FFCP PHASE1:Hg19::chr12:57882498..57882504,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64333 | |EntrezGene=64333 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14130 | |HGNC=14130 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_ENST00000550288_5end | |association_with_transcript=4bp_to_ENST00000550288_5end | ||
|cluster_id=chr12:57882498..57882504,- | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_39_at_ARHGAP9_5end | |description=CAGE_peak_39_at_ARHGAP9_5end | ||
|id=chr12:57882498..57882504,- | |id=chr12:57882498..57882504,- | ||
|ontology_enrichment_celltype=CL:0000242!4.00e-16!2;CL:0000784!2.67e-11!3;CL:0000312!5.73e-07!5 | |ontology_enrichment_celltype=CL:0000242!4.00e-16!2;CL:0000784!2.67e-11!3;CL:0000312!5.73e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000784;3.66e-23;3!CL:0000840;2.59e-12;5!CL:0000990;1.16e-08;8!CL:0000451;2.55e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,4.09e-23,3;CL:0000840,2.74e-12,5;CL:0001029,2.74e-12,5;CL:0000990,1.21e-08,8;CL:0000451,2.63e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.32e-07;10 | |||
|ontology_enrichment_disease=DOID:3371!1.65e-08!1;DOID:4549!1.65e-08!1;DOID:5861!1.65e-08!1;DOID:6496!1.65e-08!1 | |ontology_enrichment_disease=DOID:3371!1.65e-08!1;DOID:4549!1.65e-08!1;DOID:5861!1.65e-08!1;DOID:6496!1.65e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:154;5.96e-34;2!DOID:4236;5.96e-34;2!DOID:3093;7.48e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:154,5.04e-34,2;DOID:4236,5.04e-34,2;DOID:3093,7.48e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0001154!6.16e-09!1;UBERON:0001153!6.16e-09!1;UBERON:0002372!2.06e-08!1;UBERON:0001961!2.06e-08!1;UBERON:0001744!2.06e-08!1;UBERON:0001735!2.06e-08!1;UBERON:0002022!2.22e-08!1 | |ontology_enrichment_uberon=UBERON:0001154!6.16e-09!1;UBERON:0001153!6.16e-09!1;UBERON:0002372!2.06e-08!1;UBERON:0001961!2.06e-08!1;UBERON:0001744!2.06e-08!1;UBERON:0001735!2.06e-08!1;UBERON:0002022!2.22e-08!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p39@ARHGAP9 | |short_description=p39@ARHGAP9 | ||
}} | }} |
Latest revision as of 14:48, 19 September 2015
Short description: | p39@ARHGAP9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_39_at_ARHGAP9_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | 4bp_to_ENST00000550288_5end |
EntrezGene: | ARHGAP9 |
HGNC: | 14130 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 4.09e-23 | 3 |
immature conventional dendritic cell | 2.74e-12 | 5 |
common dendritic progenitor | 2.74e-12 | 5 |
conventional dendritic cell | 1.21e-08 | 8 |
dendritic cell | 2.63e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 5.04e-34 | 2 |
carcinosarcoma | 5.04e-34 | 2 |
nervous system cancer | 7.48e-07 | 11 |