FFCP PHASE1:Hg19::chr16:67207872..67207900,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8996 | |EntrezGene=8996 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7869 | |HGNC=7869 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_ENST00000268605_5end | |association_with_transcript=2bp_to_ENST00000268605_5end | ||
|cluster_id=chr16:67207872..67207900,+ | |||
|coexpression_cluster_id=C3583 | |||
|description=CAGE_peak_4_at_NOL3_5end | |description=CAGE_peak_4_at_NOL3_5end | ||
|id=chr16:67207872..67207900,+ | |id=chr16:67207872..67207900,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.92e-09!254 | |ontology_enrichment_celltype=CL:0000066!4.92e-09!254 | ||
|ontology_enrichment_celltype_v019=CL:0000136;8.48e-11;13!CL:0000349;2.28e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.73e-09,19;CL:0000136,3.48e-09,15 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.65e-08;29 | |||
|ontology_enrichment_disease=DOID:305!8.38e-07!106 | |ontology_enrichment_disease=DOID:305!8.38e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.56e-13!115;UBERON:0000475!1.52e-12!365;UBERON:0000468!9.78e-12!659;UBERON:0000062!3.00e-11!511;UBERON:0000064!3.44e-11!219;UBERON:0004119!3.55e-11!169;UBERON:0000925!3.55e-11!169;UBERON:0006595!3.55e-11!169;UBERON:0001004!9.54e-11!72;UBERON:0000481!3.21e-10!347;UBERON:0000077!9.26e-10!130;UBERON:0000480!1.06e-09!626;UBERON:0000467!1.24e-09!625;UBERON:0000065!1.66e-09!53;UBERON:0001007!2.16e-08!155;UBERON:0001555!2.16e-08!155;UBERON:0007026!2.16e-08!155;UBERON:0000922!6.33e-08!612;UBERON:0002050!9.58e-08!605;UBERON:0005423!9.58e-08!605;UBERON:0008947!1.26e-07!38;UBERON:0003258!1.26e-07!38;UBERON:0001041!1.35e-07!98;UBERON:0000923!1.52e-07!604;UBERON:0005291!1.52e-07!604;UBERON:0006598!1.52e-07!604;UBERON:0002532!1.52e-07!604;UBERON:0000477!1.75e-07!286;UBERON:0004921!1.92e-07!129;UBERON:0004185!1.92e-07!129;UBERON:0000072!2.60e-07!46;UBERON:0003104!6.62e-07!238;UBERON:0009142!6.62e-07!238;UBERON:0001737!7.42e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!3.56e-13!115;UBERON:0000475!1.52e-12!365;UBERON:0000468!9.78e-12!659;UBERON:0000062!3.00e-11!511;UBERON:0000064!3.44e-11!219;UBERON:0004119!3.55e-11!169;UBERON:0000925!3.55e-11!169;UBERON:0006595!3.55e-11!169;UBERON:0001004!9.54e-11!72;UBERON:0000481!3.21e-10!347;UBERON:0000077!9.26e-10!130;UBERON:0000480!1.06e-09!626;UBERON:0000467!1.24e-09!625;UBERON:0000065!1.66e-09!53;UBERON:0001007!2.16e-08!155;UBERON:0001555!2.16e-08!155;UBERON:0007026!2.16e-08!155;UBERON:0000922!6.33e-08!612;UBERON:0002050!9.58e-08!605;UBERON:0005423!9.58e-08!605;UBERON:0008947!1.26e-07!38;UBERON:0003258!1.26e-07!38;UBERON:0001041!1.35e-07!98;UBERON:0000923!1.52e-07!604;UBERON:0005291!1.52e-07!604;UBERON:0006598!1.52e-07!604;UBERON:0002532!1.52e-07!604;UBERON:0000477!1.75e-07!286;UBERON:0004921!1.92e-07!129;UBERON:0004185!1.92e-07!129;UBERON:0000072!2.60e-07!46;UBERON:0003104!6.62e-07!238;UBERON:0009142!6.62e-07!238;UBERON:0001737!7.42e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.23e-13;9!UBERON:0001557;3.23e-13;9!UBERON:0000478;2.44e-09;24!UBERON:0005631;4.08e-09;10!UBERON:0000158;4.08e-09;10!UBERON:0000305;6.54e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.81e-13,9;UBERON:0005631,1.87e-11,14;UBERON:0000158,1.87e-11,14;UBERON:0001557,1.22e-09,19;UBERON:0000478,2.04e-09,24;UBERON:0000305,8.81e-08,7;UBERON:0001041,1.75e-07,87;UBERON:0008947,2.41e-07,38;UBERON:0003258,2.41e-07,38;UBERON:0000065,4.20e-07,54;UBERON:0000072,4.61e-07,47;UBERON:0001004,5.86e-07,74 | |||
|phase1_expression=1.45342703416445,3.8538094300377,1.26858963686374,6.00439790118782,2.23480547213644,0,0,0.631719873426831,2.08948502559871,0,2.09340350391728,1.31064823278103,2.11013582582763,0.123766352960047,0.331397375727916,1.34465029290355,0,0,0.487932798790507,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0.919421224478927,2.10844143144775,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0,0.50133791063589,0.434539556882471,0.795285947051099,2.43317435151318,0.0945348171640679,0,0,0.196468613246569,2.5500670180478,3.33705998505986,0,0,0.132957960518865,0,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,0.419499436209906,0,0.417989933073621,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,5.23312862571041,0,0.25326102332916,0.264818361626438,0,0,0.560677600142307,0,1.97334038733728,0,0,0,0,0,0,0.936480230490962,0.570471821544449,0,0.117434498643765,0,0.280901613404497,0.408308342509787,0,1.13658359293342,0,0,0,0.718618141816238,0.168336113954066,0,0.831192346452549,0,0.30648779579902,0.150238058906597,0.340296549480063,0.717558542755448,0.213557388818567,0.211931901159562,0.300091096084402,0.206105058476878,0.257640540045629,0.18611685633159,0.168776332241266,0.194874010322397,0,0.184099797284599,0.161646056818812,0.355009592516614,0,0.169560592310488,0.966304265816484,0.272746120590835,0.286804595389004,0,0,0.348581828608555,0.310983165046111,0,0,0,0,1.38134921352481,0.464367928031979,1.44375896333917,2.12952240071719,1.18009283054671,1.20505514941741,2.53676137284506,2.61455332910887,2.84724742933316,2.15730093056263,2.5508790466295,1.15424147083917,1.4763109092493,1.40241773803446,0.4115740113314,0,0,0.982827216677626,0,0,0.983907508344908,0,0.98775256867763,1.1240175325762,0,0.740707561268237,0,1.03993478527958,0,0.579652024875384,0.117408694235822,0.144366447761074,0,0,0.790204397959275,2.57545848628462,0.492434012174795,0,0,0.93733833986777,0.16798212819886,0,0.626909658919938,0.581267877027924,0,0,0,0.207328115540772,0.144119953416961,0,0.126995788584338,0,1.17217447210047,1.71072446022705,0.411309970813294,0.300343057843917,0,0,0,0,0.129271715757778,0,0,1.32969058292435,0,0,0,0.266422179016099,1.28680194292333,1.62786481617433,0,0.325736184293735,1.77695974371273,0.791951872933429,0.301439377059586,0,0,0,0.502257091432126,0,0.239624855491583,0,0,0.723906533337896,1.02738161275192,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0,0.601892199455438,4.5481500811197,0,0,0.184369168541703,0.0868836144680828,1.37060810223918,0,0,0,0,2.12189300012382,1.66435439510497,2.11673205330776,0,0.306923946576125,0.561320188866147,0.384417447767103,1.53512174720011,0.160853921143607,1.48418066444991,0.154209693802656,0,0,0,0.116210378459959,0.362578348774867,2.80709058424599,0.552485933615378,0.114814448164607,0,0.131124414959424,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,1.08378575017541,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,0.515205058238611,0.366277859273374,0.247528499761764,1.14853107599234,0.650060246036521,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.0890320356467374,0.826424576804891,0.768760269460425,2.4246415373971,0.708104465988849,0,0,0.6970372701606,0,1.06461206063404,0,0.37064843820784,0.429374660225974,0,0,0.38126038784765,0.511795582622668,0.42793898803392,0,0.78494864019923,0,0,0.235624804691373,0,1.58510321173008,0,0,0,0,0,0.282810863907425,1.13008116620243,0,0.66343897524122,0.438450885253763,0,0,1.01455188481352,0.30982349809975,0,0,0.0982490410131212,0.35667105148125,1.06428319221179,0,1.31717957183961,0.379473173765715,0.349934720244983,0.769776901804097,0.670302275535787,1.08890984861323,0.282431402330337,0,3.36942951335251,2.21715076768338,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.748562161632879,0.879049075631364,0,0,0,4.29740072527842,1.18785872333055,12.9007494881677,0.994147647766298,0.562677665642051,0.333926115068718,0.988823245360557,0,0.398495976502139,0.276283915531148,0.503865495708552,0.102268682502155,0.123084805461069,0.622079175323615,0.359473404589307,0.358042349351218,0,0.690503839458535,0,0,0.969332746095218,0.649376687132959,0,0.7812832832557,2.18649999990489,0,2.61724931056649,1.01701460117107,2.12748913591143,0.344743373241465,0,0.173624994933292,0,0.361789315876224,0,0.663475559587348,0.886642856860642,0.87754158861589,0.544692317594951,0.697118721393016,1.07730361905316,0,0,0,0,2.23300811812344,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0.707660516026713,1.22206028986725,0.593042257361244,1.35920332841153,1.8795950910982,0.134802265961354,3.21031058919516,0.937057782901357,0,0.391329237864179,1.21390189767046,0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| ||
|short_description=p4@NOL3 | |short_description=p4@NOL3 | ||
}} | }} |
Latest revision as of 09:58, 17 September 2015
Short description: | p4@NOL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NOL3_5end |
Coexpression cluster: | C3583_large_mature_amniotic_heart_renal_Esophageal_breast |
Association with transcript: | 2bp_to_ENST00000268605_5end |
EntrezGene: | NOL3 |
HGNC: | 7869 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.73e-09 | 19 |
fat cell | 3.48e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.81e-13 | 9 |
extraembryonic membrane | 1.87e-11 | 14 |
membranous layer | 1.87e-11 | 14 |
upper respiratory tract | 1.22e-09 | 19 |
extraembryonic structure | 2.04e-09 | 24 |
amnion | 8.81e-08 | 7 |
foregut | 1.75e-07 | 87 |
respiratory primordium | 2.41e-07 | 38 |
endoderm of foregut | 2.41e-07 | 38 |
respiratory tract | 4.20e-07 | 54 |
segment of respiratory tract | 4.61e-07 | 47 |
respiratory system | 5.86e-07 | 74 |