FFCP PHASE1:Hg19::chr10:5334568..5334596,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:5334568..5334596,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_at_chr10:5334568..5334596,+ | |description=CAGE_peak_at_chr10:5334568..5334596,+ | ||
|id=chr10:5334568..5334596,+ | |id=chr10:5334568..5334596,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.78e-32!172;CL:0000566!1.78e-32!172;CL:0002087!9.77e-30!119;CL:0000988!2.82e-29!182;CL:0002032!7.17e-29!165;CL:0000837!7.17e-29!165;CL:0000738!1.62e-28!140;CL:0002031!5.93e-23!124;CL:0000791!2.43e-21!18;CL:0000789!2.43e-21!18;CL:0002420!2.43e-21!18;CL:0002419!2.43e-21!18;CL:0000790!2.43e-21!18;CL:0000084!3.36e-19!25;CL:0000827!3.36e-19!25;CL:0002057!2.50e-18!42;CL:0000763!3.26e-17!112;CL:0000049!3.26e-17!112;CL:0000860!1.69e-16!45;CL:0002194!6.20e-16!63;CL:0000576!6.20e-16!63;CL:0000040!6.20e-16!63;CL:0000559!6.20e-16!63;CL:0002009!4.00e-15!65;CL:0000766!2.29e-14!76;CL:0000839!2.58e-13!70;CL:0000557!5.51e-13!71;CL:0000625!3.19e-12!11;CL:0000542!4.18e-11!53;CL:0000051!4.18e-11!53;CL:0000838!1.47e-10!52;CL:0000624!1.05e-09!6 | |ontology_enrichment_celltype=CL:0000037!1.78e-32!172;CL:0000566!1.78e-32!172;CL:0002087!9.77e-30!119;CL:0000988!2.82e-29!182;CL:0002032!7.17e-29!165;CL:0000837!7.17e-29!165;CL:0000738!1.62e-28!140;CL:0002031!5.93e-23!124;CL:0000791!2.43e-21!18;CL:0000789!2.43e-21!18;CL:0002420!2.43e-21!18;CL:0002419!2.43e-21!18;CL:0000790!2.43e-21!18;CL:0000084!3.36e-19!25;CL:0000827!3.36e-19!25;CL:0002057!2.50e-18!42;CL:0000763!3.26e-17!112;CL:0000049!3.26e-17!112;CL:0000860!1.69e-16!45;CL:0002194!6.20e-16!63;CL:0000576!6.20e-16!63;CL:0000040!6.20e-16!63;CL:0000559!6.20e-16!63;CL:0002009!4.00e-15!65;CL:0000766!2.29e-14!76;CL:0000839!2.58e-13!70;CL:0000557!5.51e-13!71;CL:0000625!3.19e-12!11;CL:0000542!4.18e-11!53;CL:0000051!4.18e-11!53;CL:0000838!1.47e-10!52;CL:0000624!1.05e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.85e-37;18!CL:0000789;2.85e-37;18!CL:0002419;2.85e-37;18!CL:0000084;2.52e-29;25!CL:0000624;1.73e-19;6!CL:0000625;8.72e-18;11!CL:0000226;1.95e-10;3!CL:0000842;1.95e-10;3!CL:0000898;3.69e-10;3!CL:0000623;6.61e-10;3!CL:0002087;7.38e-10;104!CL:0000542;3.17e-09;53!CL:0000815;1.66e-07;2!CL:0000792;1.66e-07;2!CL:0002677;1.66e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.75e-38,18;CL:0000789,9.75e-38,18;CL:0002420,9.75e-38,18;CL:0002419,9.75e-38,18;CL:0000790,9.75e-38,18;CL:0000084,1.48e-29,25;CL:0000827,1.48e-29,25;CL:0002087,1.52e-22,115;CL:0000624,9.45e-20,6;CL:0000738,4.24e-19,136;CL:0000625,4.80e-18,11;CL:0000838,1.30e-17,52;CL:0000542,3.46e-17,53;CL:0000051,3.46e-17,53;CL:0002031,8.62e-17,120;CL:0000037,7.57e-14,168;CL:0000988,1.02e-12,177;CL:0002032,1.43e-11,161;CL:0000837,1.43e-11,161;CL:0000226,1.26e-10,3;CL:0000842,1.26e-10,3;CL:0000898,1.75e-10,3;CL:0000623,5.50e-10,3;CL:0000825,5.50e-10,3;CL:0000815,1.16e-07,2;CL:0000792,1.16e-07,2;CL:0002677,1.16e-07,2;CL:0000893,4.49e-07,2;CL:0002489,4.49e-07,2;CL:0000809,4.49e-07,2;CL:0000808,4.49e-07,2;CL:0000894,4.49e-07,2;CL:0000806,4.49e-07,2;CL:0000807,4.49e-07,2;CL:0000805,4.49e-07,2;CL:0002425,4.49e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;2.85e-37;18!CL:0000051;3.17e-09;53!CL:0002425;5.75e-07;2 | |||
|ontology_enrichment_disease=DOID:1240!2.34e-08!39;DOID:2531!1.40e-07!51;DOID:0060083!1.40e-07!51 | |ontology_enrichment_disease=DOID:1240!2.34e-08!39;DOID:2531!1.40e-07!51;DOID:0060083!1.40e-07!51 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.57e-21!102;UBERON:0003061!3.57e-21!102;UBERON:0002193!5.58e-20!112;UBERON:0002371!2.00e-10!80;UBERON:0002405!2.62e-10!115;UBERON:0000178!2.85e-10!15;UBERON:0000179!2.85e-10!15;UBERON:0000463!2.85e-10!15;UBERON:0001474!4.78e-09!86 | |ontology_enrichment_uberon=UBERON:0002390!3.57e-21!102;UBERON:0003061!3.57e-21!102;UBERON:0002193!5.58e-20!112;UBERON:0002371!2.00e-10!80;UBERON:0002405!2.62e-10!115;UBERON:0000178!2.85e-10!15;UBERON:0000179!2.85e-10!15;UBERON:0000463!2.85e-10!15;UBERON:0001474!4.78e-09!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.58e-16;15!UBERON:0000179;8.58e-16;15!UBERON:0000463;8.58e-16;15!UBERON:0002390;7.76e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.93e-16,15;UBERON:0000179,5.93e-16,15;UBERON:0000463,5.93e-16,15;UBERON:0002193,3.87e-11,108;UBERON:0002390,1.48e-10,98;UBERON:0003061,1.48e-10,98 | |||
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|short_description=p@chr10:5334568..5334596,+ | |short_description=p@chr10:5334568..5334596,+ | ||
}} | }} |
Latest revision as of 14:08, 23 July 2015
Short description: | p@chr10:5334568..5334596, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:5334568..5334596, + |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 5.93e-16 | 15 |
haemolymphatic fluid | 5.93e-16 | 15 |
organism substance | 5.93e-16 | 15 |
hemolymphoid system | 3.87e-11 | 108 |
hematopoietic system | 1.48e-10 | 98 |
blood island | 1.48e-10 | 98 |