FFCP PHASE1:Hg19::chr14:50698310..50698322,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6655 | |EntrezGene=6655 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11188 | |HGNC=11188 | ||
|TSSclassifier=strong | |||
|UniProt=Q07890 | |UniProt=Q07890 | ||
|association_with_transcript=-34bp_to_ENST00000216373_5end | |association_with_transcript=-34bp_to_ENST00000216373_5end | ||
|cluster_id=chr14:50698310..50698322,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_SOS2_5end | |description=CAGE_peak_3_at_SOS2_5end | ||
|id=chr14:50698310..50698322,- | |id=chr14:50698310..50698322,- | ||
|ontology_enrichment_celltype=CL:0000766!5.74e-30!76;CL:0000557!1.99e-24!71;CL:0000839!2.84e-23!70;CL:0002194!6.66e-23!63;CL:0000576!6.66e-23!63;CL:0000040!6.66e-23!63;CL:0000559!6.66e-23!63;CL:0000738!1.33e-22!140;CL:0002009!9.92e-22!65;CL:0002057!1.60e-21!42;CL:0000860!1.65e-20!45;CL:0002087!3.59e-17!119;CL:0002031!5.97e-17!124;CL:0000763!1.43e-13!112;CL:0000049!1.43e-13!112;CL:0000037!3.79e-13!172;CL:0000566!3.79e-13!172;CL:0002032!3.89e-12!165;CL:0000837!3.89e-12!165;CL:0000988!7.57e-11!182 | |ontology_enrichment_celltype=CL:0000766!5.74e-30!76;CL:0000557!1.99e-24!71;CL:0000839!2.84e-23!70;CL:0002194!6.66e-23!63;CL:0000576!6.66e-23!63;CL:0000040!6.66e-23!63;CL:0000559!6.66e-23!63;CL:0000738!1.33e-22!140;CL:0002009!9.92e-22!65;CL:0002057!1.60e-21!42;CL:0000860!1.65e-20!45;CL:0002087!3.59e-17!119;CL:0002031!5.97e-17!124;CL:0000763!1.43e-13!112;CL:0000049!1.43e-13!112;CL:0000037!3.79e-13!172;CL:0000566!3.79e-13!172;CL:0002032!3.89e-12!165;CL:0000837!3.89e-12!165;CL:0000988!7.57e-11!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.00e-17;33!CL:0002057;4.00e-17;33!CL:0000473;2.54e-15;39!CL:0000234;2.54e-15;39!CL:0000576;7.53e-15;48!CL:0000766;4.13e-13;69!CL:0000094;5.69e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.99e-33,72;CL:0000557,2.83e-26,67;CL:0000839,1.25e-25,66;CL:0002194,2.56e-25,59;CL:0000576,2.56e-25,59;CL:0000040,2.56e-25,59;CL:0000559,2.56e-25,59;CL:0000473,1.52e-23,48;CL:0000234,1.52e-23,48;CL:0002009,2.23e-23,61;CL:0000860,7.12e-23,42;CL:0002057,7.12e-23,42;CL:0000738,7.13e-23,136;CL:0002087,1.18e-17,115;CL:0002031,4.52e-17,120;CL:0000763,4.58e-14,108;CL:0000049,4.58e-14,108;CL:0000037,5.13e-13,168;CL:0002032,6.10e-12,161;CL:0000837,6.10e-12,161;CL:0000988,3.06e-11,177;CL:0000094,9.52e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.25e-16;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.71e-22!102;UBERON:0003061!2.71e-22!102;UBERON:0002193!1.79e-20!112;UBERON:0002371!2.53e-20!80;UBERON:0001474!5.46e-19!86;UBERON:0004765!1.26e-17!101;UBERON:0001434!1.26e-17!101;UBERON:0002405!2.25e-14!115;UBERON:0007023!4.12e-14!115 | |ontology_enrichment_uberon=UBERON:0002390!2.71e-22!102;UBERON:0003061!2.71e-22!102;UBERON:0002193!1.79e-20!112;UBERON:0002371!2.53e-20!80;UBERON:0001474!5.46e-19!86;UBERON:0004765!1.26e-17!101;UBERON:0001434!1.26e-17!101;UBERON:0002405!2.25e-14!115;UBERON:0007023!4.12e-14!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.89e-24,98;UBERON:0003061,6.89e-24,98;UBERON:0002371,3.70e-22,76;UBERON:0002193,9.28e-22,108;UBERON:0001474,1.96e-20,82;UBERON:0004765,2.67e-19,90;UBERON:0002405,4.90e-19,93;UBERON:0001434,1.35e-17,100;UBERON:0007023,2.61e-14,114;UBERON:0002204,5.53e-07,167;UBERON:0003081,7.24e-07,203 | |||
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| ||
|short_description=p3@SOS2 | |short_description=p3@SOS2 | ||
}} | }} |
Latest revision as of 03:27, 20 September 2015
Short description: | p3@SOS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SOS2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -34bp_to_ENST00000216373_5end |
EntrezGene: | SOS2 |
HGNC: | 11188 |
UniProt: | Q07890 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.99e-33 | 72 |
granulocyte monocyte progenitor cell | 2.83e-26 | 67 |
myeloid lineage restricted progenitor cell | 1.25e-25 | 66 |
monopoietic cell | 2.56e-25 | 59 |
monocyte | 2.56e-25 | 59 |
monoblast | 2.56e-25 | 59 |
promonocyte | 2.56e-25 | 59 |
defensive cell | 1.52e-23 | 48 |
phagocyte | 1.52e-23 | 48 |
macrophage dendritic cell progenitor | 2.23e-23 | 61 |
classical monocyte | 7.12e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.12e-23 | 42 |
leukocyte | 7.13e-23 | 136 |
nongranular leukocyte | 1.18e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 4.52e-17 | 120 |
myeloid cell | 4.58e-14 | 108 |
common myeloid progenitor | 4.58e-14 | 108 |
hematopoietic stem cell | 5.13e-13 | 168 |
hematopoietic oligopotent progenitor cell | 6.10e-12 | 161 |
hematopoietic multipotent progenitor cell | 6.10e-12 | 161 |
hematopoietic cell | 3.06e-11 | 177 |
granulocyte | 9.52e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.89e-24 | 98 |
blood island | 6.89e-24 | 98 |
bone marrow | 3.70e-22 | 76 |
hemolymphoid system | 9.28e-22 | 108 |
bone element | 1.96e-20 | 82 |
skeletal element | 2.67e-19 | 90 |
immune system | 4.90e-19 | 93 |
skeletal system | 1.35e-17 | 100 |
adult organism | 2.61e-14 | 114 |
musculoskeletal system | 5.53e-07 | 167 |
lateral plate mesoderm | 7.24e-07 | 203 |