FFCP PHASE1:Hg19::chr19:54705025..54705034,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6203 | |EntrezGene=6203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10442 | |HGNC=10442 | ||
|TSSclassifier=strong | |||
|UniProt=C9JM19 | |UniProt=C9JM19 | ||
|association_with_transcript=0bp_to_ENST00000441429,ENST00000460761,uc002qeb.2,uc002qec.2,uc002qed.1_5end | |association_with_transcript=0bp_to_ENST00000441429,ENST00000460761,uc002qeb.2,uc002qec.2,uc002qed.1_5end | ||
|cluster_id=chr19:54705025..54705034,+ | |||
|coexpression_cluster_id=C364 | |||
|description=CAGE_peak_7_at_RPS9_5end | |description=CAGE_peak_7_at_RPS9_5end | ||
|id=chr19:54705025..54705034,+ | |id=chr19:54705025..54705034,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.06e-54!42;CL:0000860!4.30e-50!45;CL:0000839!3.55e-41!70;CL:0000557!2.11e-40!71;CL:0002009!2.69e-37!65;CL:0000766!3.93e-35!76;CL:0002194!6.45e-35!63;CL:0000576!6.45e-35!63;CL:0000040!6.45e-35!63;CL:0000559!6.45e-35!63;CL:0000763!2.19e-28!112;CL:0000049!2.19e-28!112;CL:0002031!7.14e-24!124;CL:0000738!2.57e-20!140;CL:0002032!5.72e-18!165;CL:0000837!5.72e-18!165;CL:0000037!1.91e-17!172;CL:0000566!1.91e-17!172;CL:0002087!1.14e-16!119;CL:0000988!1.52e-15!182;CL:0000134!9.46e-07!358 | |ontology_enrichment_celltype=CL:0002057!1.06e-54!42;CL:0000860!4.30e-50!45;CL:0000839!3.55e-41!70;CL:0000557!2.11e-40!71;CL:0002009!2.69e-37!65;CL:0000766!3.93e-35!76;CL:0002194!6.45e-35!63;CL:0000576!6.45e-35!63;CL:0000040!6.45e-35!63;CL:0000559!6.45e-35!63;CL:0000763!2.19e-28!112;CL:0000049!2.19e-28!112;CL:0002031!7.14e-24!124;CL:0000738!2.57e-20!140;CL:0002032!5.72e-18!165;CL:0000837!5.72e-18!165;CL:0000037!1.91e-17!172;CL:0000566!1.91e-17!172;CL:0002087!1.14e-16!119;CL:0000988!1.52e-15!182;CL:0000134!9.46e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.01e-95;33!CL:0002057;7.01e-95;33!CL:0000473;9.26e-71;39!CL:0000234;9.26e-71;39!CL:0000576;8.32e-51;48!CL:0000766;2.11e-36;69!CL:0000763;6.53e-15;100!CL:0002087;1.93e-10;104!CL:0000738;3.45e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.71e-93,42;CL:0002057,5.71e-93,42;CL:0000473,3.76e-86,48;CL:0000234,3.76e-86,48;CL:0000839,6.30e-72,66;CL:0002194,1.92e-67,59;CL:0000576,1.92e-67,59;CL:0000040,1.92e-67,59;CL:0000559,1.92e-67,59;CL:0000557,1.34e-66,67;CL:0000766,1.04e-65,72;CL:0002009,5.00e-65,61;CL:0000763,4.80e-44,108;CL:0000049,4.80e-44,108;CL:0002031,2.53e-36,120;CL:0000738,2.22e-33,136;CL:0002087,2.68e-31,115;CL:0000037,3.00e-27,168;CL:0002032,5.20e-27,161;CL:0000837,5.20e-27,161;CL:0000988,1.85e-25,177;CL:0000134,2.85e-10,354;CL:0002320,6.56e-10,361;CL:0000048,2.69e-09,427;CL:0000723,4.80e-09,433;CL:0000034,1.02e-08,441;CL:0000219,1.22e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.26e-68;42!CL:0000049;3.00e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.19e-34!80;UBERON:0001474!1.20e-30!86;UBERON:0004765!7.41e-28!101;UBERON:0001434!7.41e-28!101;UBERON:0002390!1.82e-23!102;UBERON:0003061!1.82e-23!102;UBERON:0002193!3.58e-22!112;UBERON:0002405!3.39e-21!115;UBERON:0002204!1.12e-15!167;UBERON:0001737!3.54e-12!9;UBERON:0003081!1.46e-08!216 | |ontology_enrichment_uberon=UBERON:0002371!4.19e-34!80;UBERON:0001474!1.20e-30!86;UBERON:0004765!7.41e-28!101;UBERON:0001434!7.41e-28!101;UBERON:0002390!1.82e-23!102;UBERON:0003061!1.82e-23!102;UBERON:0002193!3.58e-22!112;UBERON:0002405!3.39e-21!115;UBERON:0002204!1.12e-15!167;UBERON:0001737!3.54e-12!9;UBERON:0003081!1.46e-08!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.46e-58,76;UBERON:0001474,3.58e-53,82;UBERON:0004765,8.08e-48,90;UBERON:0002405,4.79e-46,93;UBERON:0002390,2.49e-43,98;UBERON:0003061,2.49e-43,98;UBERON:0001434,2.56e-42,100;UBERON:0002193,1.21e-38,108;UBERON:0002204,1.33e-27,167;UBERON:0003081,2.74e-21,203;UBERON:0000926,9.44e-12,315;UBERON:0004120,9.44e-12,315;UBERON:0006603,9.44e-12,315;UBERON:0002384,2.04e-09,371 | |||
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| ||
|short_description=p7@RPS9 | |short_description=p7@RPS9 | ||
}} | }} |
Latest revision as of 21:33, 19 September 2015
Short description: | p7@RPS9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RPS9_5end |
Coexpression cluster: | C364_CD14_immature_CD14CD16_Aortic_CD4_Reticulocytes_Basophils |
Association with transcript: | 0bp_to_ENST00000441429, ENST00000460761, uc002qeb.2, uc002qec.2, uc002qed.1_5end |
EntrezGene: | RPS9 |
HGNC: | 10442 |
UniProt: | C9JM19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.71e-93 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.71e-93 | 42 |
defensive cell | 3.76e-86 | 48 |
phagocyte | 3.76e-86 | 48 |
myeloid lineage restricted progenitor cell | 6.30e-72 | 66 |
monopoietic cell | 1.92e-67 | 59 |
monocyte | 1.92e-67 | 59 |
monoblast | 1.92e-67 | 59 |
promonocyte | 1.92e-67 | 59 |
granulocyte monocyte progenitor cell | 1.34e-66 | 67 |
myeloid leukocyte | 1.04e-65 | 72 |
macrophage dendritic cell progenitor | 5.00e-65 | 61 |
myeloid cell | 4.80e-44 | 108 |
common myeloid progenitor | 4.80e-44 | 108 |
hematopoietic lineage restricted progenitor cell | 2.53e-36 | 120 |
leukocyte | 2.22e-33 | 136 |
nongranular leukocyte | 2.68e-31 | 115 |
hematopoietic stem cell | 3.00e-27 | 168 |
hematopoietic oligopotent progenitor cell | 5.20e-27 | 161 |
hematopoietic multipotent progenitor cell | 5.20e-27 | 161 |
hematopoietic cell | 1.85e-25 | 177 |
mesenchymal cell | 2.85e-10 | 354 |
connective tissue cell | 6.56e-10 | 361 |
multi fate stem cell | 2.69e-09 | 427 |
somatic stem cell | 4.80e-09 | 433 |
stem cell | 1.02e-08 | 441 |
motile cell | 1.22e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.46e-58 | 76 |
bone element | 3.58e-53 | 82 |
skeletal element | 8.08e-48 | 90 |
immune system | 4.79e-46 | 93 |
hematopoietic system | 2.49e-43 | 98 |
blood island | 2.49e-43 | 98 |
skeletal system | 2.56e-42 | 100 |
hemolymphoid system | 1.21e-38 | 108 |
musculoskeletal system | 1.33e-27 | 167 |
lateral plate mesoderm | 2.74e-21 | 203 |
mesoderm | 9.44e-12 | 315 |
mesoderm-derived structure | 9.44e-12 | 315 |
presumptive mesoderm | 9.44e-12 | 315 |
connective tissue | 2.04e-09 | 371 |