FFCP PHASE1:Hg19::chr3:126236605..126236621,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=131669 | |EntrezGene=131669 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26444 | |HGNC=26444 | ||
|TSSclassifier=strong | |||
|UniProt=Q96N76,E9PE13,Q68CJ7 | |UniProt=Q96N76,E9PE13,Q68CJ7 | ||
|association_with_transcript=0bp_to_ENST00000290868,NM_001165974,NM_144639_5end | |association_with_transcript=0bp_to_ENST00000290868,NM_001165974,NM_144639_5end | ||
|cluster_id=chr3:126236605..126236621,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_UROC1_5end | |description=CAGE_peak_2_at_UROC1_5end | ||
|id=chr3:126236605..126236621,- | |id=chr3:126236605..126236621,- | ||
|ontology_enrichment_celltype=CL:0000181!3.92e-50!12;CL:0000417!3.92e-50!12;CL:0000668!3.92e-50!12;CL:0000414!3.92e-50!12;CL:0000412!3.92e-50!12;CL:0000182!3.92e-50!12;CL:0000223!1.11e-12!59 | |ontology_enrichment_celltype=CL:0000181!3.92e-50!12;CL:0000417!3.92e-50!12;CL:0000668!3.92e-50!12;CL:0000414!3.92e-50!12;CL:0000412!3.92e-50!12;CL:0000182!3.92e-50!12;CL:0000223!1.11e-12!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.38e-29;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.33e-29,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.17e-18;11!UBERON:0009497;6.65e-16;13!UBERON:0001041;2.97e-07;30!UBERON:0003104;2.97e-07;31 | |||
|ontology_enrichment_disease=DOID:178!1.42e-13!1;DOID:326!1.42e-13!1;DOID:3978!1.42e-13!1;DOID:3394!1.42e-13!1;DOID:5844!1.42e-13!1;DOID:7!7.18e-08!39;DOID:114!1.99e-07!2 | |ontology_enrichment_disease=DOID:178!1.42e-13!1;DOID:326!1.42e-13!1;DOID:3978!1.42e-13!1;DOID:3394!1.42e-13!1;DOID:5844!1.42e-13!1;DOID:7!7.18e-08!39;DOID:114!1.99e-07!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.35e-52!19;UBERON:0006925!4.35e-52!19;UBERON:0008836!4.35e-52!19;UBERON:0005057!1.43e-46!26;UBERON:0008835!7.02e-45!22;UBERON:0003894!7.02e-45!22;UBERON:0009854!6.79e-43!23;UBERON:0007499!2.12e-39!25;UBERON:0009497!2.12e-39!25;UBERON:0000015!2.12e-39!25;UBERON:0002423!2.12e-39!25;UBERON:0006235!2.12e-39!25;UBERON:0004161!2.12e-39!25;UBERON:0009856!7.48e-38!26;UBERON:0002365!1.30e-31!31;UBERON:0002330!1.30e-31!31;UBERON:0002368!6.69e-28!35;UBERON:0003929!7.12e-22!54;UBERON:0000949!1.68e-21!45;UBERON:0005172!1.82e-21!55;UBERON:0005173!1.82e-21!55;UBERON:0002417!3.04e-19!61;UBERON:0000916!3.04e-19!61;UBERON:0002530!3.58e-16!59;UBERON:0005911!5.19e-14!82;UBERON:0001041!1.56e-11!98;UBERON:0005177!1.85e-10!107;UBERON:0004921!3.28e-10!129;UBERON:0004185!3.28e-10!129;UBERON:0009569!7.75e-10!113;UBERON:0002405!1.50e-09!115;UBERON:0000466!1.08e-08!126;UBERON:0000077!2.19e-08!130;UBERON:0001007!2.86e-08!155;UBERON:0001555!2.86e-08!155;UBERON:0007026!2.86e-08!155;UBERON:0000490!8.02e-08!138;UBERON:0003914!1.45e-07!118;UBERON:0004119!1.81e-07!169;UBERON:0000925!1.81e-07!169;UBERON:0006595!1.81e-07!169 | |ontology_enrichment_uberon=UBERON:0002107!4.35e-52!19;UBERON:0006925!4.35e-52!19;UBERON:0008836!4.35e-52!19;UBERON:0005057!1.43e-46!26;UBERON:0008835!7.02e-45!22;UBERON:0003894!7.02e-45!22;UBERON:0009854!6.79e-43!23;UBERON:0007499!2.12e-39!25;UBERON:0009497!2.12e-39!25;UBERON:0000015!2.12e-39!25;UBERON:0002423!2.12e-39!25;UBERON:0006235!2.12e-39!25;UBERON:0004161!2.12e-39!25;UBERON:0009856!7.48e-38!26;UBERON:0002365!1.30e-31!31;UBERON:0002330!1.30e-31!31;UBERON:0002368!6.69e-28!35;UBERON:0003929!7.12e-22!54;UBERON:0000949!1.68e-21!45;UBERON:0005172!1.82e-21!55;UBERON:0005173!1.82e-21!55;UBERON:0002417!3.04e-19!61;UBERON:0000916!3.04e-19!61;UBERON:0002530!3.58e-16!59;UBERON:0005911!5.19e-14!82;UBERON:0001041!1.56e-11!98;UBERON:0005177!1.85e-10!107;UBERON:0004921!3.28e-10!129;UBERON:0004185!3.28e-10!129;UBERON:0009569!7.75e-10!113;UBERON:0002405!1.50e-09!115;UBERON:0000466!1.08e-08!126;UBERON:0000077!2.19e-08!130;UBERON:0001007!2.86e-08!155;UBERON:0001555!2.86e-08!155;UBERON:0007026!2.86e-08!155;UBERON:0000490!8.02e-08!138;UBERON:0003914!1.45e-07!118;UBERON:0004119!1.81e-07!169;UBERON:0000925!1.81e-07!169;UBERON:0006595!1.81e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.86e-41;19!UBERON:0006925;1.86e-41;19!UBERON:0002423;1.44e-31;25!UBERON:0002365;1.48e-25;31!UBERON:0002330;1.48e-25;31!UBERON:0002368;4.38e-22;33!UBERON:0000949;2.02e-15;43!UBERON:0005172;2.89e-11;52!UBERON:0005173;2.89e-11;52!UBERON:0002417;2.11e-09;58!UBERON:0000916;2.11e-09;58!UBERON:0002530;1.07e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.80e-41,19;UBERON:0006925,1.80e-41,19;UBERON:0008836,1.80e-41,19;UBERON:0008835,7.47e-36,22;UBERON:0003894,7.47e-36,22;UBERON:0009854,2.64e-34,23;UBERON:0007499,1.40e-31,25;UBERON:0009497,1.40e-31,25;UBERON:0000015,1.40e-31,25;UBERON:0002423,1.40e-31,25;UBERON:0006235,1.40e-31,25;UBERON:0004161,1.40e-31,25;UBERON:0009856,2.25e-30,26;UBERON:0002365,1.66e-25,31;UBERON:0002330,1.66e-25,31;UBERON:0002368,1.30e-22,35;UBERON:0000949,1.30e-17,45;UBERON:0003929,1.09e-14,54;UBERON:0005172,1.09e-14,54;UBERON:0005173,1.09e-14,54;UBERON:0002530,1.89e-13,59;UBERON:0002417,3.17e-13,60;UBERON:0000916,3.17e-13,60;UBERON:0005911,1.13e-09,82;UBERON:0001041,4.08e-09,87;UBERON:0005177,7.67e-08,101;UBERON:0009569,4.63e-07,112;UBERON:0003914,9.38e-07,117 | |||
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|short_description=p2@UROC1 | |short_description=p2@UROC1 | ||
}} | }} |
Latest revision as of 04:22, 20 September 2015
Short description: | p2@UROC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UROC1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000290868, NM_001165974, NM_144639_5end |
EntrezGene: | UROC1 |
HGNC: | 26444 |
UniProt: | Q96N76E9PE13Q68CJ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.33e-29 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.80e-41 | 19 |
digestive gland | 1.80e-41 | 19 |
liver bud | 1.80e-41 | 19 |
hepatic diverticulum | 7.47e-36 | 22 |
liver primordium | 7.47e-36 | 22 |
digestive tract diverticulum | 2.64e-34 | 23 |
epithelial sac | 1.40e-31 | 25 |
epithelium of foregut-midgut junction | 1.40e-31 | 25 |
anatomical boundary | 1.40e-31 | 25 |
hepatobiliary system | 1.40e-31 | 25 |
foregut-midgut junction | 1.40e-31 | 25 |
septum transversum | 1.40e-31 | 25 |
sac | 2.25e-30 | 26 |
exocrine gland | 1.66e-25 | 31 |
exocrine system | 1.66e-25 | 31 |
endocrine gland | 1.30e-22 | 35 |
endocrine system | 1.30e-17 | 45 |
gut epithelium | 1.09e-14 | 54 |
abdomen element | 1.09e-14 | 54 |
abdominal segment element | 1.09e-14 | 54 |
gland | 1.89e-13 | 59 |
abdominal segment of trunk | 3.17e-13 | 60 |
abdomen | 3.17e-13 | 60 |
endo-epithelium | 1.13e-09 | 82 |
foregut | 4.08e-09 | 87 |
trunk region element | 7.67e-08 | 101 |
subdivision of trunk | 4.63e-07 | 112 |
epithelial tube | 9.38e-07 | 117 |