FFCP PHASE1:Hg19::chr11:12397960..12397988,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:12397960..12397988,+ | |||
|coexpression_cluster_id=C27 | |||
|description=CAGE_peak_at_chr11:12397960..12397988,+ | |description=CAGE_peak_at_chr11:12397960..12397988,+ | ||
|id=chr11:12397960..12397988,+ | |id=chr11:12397960..12397988,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.78e-33!180;CL:0000057!5.71e-17!75;CL:0000680!1.07e-16!57;CL:0000056!1.07e-16!57;CL:0000355!1.07e-16!57;CL:0000187!3.25e-15!54;CL:0000183!1.65e-13!59;CL:0000393!8.63e-13!60;CL:0000211!8.63e-13!60;CL:0000192!3.37e-10!42;CL:0000514!3.37e-10!42;CL:0002620!1.47e-09!23;CL:0000048!2.29e-09!430;CL:0000723!1.22e-08!436;CL:0002334!2.61e-08!12;CL:0000034!9.97e-08!444;CL:0000359!1.62e-07!32 | |ontology_enrichment_celltype=CL:0000055!2.78e-33!180;CL:0000057!5.71e-17!75;CL:0000680!1.07e-16!57;CL:0000056!1.07e-16!57;CL:0000355!1.07e-16!57;CL:0000187!3.25e-15!54;CL:0000183!1.65e-13!59;CL:0000393!8.63e-13!60;CL:0000211!8.63e-13!60;CL:0000192!3.37e-10!42;CL:0000514!3.37e-10!42;CL:0002620!1.47e-09!23;CL:0000048!2.29e-09!430;CL:0000723!1.22e-08!436;CL:0002334!2.61e-08!12;CL:0000034!9.97e-08!444;CL:0000359!1.62e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0002334;2.39e-13;12!CL:0002494;7.39e-09;16!CL:0000569;3.68e-08;4!CL:0002570;5.11e-08;8!CL:0000136;3.14e-07;13!CL:0002620;5.12e-07;23!CL:0000723;9.90e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.47e-13,12;CL:0000057,3.09e-11,76;CL:0000048,6.60e-10,427;CL:0000723,1.78e-09,433;CL:0000136,1.83e-09,15;CL:0002494,4.46e-09,16;CL:0000034,6.36e-09,441;CL:0000569,1.53e-08,4;CL:0000011,1.53e-08,4;CL:0002570,4.23e-08,8;CL:0002620,3.32e-07,23;CL:0002582,6.92e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000011;3.68e-08;4 | |||
|ontology_enrichment_disease=DOID:2394!9.72e-10!14 | |ontology_enrichment_disease=DOID:2394!9.72e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;8.45e-16;14!DOID:120;9.15e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.51e-16,14;DOID:120,6.89e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0002385!1.00e-16!63;UBERON:0001015!1.00e-16!63;UBERON:0000383!1.00e-16!63;UBERON:0004290!1.01e-16!70;UBERON:0001134!4.78e-16!61;UBERON:0002036!4.78e-16!61;UBERON:0003082!4.78e-16!61;UBERON:0000914!2.71e-15!83;UBERON:0002329!2.71e-15!83;UBERON:0003077!2.71e-15!83;UBERON:0003059!2.71e-15!83;UBERON:0007282!2.71e-15!83;UBERON:0009618!2.71e-15!83;UBERON:0007285!2.71e-15!83;UBERON:0000486!7.07e-14!82;UBERON:0005256!1.69e-09!143;UBERON:0002199!2.85e-08!45;UBERON:0002416!2.85e-08!45;UBERON:0000475!8.01e-08!365;UBERON:0002100!1.26e-07!216;UBERON:0004872!2.84e-07!84;UBERON:0000948!6.53e-07!24;UBERON:0005498!6.53e-07!24;UBERON:0004140!6.53e-07!24;UBERON:0009881!6.53e-07!24;UBERON:0004141!6.53e-07!24;UBERON:0003084!6.53e-07!24;UBERON:0007005!6.53e-07!24;UBERON:0004139!6.53e-07!24;UBERON:0004291!6.53e-07!24 | |ontology_enrichment_uberon=UBERON:0002385!1.00e-16!63;UBERON:0001015!1.00e-16!63;UBERON:0000383!1.00e-16!63;UBERON:0004290!1.01e-16!70;UBERON:0001134!4.78e-16!61;UBERON:0002036!4.78e-16!61;UBERON:0003082!4.78e-16!61;UBERON:0000914!2.71e-15!83;UBERON:0002329!2.71e-15!83;UBERON:0003077!2.71e-15!83;UBERON:0003059!2.71e-15!83;UBERON:0007282!2.71e-15!83;UBERON:0009618!2.71e-15!83;UBERON:0007285!2.71e-15!83;UBERON:0000486!7.07e-14!82;UBERON:0005256!1.69e-09!143;UBERON:0002199!2.85e-08!45;UBERON:0002416!2.85e-08!45;UBERON:0000475!8.01e-08!365;UBERON:0002100!1.26e-07!216;UBERON:0004872!2.84e-07!84;UBERON:0000948!6.53e-07!24;UBERON:0005498!6.53e-07!24;UBERON:0004140!6.53e-07!24;UBERON:0009881!6.53e-07!24;UBERON:0004141!6.53e-07!24;UBERON:0003084!6.53e-07!24;UBERON:0007005!6.53e-07!24;UBERON:0004139!6.53e-07!24;UBERON:0004291!6.53e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.07e-10;6!UBERON:0002358;5.07e-10;6!UBERON:0003684;5.07e-10;6!UBERON:0001178;5.07e-10;6!UBERON:0001013;4.13e-09;14!UBERON:0000948;1.11e-08;22!UBERON:0004457;1.73e-08;9!UBERON:0000042;1.73e-08;9!UBERON:0002119;3.68e-08;4!UBERON:0000992;1.19e-07;13!UBERON:0007100;2.65e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.13e-10,6;UBERON:0002358,6.13e-10,6;UBERON:0003684,6.13e-10,6;UBERON:0001178,6.13e-10,6;UBERON:0001013,3.89e-09,14;UBERON:0002119,2.56e-08,4;UBERON:0004458,4.79e-08,49;UBERON:0000992,6.48e-08,13;UBERON:0002199,7.18e-08,46;UBERON:0002416,7.18e-08,46;UBERON:0000948,7.41e-08,24;UBERON:0005498,7.41e-08,24;UBERON:0004140,7.41e-08,24;UBERON:0009881,7.41e-08,24;UBERON:0004141,7.41e-08,24;UBERON:0003084,7.41e-08,24;UBERON:0007005,7.41e-08,24;UBERON:0004139,7.41e-08,24;UBERON:0004291,7.41e-08,24;UBERON:0002323,8.00e-08,46;UBERON:0005156,4.75e-07,59;UBERON:0000990,4.75e-07,59 | |||
|phase1_expression=0.908391896352783,1.49870366723688,3.24195129420734,1.0007329835313,1.78784437770915,0.872338524100369,0,7.58063848112197,1.30592814099919,0,0,0,0,0.247532705920093,0,1.34465029290355,0,0.730310090387373,0.975865597581014,0.492484232307152,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.15076305659177,0.722878304769133,1.00267582127178,0.289693037921647,1.5905718941022,0.973269740605272,0.378139268656271,0,0.175669571386252,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0.379891534993739,1.98613771219828,0.573673241497627,1.06400514659507,0.560677600142307,1.06748995729705,0.24666754841716,1.8672662123986,0,0.490385709340376,0.605429710579726,0.576175924479999,0,2.18512053781224,1.71141546463335,0.597794722207204,0.117434498643765,0.161872944368132,0,0.408308342509787,0.245668634623536,0.516628905878827,0,0.989067717114227,0,0,0.168336113954066,0.125118519871964,0.831192346452549,0,1.22595118319608,0.751190294532984,0.453728732640084,1.07633781413317,2.13557388818567,2.7551147150743,0.900273288253207,1.95799805553034,0.515281080091258,2.79175284497385,1.68776332241266,0.68205903612839,2.01947019395292,1.47279837827679,0,0.355009592516614,0.906768884048762,0.847802961552438,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,1.39310378409594,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53991577168676,2.29193055334967,0,0,1.54241239054985,1.50171528921959,2.00078502841405,0.336393253036082,0.87192013766656,0.80672114403045,0.258543431515556,0,1.690605505112,0.531876233169741,0,0,0,0.532844358032199,0.142977993658148,0,0,0.65147236858747,0.355391948742546,0,0.602878754119172,0,0.499864955910285,0,0,0,0.958499421966331,1.14861935834114,2.85273810081437,1.15825045334063,0.61642896765115,1.43248770591916,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,0,0,0.315404830067869,0.937131319941706,0.300946099727719,0,0,0.664225598535437,0.737476674166813,1.39013783148933,0.783204629850962,0,0,0,0,0,0,0,1.24053903909388,2.14846762603287,0.561320188866147,2.94720043288112,1.02341449813341,1.60853921143608,0,1.85051632563187,2.48586415438378,3.28508624055237,2.59627214591811,2.90525946149898,0,0,0,2.18147451512753,2.1850940160806,1.18011973463482,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.103041011647722,0.0915694648183434,0,0,0,1.6068392984416,3.0934629853479,0.770243085573222,0.921022048356777,0.964856007391714,1.07420244868274,0.145016693914229,1.10794615640931,3.65031346151623,0,0,0,0,0.929691098594572,0,0,0.616067160352178,4.25844824253617,1.73986598415015,0.37064843820784,0.286249773483982,0.372158369359667,0.632758849437452,1.14378116354295,0.511795582622668,0.42793898803392,2.22742273548156,0.78494864019923,2.33834194858309,0.54907405947211,0.942499218765491,1.41527737101321,1.58510321173008,0,0.48763373908959,0.487426979262569,1.05650146756755,0.9554993798559,2.2624869112594,0,0,0,0.438450885253763,0,0,0.202910376962704,0.6196469961995,0.563391205064483,0.286822704408103,0.196498082026242,0.7133421029625,3.19284957663538,0.633322905892992,1.64647446479951,0.379473173765715,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,1.24415835064723,0,0,0,1.1837208676432,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.694499979733169,0,0,0,0.110579259931225,0,0,0,0,2.77020930613669,0,0,0.179515288819544,0,0.31900115973192,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973033209536731,1.22206028986725,0,0,0,0.269604531922708,0,0,0,0,0,0,1.20990716048664,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0.51595809741485,0,0,0,1.26085721434945,0,0,0,0.993573058514948,0.0633107959558787,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0.104602846312333,0,0.577901179803038,0,0,0,0,0,0.558564802544508,0,2.15361907373044,0.199679000498991,0,0,0.268733889946905,0.720599767084807,0,0.0787831823072236,0.247247575143499,0.13480708770837,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.262272940674991,0,0,0,0,1.32418394073086,0,1.08599920350743,1.72844298240254,0.979762080328227,0,0,0.681552087141687,0.906496732161005,0,0,0,0.26446520348538,0,0,0.427149650270779,0,0,0,0,0,0,0,0,1.22538230705385,1.31149052283922,0,0,0,0,0,0.221858103073705,0.124192805882767,0,0,0.303298235083296,0,0,0,0,2.38807684618998,3.73941295755559,4.43844689202091,0.947015026375446,2.0125432140206,1.77962244319307,2.97492088916001,4.38569678913393,1.86524640699337,3.99208904972012,1.91156120596443,4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| ||
|short_description=p@chr11:12397960..12397988,+ | |short_description=p@chr11:12397960..12397988,+ | ||
}} | }} |
Latest revision as of 19:29, 23 July 2015
Short description: | p@chr11:12397960..12397988, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:12397960..12397988, + |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.47e-13 | 12 |
fibroblast | 3.09e-11 | 76 |
multi fate stem cell | 6.60e-10 | 427 |
somatic stem cell | 1.78e-09 | 433 |
fat cell | 1.83e-09 | 15 |
cardiocyte | 4.46e-09 | 16 |
stem cell | 6.36e-09 | 441 |
cardiac mesenchymal cell | 1.53e-08 | 4 |
migratory trunk neural crest cell | 1.53e-08 | 4 |
mesenchymal stem cell of adipose | 4.23e-08 | 8 |
skin fibroblast | 3.32e-07 | 23 |
visceral preadipocyte | 6.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.13e-10 | 6 |
peritoneum | 6.13e-10 | 6 |
abdominal cavity | 6.13e-10 | 6 |
visceral peritoneum | 6.13e-10 | 6 |
adipose tissue | 3.89e-09 | 14 |
left ovary | 2.56e-08 | 4 |
body cavity or lining | 4.79e-08 | 49 |
female gonad | 6.48e-08 | 13 |
integument | 7.18e-08 | 46 |
integumental system | 7.18e-08 | 46 |
heart | 7.41e-08 | 24 |
primitive heart tube | 7.41e-08 | 24 |
primary heart field | 7.41e-08 | 24 |
anterior lateral plate mesoderm | 7.41e-08 | 24 |
heart tube | 7.41e-08 | 24 |
heart primordium | 7.41e-08 | 24 |
cardiac mesoderm | 7.41e-08 | 24 |
cardiogenic plate | 7.41e-08 | 24 |
heart rudiment | 7.41e-08 | 24 |
body cavity | 8.00e-08 | 46 |
reproductive structure | 4.75e-07 | 59 |
reproductive system | 4.75e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.51e-16 | 14 |
female reproductive organ cancer | 6.89e-07 | 27 |