FFCP PHASE1:Hg19::chr9:14910387..14910398,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=158326 | |EntrezGene=158326 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23399 | |HGNC=23399 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000380880_5end | |association_with_transcript=29bp_to_ENST00000380880_5end | ||
|cluster_id=chr9:14910387..14910398,- | |||
|coexpression_cluster_id=C1288 | |||
|description=CAGE_peak_10_at_FREM1_5end | |description=CAGE_peak_10_at_FREM1_5end | ||
|id=chr9:14910387..14910398,- | |id=chr9:14910387..14910398,- | ||
|ontology_enrichment_celltype=CL:0002274!8.72e-08!5;CL:0000457!8.72e-08!5;CL:0002191!8.72e-08!5;CL:0000097!8.72e-08!5;CL:0000831!8.72e-08!5;CL:0002028!8.72e-08!5 | |ontology_enrichment_celltype=CL:0002274!8.72e-08!5;CL:0000457!8.72e-08!5;CL:0002191!8.72e-08!5;CL:0000097!8.72e-08!5;CL:0000831!8.72e-08!5;CL:0002028!8.72e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.85e-11;5!CL:0000163;9.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.68e-11,5;CL:0002028,2.68e-11,5 | |||
|ontology_enrichment_development_v019=UBERON:0004140;8.17e-15;1!UBERON:0004872;1.53e-08;7!UBERON:0006965;7.03e-08;2!UBERON:0007297;7.03e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.20e-39!115;UBERON:0002346!3.23e-13!90;UBERON:0001049!5.01e-12!57;UBERON:0005068!5.01e-12!57;UBERON:0006241!5.01e-12!57;UBERON:0007135!5.01e-12!57;UBERON:0003075!1.19e-10!86;UBERON:0007284!1.19e-10!86;UBERON:0003076!2.50e-10!15;UBERON:0003057!2.50e-10!15;UBERON:0005743!1.97e-09!86;UBERON:0001017!3.07e-09!82;UBERON:0002616!5.06e-09!59;UBERON:0000073!8.76e-09!94;UBERON:0001016!8.76e-09!94;UBERON:0004733!5.04e-08!12;UBERON:0002028!5.04e-08!12;UBERON:0007277!5.04e-08!12;UBERON:0006947!6.57e-08!3;UBERON:0004054!6.57e-08!3;UBERON:0004732!2.53e-07!13;UBERON:0001893!2.96e-07!34;UBERON:0002020!3.00e-07!34;UBERON:0003528!3.00e-07!34;UBERON:0000955!6.57e-07!69;UBERON:0006238!6.57e-07!69 | |ontology_enrichment_uberon=UBERON:0007023!4.20e-39!115;UBERON:0002346!3.23e-13!90;UBERON:0001049!5.01e-12!57;UBERON:0005068!5.01e-12!57;UBERON:0006241!5.01e-12!57;UBERON:0007135!5.01e-12!57;UBERON:0003075!1.19e-10!86;UBERON:0007284!1.19e-10!86;UBERON:0003076!2.50e-10!15;UBERON:0003057!2.50e-10!15;UBERON:0005743!1.97e-09!86;UBERON:0001017!3.07e-09!82;UBERON:0002616!5.06e-09!59;UBERON:0000073!8.76e-09!94;UBERON:0001016!8.76e-09!94;UBERON:0004733!5.04e-08!12;UBERON:0002028!5.04e-08!12;UBERON:0007277!5.04e-08!12;UBERON:0006947!6.57e-08!3;UBERON:0004054!6.57e-08!3;UBERON:0004732!2.53e-07!13;UBERON:0001893!2.96e-07!34;UBERON:0002020!3.00e-07!34;UBERON:0003528!3.00e-07!34;UBERON:0000955!6.57e-07!69;UBERON:0006238!6.57e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;6.21e-15;1!UBERON:0006834;8.17e-15;1!UBERON:0001301;1.84e-14;1!UBERON:0002346;2.33e-14;4!UBERON:0000923;2.33e-14;4!UBERON:0010316;2.33e-14;4!UBERON:0005291;2.33e-14;4!UBERON:0002050;1.12e-11;5!UBERON:0005423;1.12e-11;5!UBERON:0000922;1.75e-09;49!UBERON:0003127;7.03e-08;2!UBERON:0002702;7.03e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,6.22e-15,1;UBERON:0006834,7.13e-15,1;UBERON:0001301,2.11e-14,1;UBERON:0002702,5.74e-08,2;UBERON:0003127,6.15e-08,2 | |||
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| ||
|short_description=p10@FREM1 | |short_description=p10@FREM1 | ||
}} | }} |
Latest revision as of 18:45, 16 September 2015
Short description: | p10@FREM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_FREM1_5end |
Coexpression cluster: | C1288_kidney_neuroectodermal_uterus_Mast_skin_rhabdomyosarcoma_ductus |
Association with transcript: | 29bp_to_ENST00000380880_5end |
EntrezGene: | FREM1 |
HGNC: | 23399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.68e-11 | 5 |
basophil mast progenitor cell | 2.68e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
surface | 6.22e-15 | 1 |
uterus or analog | 7.13e-15 | 1 |
epididymis | 2.11e-14 | 1 |
middle frontal gyrus | 5.74e-08 | 2 |
open tracheal system trachea | 6.15e-08 | 2 |