FFCP PHASE1:Hg19::chrX:43832586..43832607,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4693 | |EntrezGene=4693 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7678 | |HGNC=7678 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_ENST00000470584_5end | |association_with_transcript=24bp_to_ENST00000470584_5end | ||
|cluster_id=chrX:43832586..43832607,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_NDP_5end | |description=CAGE_peak_2_at_NDP_5end | ||
|id=chrX:43832586..43832607,- | |id=chrX:43832586..43832607,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002605;3.00e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.33e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.26e-17;82!UBERON:0006241;5.00e-10;3!UBERON:0003057;5.00e-10;3!UBERON:0010122;6.27e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.59e-58!57;UBERON:0005068!6.59e-58!57;UBERON:0006241!6.59e-58!57;UBERON:0007135!6.59e-58!57;UBERON:0001017!4.23e-54!82;UBERON:0005743!1.02e-52!86;UBERON:0003075!2.57e-48!86;UBERON:0007284!2.57e-48!86;UBERON:0002780!2.89e-48!41;UBERON:0001890!2.89e-48!41;UBERON:0006240!2.89e-48!41;UBERON:0000073!1.34e-47!94;UBERON:0001016!1.34e-47!94;UBERON:0002616!1.41e-47!59;UBERON:0003080!8.02e-47!42;UBERON:0002346!2.53e-45!90;UBERON:0002020!6.68e-45!34;UBERON:0003528!6.68e-45!34;UBERON:0001893!1.49e-44!34;UBERON:0000955!4.59e-44!69;UBERON:0006238!4.59e-44!69;UBERON:0002791!3.92e-43!33;UBERON:0007023!1.30e-42!115;UBERON:0001869!1.57e-41!32;UBERON:0003056!2.52e-37!61;UBERON:0000033!1.38e-32!123;UBERON:0000956!1.15e-30!25;UBERON:0000203!1.15e-30!25;UBERON:0000153!3.48e-30!129;UBERON:0007811!3.48e-30!129;UBERON:0004121!1.27e-28!169;UBERON:0000924!1.80e-27!173;UBERON:0006601!1.80e-27!173;UBERON:0002619!1.09e-26!22;UBERON:0001950!1.60e-23!20;UBERON:0002420!8.86e-16!9;UBERON:0007245!8.86e-16!9;UBERON:0010009!8.86e-16!9;UBERON:0010011!8.86e-16!9;UBERON:0000454!8.86e-16!9;UBERON:0002308!9.95e-16!9;UBERON:0000125!9.95e-16!9;UBERON:0009663!1.55e-12!7;UBERON:0003076!4.64e-12!15;UBERON:0003057!4.64e-12!15;UBERON:0000025!2.02e-11!194;UBERON:0000475!7.86e-11!365;UBERON:0000200!1.12e-10!6;UBERON:0002298!2.27e-10!8;UBERON:0000062!2.55e-10!511;UBERON:0004111!5.37e-10!241;UBERON:0000477!6.53e-10!286;UBERON:0000922!6.60e-10!612;UBERON:0000349!1.43e-09!5;UBERON:0000064!1.59e-09!219;UBERON:0002050!2.24e-09!605;UBERON:0005423!2.24e-09!605;UBERON:0000483!3.07e-09!309;UBERON:0000467!4.16e-09!625;UBERON:0000480!4.83e-09!626;UBERON:0000119!5.68e-09!312;UBERON:0000923!6.28e-09!604;UBERON:0005291!6.28e-09!604;UBERON:0006598!6.28e-09!604;UBERON:0002532!6.28e-09!604;UBERON:0002021!8.76e-09!5;UBERON:0000468!2.29e-08!659;UBERON:0004733!3.40e-08!12;UBERON:0002028!3.40e-08!12;UBERON:0007277!3.40e-08!12;UBERON:0001871!4.40e-08!7;UBERON:0000369!5.63e-08!4;UBERON:0002435!5.63e-08!4;UBERON:0000204!5.63e-08!4;UBERON:0010082!5.63e-08!4;UBERON:0000481!8.26e-08!347;UBERON:0004732!2.02e-07!13 | |ontology_enrichment_uberon=UBERON:0001049!6.59e-58!57;UBERON:0005068!6.59e-58!57;UBERON:0006241!6.59e-58!57;UBERON:0007135!6.59e-58!57;UBERON:0001017!4.23e-54!82;UBERON:0005743!1.02e-52!86;UBERON:0003075!2.57e-48!86;UBERON:0007284!2.57e-48!86;UBERON:0002780!2.89e-48!41;UBERON:0001890!2.89e-48!41;UBERON:0006240!2.89e-48!41;UBERON:0000073!1.34e-47!94;UBERON:0001016!1.34e-47!94;UBERON:0002616!1.41e-47!59;UBERON:0003080!8.02e-47!42;UBERON:0002346!2.53e-45!90;UBERON:0002020!6.68e-45!34;UBERON:0003528!6.68e-45!34;UBERON:0001893!1.49e-44!34;UBERON:0000955!4.59e-44!69;UBERON:0006238!4.59e-44!69;UBERON:0002791!3.92e-43!33;UBERON:0007023!1.30e-42!115;UBERON:0001869!1.57e-41!32;UBERON:0003056!2.52e-37!61;UBERON:0000033!1.38e-32!123;UBERON:0000956!1.15e-30!25;UBERON:0000203!1.15e-30!25;UBERON:0000153!3.48e-30!129;UBERON:0007811!3.48e-30!129;UBERON:0004121!1.27e-28!169;UBERON:0000924!1.80e-27!173;UBERON:0006601!1.80e-27!173;UBERON:0002619!1.09e-26!22;UBERON:0001950!1.60e-23!20;UBERON:0002420!8.86e-16!9;UBERON:0007245!8.86e-16!9;UBERON:0010009!8.86e-16!9;UBERON:0010011!8.86e-16!9;UBERON:0000454!8.86e-16!9;UBERON:0002308!9.95e-16!9;UBERON:0000125!9.95e-16!9;UBERON:0009663!1.55e-12!7;UBERON:0003076!4.64e-12!15;UBERON:0003057!4.64e-12!15;UBERON:0000025!2.02e-11!194;UBERON:0000475!7.86e-11!365;UBERON:0000200!1.12e-10!6;UBERON:0002298!2.27e-10!8;UBERON:0000062!2.55e-10!511;UBERON:0004111!5.37e-10!241;UBERON:0000477!6.53e-10!286;UBERON:0000922!6.60e-10!612;UBERON:0000349!1.43e-09!5;UBERON:0000064!1.59e-09!219;UBERON:0002050!2.24e-09!605;UBERON:0005423!2.24e-09!605;UBERON:0000483!3.07e-09!309;UBERON:0000467!4.16e-09!625;UBERON:0000480!4.83e-09!626;UBERON:0000119!5.68e-09!312;UBERON:0000923!6.28e-09!604;UBERON:0005291!6.28e-09!604;UBERON:0006598!6.28e-09!604;UBERON:0002532!6.28e-09!604;UBERON:0002021!8.76e-09!5;UBERON:0000468!2.29e-08!659;UBERON:0004733!3.40e-08!12;UBERON:0002028!3.40e-08!12;UBERON:0007277!3.40e-08!12;UBERON:0001871!4.40e-08!7;UBERON:0000369!5.63e-08!4;UBERON:0002435!5.63e-08!4;UBERON:0000204!5.63e-08!4;UBERON:0010082!5.63e-08!4;UBERON:0000481!8.26e-08!347;UBERON:0004732!2.02e-07!13 | ||
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|short_description=p2@NDP | |short_description=p2@NDP | ||
}} | }} |
Latest revision as of 02:56, 25 September 2015
Short description: | p2@NDP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NDP_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 24bp_to_ENST00000470584_5end |
EntrezGene: | NDP |
HGNC: | 7678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.33e-09 | 3 |