FFCP PHASE1:Hg19::chr9:120466493..120466510,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7099 | |EntrezGene=7099 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11850 | |HGNC=11850 | ||
|TSSclassifier=strong | |||
|UniProt=D1CS53,O00206 | |UniProt=D1CS53,O00206 | ||
|association_with_transcript=33bp_to_NM_138554,NR_024168,NR_024169,uc004bjz.2,uc004bka.2,uc004bkb.2_5end | |association_with_transcript=33bp_to_NM_138554,NR_024168,NR_024169,uc004bjz.2,uc004bka.2,uc004bkb.2_5end | ||
|cluster_id=chr9:120466493..120466510,+ | |||
|description=CAGE_peak_5_at_TLR4_5end | |description=CAGE_peak_5_at_TLR4_5end | ||
|id=chr9:120466493..120466510,+ | |id=chr9:120466493..120466510,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.22e-13!42;CL:0000860!1.18e-12!45;CL:0000766!2.67e-12!76;CL:0002194!9.06e-10!63;CL:0000576!9.06e-10!63;CL:0000040!9.06e-10!63;CL:0000559!9.06e-10!63;CL:0000839!5.50e-09!70;CL:0002009!7.63e-09!65;CL:0000557!1.44e-08!71 | |ontology_enrichment_celltype=CL:0002057!3.22e-13!42;CL:0000860!1.18e-12!45;CL:0000766!2.67e-12!76;CL:0002194!9.06e-10!63;CL:0000576!9.06e-10!63;CL:0000040!9.06e-10!63;CL:0000559!9.06e-10!63;CL:0000839!5.50e-09!70;CL:0002009!7.63e-09!65;CL:0000557!1.44e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.48e-18;33!CL:0002057;1.48e-18;33!CL:0000473;3.25e-13;39!CL:0000234;3.25e-13;39!CL:0000576;2.38e-07;48!CL:0002334;3.62e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.23e-15,42;CL:0002057,7.23e-15,42;CL:0000473,1.14e-12,48;CL:0000234,1.14e-12,48;CL:0000766,8.52e-10,72;CL:0002194,2.98e-08,59;CL:0000576,2.98e-08,59;CL:0000040,2.98e-08,59;CL:0000559,2.98e-08,59;CL:0002009,1.28e-07,61;CL:0000839,1.96e-07,66;CL:0000557,3.71e-07,67;CL:0002334,4.42e-07,12;CL:0000136,8.12e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;3.11e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.65e-22!115;UBERON:0002616!1.20e-14!59;UBERON:0000955!3.87e-14!69;UBERON:0006238!3.87e-14!69;UBERON:0001049!1.25e-13!57;UBERON:0005068!1.25e-13!57;UBERON:0006241!1.25e-13!57;UBERON:0007135!1.25e-13!57;UBERON:0005743!1.48e-12!86;UBERON:0001017!1.71e-12!82;UBERON:0003075!1.33e-11!86;UBERON:0007284!1.33e-11!86;UBERON:0002390!3.77e-10!102;UBERON:0003061!3.77e-10!102;UBERON:0002193!4.48e-10!112;UBERON:0003080!4.98e-10!42;UBERON:0000073!6.35e-10!94;UBERON:0001016!6.35e-10!94;UBERON:0002346!6.62e-10!90;UBERON:0000467!7.91e-10!625;UBERON:0002780!9.34e-10!41;UBERON:0001890!9.34e-10!41;UBERON:0006240!9.34e-10!41;UBERON:0000480!1.23e-09!626;UBERON:0000468!1.30e-09!659;UBERON:0001893!4.93e-09!34;UBERON:0002020!5.07e-09!34;UBERON:0003528!5.07e-09!34;UBERON:0002371!5.98e-09!80;UBERON:0002791!1.17e-08!33;UBERON:0003056!1.30e-08!61;UBERON:0002204!1.64e-08!167;UBERON:0001474!2.65e-08!86;UBERON:0001869!4.12e-08!32;UBERON:0004765!1.71e-07!101;UBERON:0001434!1.71e-07!101;UBERON:0000923!2.66e-07!604;UBERON:0005291!2.66e-07!604;UBERON:0006598!2.66e-07!604;UBERON:0002532!2.66e-07!604;UBERON:0002050!3.85e-07!605;UBERON:0005423!3.85e-07!605;UBERON:0000479!9.86e-07!787 | |ontology_enrichment_uberon=UBERON:0007023!7.65e-22!115;UBERON:0002616!1.20e-14!59;UBERON:0000955!3.87e-14!69;UBERON:0006238!3.87e-14!69;UBERON:0001049!1.25e-13!57;UBERON:0005068!1.25e-13!57;UBERON:0006241!1.25e-13!57;UBERON:0007135!1.25e-13!57;UBERON:0005743!1.48e-12!86;UBERON:0001017!1.71e-12!82;UBERON:0003075!1.33e-11!86;UBERON:0007284!1.33e-11!86;UBERON:0002390!3.77e-10!102;UBERON:0003061!3.77e-10!102;UBERON:0002193!4.48e-10!112;UBERON:0003080!4.98e-10!42;UBERON:0000073!6.35e-10!94;UBERON:0001016!6.35e-10!94;UBERON:0002346!6.62e-10!90;UBERON:0000467!7.91e-10!625;UBERON:0002780!9.34e-10!41;UBERON:0001890!9.34e-10!41;UBERON:0006240!9.34e-10!41;UBERON:0000480!1.23e-09!626;UBERON:0000468!1.30e-09!659;UBERON:0001893!4.93e-09!34;UBERON:0002020!5.07e-09!34;UBERON:0003528!5.07e-09!34;UBERON:0002371!5.98e-09!80;UBERON:0002791!1.17e-08!33;UBERON:0003056!1.30e-08!61;UBERON:0002204!1.64e-08!167;UBERON:0001474!2.65e-08!86;UBERON:0001869!4.12e-08!32;UBERON:0004765!1.71e-07!101;UBERON:0001434!1.71e-07!101;UBERON:0000923!2.66e-07!604;UBERON:0005291!2.66e-07!604;UBERON:0006598!2.66e-07!604;UBERON:0002532!2.66e-07!604;UBERON:0002050!3.85e-07!605;UBERON:0005423!3.85e-07!605;UBERON:0000479!9.86e-07!787 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.29e-09;34!UBERON:0003528;8.35e-09;34!UBERON:0002020;8.35e-09;34!UBERON:0002791;1.37e-08;32!UBERON:0001869;1.93e-08;32!UBERON:0001017;2.09e-08;75!UBERON:0002780;2.22e-08;41!UBERON:0001890;2.22e-08;41!UBERON:0000073;2.52e-08;53!UBERON:0002616;2.52e-08;53!UBERON:0002619;1.76e-07;22!UBERON:0000955;4.55e-07;68!UBERON:0000125;4.95e-07;9!UBERON:0002308;4.95e-07;9 | |||
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| ||
|short_description=p5@TLR4 | |short_description=p5@TLR4 | ||
}} | }} |
Latest revision as of 18:46, 24 September 2015
Short description: | p5@TLR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TLR4_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_NM_138554, NR_024168, NR_024169, uc004bjz.2, uc004bka.2, uc004bkb.2_5end |
EntrezGene: | TLR4 |
HGNC: | 11850 |
UniProt: | D1CS53O00206 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.23e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.23e-15 | 42 |
defensive cell | 1.14e-12 | 48 |
phagocyte | 1.14e-12 | 48 |
myeloid leukocyte | 8.52e-10 | 72 |
monopoietic cell | 2.98e-08 | 59 |
monocyte | 2.98e-08 | 59 |
monoblast | 2.98e-08 | 59 |
promonocyte | 2.98e-08 | 59 |
macrophage dendritic cell progenitor | 1.28e-07 | 61 |
myeloid lineage restricted progenitor cell | 1.96e-07 | 66 |
granulocyte monocyte progenitor cell | 3.71e-07 | 67 |
preadipocyte | 4.42e-07 | 12 |
fat cell | 8.12e-07 | 15 |