FFCP PHASE1:Hg19::chr17:1972190..1972210,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:1972190..1972210,- | |||
|description=CAGE_peak_at_chr17:1972190..1972210,- | |description=CAGE_peak_at_chr17:1972190..1972210,- | ||
|id=chr17:1972190..1972210,- | |id=chr17:1972190..1972210,- | ||
|ontology_enrichment_celltype=CL:0002139!6.47e-14!24;CL:0000222!2.62e-11!119;CL:0000115!2.60e-10!35;CL:0000071!3.85e-10!18;CL:0002546!3.85e-10!18;CL:0000055!1.37e-08!180;CL:0002334!2.23e-08!12;CL:0000187!8.90e-08!54;CL:0000220!1.31e-07!246;CL:0000183!1.79e-07!59;CL:0002321!2.03e-07!248;CL:0002078!4.52e-07!44;CL:0000680!4.88e-07!57;CL:0000056!4.88e-07!57;CL:0000355!4.88e-07!57;CL:0000192!5.03e-07!42;CL:0000514!5.03e-07!42;CL:1000413!9.00e-07!9 | |ontology_enrichment_celltype=CL:0002139!6.47e-14!24;CL:0000222!2.62e-11!119;CL:0000115!2.60e-10!35;CL:0000071!3.85e-10!18;CL:0002546!3.85e-10!18;CL:0000055!1.37e-08!180;CL:0002334!2.23e-08!12;CL:0000187!8.90e-08!54;CL:0000220!1.31e-07!246;CL:0000183!1.79e-07!59;CL:0002321!2.03e-07!248;CL:0002078!4.52e-07!44;CL:0000680!4.88e-07!57;CL:0000056!4.88e-07!57;CL:0000355!4.88e-07!57;CL:0000192!5.03e-07!42;CL:0000514!5.03e-07!42;CL:1000413!9.00e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002583;9.21e-17;2!CL:0002582;2.09e-11;3!CL:0002592;3.78e-11;3!CL:0002334;1.12e-10;12!CL:0002601;5.51e-09;1!CL:0002595;4.99e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002583,7.90e-17,2;CL:0002582,1.66e-11,3;CL:0002592,3.25e-11,3;CL:0002334,9.49e-11,12;CL:0002601,2.82e-09,1;CL:0002595,7.63e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3347;1.88e-09;1!DOID:0060085;5.51e-09;1!DOID:3165;5.51e-09;1!DOID:0060121;5.51e-09;1!DOID:2438;5.51e-09;1!DOID:4418;5.51e-09;1!DOID:2394;6.28e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.89e-09,1;DOID:2394,6.57e-09,14;DOID:0060085,7.85e-09,1;DOID:3165,7.85e-09,1;DOID:0060121,7.85e-09,1;DOID:2438,7.85e-09,1;DOID:4418,7.85e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002049!7.52e-16!79;UBERON:0007798!7.52e-16!79;UBERON:0000055!1.57e-14!69;UBERON:0001981!2.75e-11!60;UBERON:0007500!2.75e-11!60;UBERON:0004537!2.75e-11!60;UBERON:0006965!2.75e-11!60;UBERON:0000487!6.49e-11!22;UBERON:0001637!2.16e-10!42;UBERON:0003509!2.16e-10!42;UBERON:0004572!2.16e-10!42;UBERON:0004535!2.34e-10!110;UBERON:0001986!3.85e-10!18;UBERON:0004638!3.85e-10!18;UBERON:0004852!3.85e-10!18;UBERON:0001009!8.98e-10!113;UBERON:0000490!2.32e-09!138;UBERON:0006914!4.42e-09!25;UBERON:0004872!4.67e-09!84;UBERON:0003914!5.18e-08!118;UBERON:0004573!3.05e-07!33;UBERON:0004571!3.05e-07!33;UBERON:0004290!3.17e-07!70;UBERON:0003915!9.00e-07!9;UBERON:0004700!9.00e-07!9;UBERON:0001917!9.00e-07!9 | |ontology_enrichment_uberon=UBERON:0002049!7.52e-16!79;UBERON:0007798!7.52e-16!79;UBERON:0000055!1.57e-14!69;UBERON:0001981!2.75e-11!60;UBERON:0007500!2.75e-11!60;UBERON:0004537!2.75e-11!60;UBERON:0006965!2.75e-11!60;UBERON:0000487!6.49e-11!22;UBERON:0001637!2.16e-10!42;UBERON:0003509!2.16e-10!42;UBERON:0004572!2.16e-10!42;UBERON:0004535!2.34e-10!110;UBERON:0001986!3.85e-10!18;UBERON:0004638!3.85e-10!18;UBERON:0004852!3.85e-10!18;UBERON:0001009!8.98e-10!113;UBERON:0000490!2.32e-09!138;UBERON:0006914!4.42e-09!25;UBERON:0004872!4.67e-09!84;UBERON:0003914!5.18e-08!118;UBERON:0004573!3.05e-07!33;UBERON:0004571!3.05e-07!33;UBERON:0004290!3.17e-07!70;UBERON:0003915!9.00e-07!9;UBERON:0004700!9.00e-07!9;UBERON:0001917!9.00e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002119;9.05e-18;4!UBERON:0003498;3.78e-11;3!UBERON:0005985;3.78e-11;3!UBERON:0001621;3.78e-11;3!UBERON:0000992;1.33e-09;13!UBERON:0002072;3.15e-07;5!UBERON:0003834;4.99e-07;5!UBERON:0001533;4.99e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002119,8.83e-18,4;UBERON:0001621,3.25e-11,3;UBERON:0000992,1.39e-09,13;UBERON:0000055,9.35e-08,68;UBERON:0002072,2.97e-07,5;UBERON:0003498,4.56e-07,5;UBERON:0005985,4.56e-07,5;UBERON:0003834,7.63e-07,5;UBERON:0001533,7.63e-07,5 | |||
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|short_description=p@chr17:1972190..1972210,- | |short_description=p@chr17:1972190..1972210,- | ||
}} | }} |
Latest revision as of 14:35, 25 July 2015
Short description: | p@chr17:1972190..1972210, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:1972190..1972210, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous preadipocyte | 7.90e-17 | 2 |
visceral preadipocyte | 1.66e-11 | 3 |
smooth muscle cell of the coronary artery | 3.25e-11 | 3 |
preadipocyte | 9.49e-11 | 12 |
uterine smooth muscle cell | 2.82e-09 | 1 |
smooth muscle cell of the subclavian artery | 7.63e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
left ovary | 8.83e-18 | 4 |
coronary artery | 3.25e-11 | 3 |
female gonad | 1.39e-09 | 13 |
vessel | 9.35e-08 | 68 |
hypodermis | 2.97e-07 | 5 |
heart blood vessel | 4.56e-07 | 5 |
coronary vessel | 4.56e-07 | 5 |
thoracic segment blood vessel | 7.63e-07 | 5 |
subclavian artery | 7.63e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.89e-09 | 1 |
ovarian cancer | 6.57e-09 | 14 |
organ system benign neoplasm | 7.85e-09 | 1 |
skin benign neoplasm | 7.85e-09 | 1 |
integumentary system benign neoplasm | 7.85e-09 | 1 |
dermis tumor | 7.85e-09 | 1 |
cutaneous fibrous histiocytoma | 7.85e-09 | 1 |