FFCP PHASE1:Hg19::chr15:40531729..40531738,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56924 | |EntrezGene=56924 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16061 | |HGNC=16061 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=108bp_to_ENST00000560346_5end | |association_with_transcript=108bp_to_ENST00000560346_5end | ||
|cluster_id=chr15:40531729..40531738,+ | |||
|coexpression_cluster_id=C234 | |||
|description=CAGE_peak_15_at_PAK6_5end | |description=CAGE_peak_15_at_PAK6_5end | ||
|id=chr15:40531729..40531738,+ | |id=chr15:40531729..40531738,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.54e-12!43;CL:0002251!1.42e-11!21;CL:0000223!1.17e-10!59;CL:0002159!4.06e-10!13;CL:0002621!6.12e-10!3;CL:0002166!2.27e-09!3;CL:0002327!7.35e-07!4 | |ontology_enrichment_celltype=CL:0002076!1.54e-12!43;CL:0002251!1.42e-11!21;CL:0000223!1.17e-10!59;CL:0002159!4.06e-10!13;CL:0002621!6.12e-10!3;CL:0002166!2.27e-09!3;CL:0002327!7.35e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002621;4.68e-66;3!CL:0002251;4.25e-23;20!CL:0002076;2.07e-10;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,3.35e-66,3;CL:0002251,3.95e-23,20;CL:0002076,1.56e-11,42;CL:0000223,1.35e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0010122;7.14e-26;2!CL:0000223;5.84e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001949;4.68e-66;3!UBERON:0003729;6.32e-35;13!UBERON:0003929;4.21e-29;7!UBERON:0001873;7.14e-26;2!UBERON:0003350;1.26e-25;8!UBERON:0001828;1.26e-25;8!UBERON:0000161;2.96e-24;19!UBERON:0000166;2.96e-24;19!UBERON:0000344;4.25e-23;20!UBERON:0005383;9.45e-18;3!UBERON:0005382;9.45e-18;3!UBERON:0000486;1.71e-17;12!UBERON:0000165;8.49e-17;28!UBERON:0003343;8.81e-14;4!UBERON:0004785;8.81e-14;4!UBERON:0000369;1.13e-13;4!UBERON:0002435;1.13e-13;4!UBERON:0000204;1.13e-13;4!UBERON:0004807;4.74e-10;22!UBERON:0000974;1.22e-09;6!UBERON:0004923;4.08e-09;55!UBERON:0009663;2.18e-08;7!UBERON:0001555;5.53e-08;54!UBERON:0010371;1.21e-07;31!UBERON:0001444;7.93e-07;48!UBERON:0002420;8.37e-07;9!UBERON:0000125;8.37e-07;9!UBERON:0007245;8.37e-07;9!UBERON:0002308;8.37e-07;9!UBERON:0010009;8.37e-07;9!UBERON:0010011;8.37e-07;9!UBERON:0000454;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.35e-66,3;UBERON:0003729,5.63e-35,13;UBERON:0001873,9.18e-26,2;UBERON:0010122,9.18e-26,2;UBERON:0003350,1.11e-25,8;UBERON:0001828,1.11e-25,8;UBERON:0000344,3.95e-23,20;UBERON:0000166,3.99e-21,22;UBERON:0005383,1.12e-17,3;UBERON:0005382,1.12e-17,3;UBERON:0000165,2.82e-16,29;UBERON:0000930,2.82e-16,29;UBERON:0003343,8.82e-14,4;UBERON:0004785,8.82e-14,4;UBERON:0000369,1.29e-13,4;UBERON:0002435,1.29e-13,4;UBERON:0000204,1.29e-13,4;UBERON:0010082,1.29e-13,4;UBERON:0000161,2.66e-13,36;UBERON:0001444,5.14e-10,49;UBERON:0000033,7.15e-09,56;UBERON:0009663,2.35e-08,7;UBERON:0004807,3.92e-08,28;UBERON:0000153,4.28e-08,62;UBERON:0007811,4.28e-08,62;UBERON:0004923,1.18e-07,66;UBERON:0001004,6.51e-07,74;UBERON:0002420,8.85e-07,9;UBERON:0000125,8.85e-07,9;UBERON:0007245,8.85e-07,9;UBERON:0002308,8.85e-07,9;UBERON:0010009,8.85e-07,9;UBERON:0010011,8.85e-07,9;UBERON:0000454,8.85e-07,9 | |||
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| ||
|short_description=p15@PAK6 | |short_description=p15@PAK6 | ||
}} | }} |
Latest revision as of 12:49, 17 September 2015
Short description: | p15@PAK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_PAK6_5end |
Coexpression cluster: | C234_oral_epidermoid_malignant_cervical_ductal_lung_keratoacanthoma |
Association with transcript: | 108bp_to_ENST00000560346_5end |
EntrezGene: | PAK6 |
HGNC: | 16061 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 3.35e-66 | 3 |
epithelial cell of alimentary canal | 3.95e-23 | 20 |
endo-epithelial cell | 1.56e-11 | 42 |
endodermal cell | 1.35e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 3.35e-66 | 3 |
mouth mucosa | 5.63e-35 | 13 |
caudate nucleus | 9.18e-26 | 2 |
future caudate nucleus | 9.18e-26 | 2 |
epithelium of mucosa | 1.11e-25 | 8 |
gingiva | 1.11e-25 | 8 |
mucosa | 3.95e-23 | 20 |
oral opening | 3.99e-21 | 22 |
caudate-putamen | 1.12e-17 | 3 |
dorsal striatum | 1.12e-17 | 3 |
mouth | 2.82e-16 | 29 |
stomodeum | 2.82e-16 | 29 |
mucosa of oral region | 8.82e-14 | 4 |
respiratory system mucosa | 8.82e-14 | 4 |
corpus striatum | 1.29e-13 | 4 |
striatum | 1.29e-13 | 4 |
ventral part of telencephalon | 1.29e-13 | 4 |
future corpus striatum | 1.29e-13 | 4 |
orifice | 2.66e-13 | 36 |
subdivision of head | 5.14e-10 | 49 |
head | 7.15e-09 | 56 |
telencephalic nucleus | 2.35e-08 | 7 |
respiratory system epithelium | 3.92e-08 | 28 |
anterior region of body | 4.28e-08 | 62 |
craniocervical region | 4.28e-08 | 62 |
organ component layer | 1.18e-07 | 66 |
respiratory system | 6.51e-07 | 74 |
basal ganglion | 8.85e-07 | 9 |
neural nucleus | 8.85e-07 | 9 |
nuclear complex of neuraxis | 8.85e-07 | 9 |
nucleus of brain | 8.85e-07 | 9 |
aggregate regional part of brain | 8.85e-07 | 9 |
collection of basal ganglia | 8.85e-07 | 9 |
cerebral subcortex | 8.85e-07 | 9 |