FFCP PHASE1:Hg19::chr16:86632977..86632980,+: Difference between revisions
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|id=chr16:86632977..86632980,+
|short_description=p@chr16:86632977..86632980,+
|description=CAGE_peak_at_chr16:86632977..86632980,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:86632977..86632980,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr16:86632977..86632980,+ | |||
|id=chr16:86632977..86632980,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.27e-42!42;CL:0000860!8.57e-39!45;CL:0002194!2.96e-26!63;CL:0000576!2.96e-26!63;CL:0000040!2.96e-26!63;CL:0000559!2.96e-26!63;CL:0002009!2.36e-25!65;CL:0000839!2.52e-23!70;CL:0000557!5.93e-23!71;CL:0000766!3.08e-21!76;CL:0002087!4.83e-14!119;CL:0000763!2.27e-13!112;CL:0000049!2.27e-13!112;CL:0002031!2.46e-13!124;CL:0000738!2.08e-11!140;CL:0002032!3.81e-09!165;CL:0000837!3.81e-09!165;CL:0000988!4.31e-09!182;CL:0000037!1.25e-08!172;CL:0000566!1.25e-08!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.78e-32;33!CL:0002057;2.78e-32;33!CL:0000473;3.57e-23;39!CL:0000234;3.57e-23;39!CL:0000576;3.33e-13;48!CL:0002595;3.65e-13;5!CL:0000766;6.20e-12;69!CL:0002589;5.49e-09;2!CL:0002593;7.49e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.90e-29,42;CL:0002057,9.90e-29,42;CL:0000473,4.65e-25,48;CL:0000234,4.65e-25,48;CL:0002194,6.54e-20,59;CL:0000576,6.54e-20,59;CL:0000040,6.54e-20,59;CL:0000559,6.54e-20,59;CL:0002009,3.03e-19,61;CL:0000839,9.36e-18,66;CL:0000557,1.75e-17,67;CL:0000766,3.10e-16,72;CL:0002595,3.65e-13,5;CL:0000763,1.31e-10,108;CL:0000049,1.31e-10,108;CL:0002087,6.45e-10,115;CL:0002031,1.80e-09,120;CL:0002589,5.94e-09,2;CL:0002593,7.49e-09,2;CL:0000738,2.91e-08,136;CL:0000988,1.20e-07,177;CL:0002032,7.59e-07,161;CL:0000837,7.59e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;1.21e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.11e-20!80;UBERON:0001474!2.13e-18!86;UBERON:0003081!1.59e-15!216;UBERON:0004765!3.49e-15!101;UBERON:0001434!3.49e-15!101;UBERON:0002390!5.29e-15!102;UBERON:0003061!5.29e-15!102;UBERON:0002193!2.27e-13!112;UBERON:0002204!4.54e-13!167;UBERON:0002405!6.19e-13!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;3.65e-13;5!UBERON:0001533;3.65e-13;5!UBERON:0003513;1.13e-09;7!UBERON:0001529;5.49e-09;2!UBERON:0007204;5.49e-09;2!UBERON:0002456;7.49e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.37e-15,76;UBERON:0001474,3.47e-14,82;UBERON:0003834,3.65e-13,5;UBERON:0001533,3.65e-13,5;UBERON:0004765,7.19e-13,90;UBERON:0002405,1.96e-12,93;UBERON:0002204,4.74e-12,167;UBERON:0002390,9.17e-12,98;UBERON:0003061,9.17e-12,98;UBERON:0003081,1.45e-11,203;UBERON:0001434,1.63e-11,100;UBERON:0002193,1.31e-10,108;UBERON:0003513,1.13e-09,7;UBERON:0001529,5.94e-09,2;UBERON:0007204,5.94e-09,2;UBERON:0002456,7.49e-09,2;UBERON:0000926,5.11e-07,315;UBERON:0004120,5.11e-07,315;UBERON:0006603,5.11e-07,315 | |||
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|short_description=p@chr16:86632977..86632980,+ | |||
}} | }} |
Latest revision as of 13:08, 25 July 2015
Short description: | p@chr16:86632977..86632980, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:86632977..86632980, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.90e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.90e-29 | 42 |
defensive cell | 4.65e-25 | 48 |
phagocyte | 4.65e-25 | 48 |
monopoietic cell | 6.54e-20 | 59 |
monocyte | 6.54e-20 | 59 |
monoblast | 6.54e-20 | 59 |
promonocyte | 6.54e-20 | 59 |
macrophage dendritic cell progenitor | 3.03e-19 | 61 |
myeloid lineage restricted progenitor cell | 9.36e-18 | 66 |
granulocyte monocyte progenitor cell | 1.75e-17 | 67 |
myeloid leukocyte | 3.10e-16 | 72 |
smooth muscle cell of the subclavian artery | 3.65e-13 | 5 |
myeloid cell | 1.31e-10 | 108 |
common myeloid progenitor | 1.31e-10 | 108 |
nongranular leukocyte | 6.45e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.80e-09 | 120 |
smooth muscle cell of the brachiocephalic vasculature | 5.94e-09 | 2 |
smooth muscle cell of the internal thoracic artery | 7.49e-09 | 2 |
leukocyte | 2.91e-08 | 136 |
hematopoietic cell | 1.20e-07 | 177 |
hematopoietic oligopotent progenitor cell | 7.59e-07 | 161 |
hematopoietic multipotent progenitor cell | 7.59e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.37e-15 | 76 |
bone element | 3.47e-14 | 82 |
thoracic segment blood vessel | 3.65e-13 | 5 |
subclavian artery | 3.65e-13 | 5 |
skeletal element | 7.19e-13 | 90 |
immune system | 1.96e-12 | 93 |
musculoskeletal system | 4.74e-12 | 167 |
hematopoietic system | 9.17e-12 | 98 |
blood island | 9.17e-12 | 98 |
lateral plate mesoderm | 1.45e-11 | 203 |
skeletal system | 1.63e-11 | 100 |
hemolymphoid system | 1.31e-10 | 108 |
trunk blood vessel | 1.13e-09 | 7 |
brachiocephalic artery | 5.94e-09 | 2 |
brachiocephalic vasculature | 5.94e-09 | 2 |
internal thoracic artery | 7.49e-09 | 2 |
mesoderm | 5.11e-07 | 315 |
mesoderm-derived structure | 5.11e-07 | 315 |
presumptive mesoderm | 5.11e-07 | 315 |