
HGNC: | 9863 |
UniProt: | E9PK11 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 2.28e-42 | 4 |
cell of skeletal muscle | 1.19e-41 | 9 |
muscle precursor cell | 1.50e-13 | 58 |
myoblast | 1.50e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.50e-13 | 58 |
multinucleate cell | 4.53e-12 | 1 |
myotube | 4.53e-12 | 1 |
mesodermal cell | 2.76e-07 | 121 |