FFCP PHASE1:Hg19::chr20:4681869..4681942,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:4681869..4681942,+ | |||
|coexpression_cluster_id=C452 | |||
|description=CAGE_peak_at_chr20:4681869..4681942,+ | |description=CAGE_peak_at_chr20:4681869..4681942,+ | ||
|id=chr20:4681869..4681942,+ | |id=chr20:4681869..4681942,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.47e-07!42 | |ontology_enrichment_celltype=CL:0002057!7.47e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.79e-14;33!CL:0002057;2.79e-14;33!CL:0000473;7.09e-11;39!CL:0000234;7.09e-11;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.11e-11,42;CL:0002057,1.11e-11,42;CL:0000473,1.07e-09,48;CL:0000234,1.07e-09,48;CL:0002194,5.80e-07,59;CL:0000576,5.80e-07,59;CL:0000040,5.80e-07,59;CL:0000559,5.80e-07,59;CL:0000839,9.85e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;2.25e-09;42!UBERON:0006601;1.53e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;1.79e-17;41!UBERON:0001890;1.79e-17;41!UBERON:0003528;6.45e-17;34!UBERON:0002020;6.45e-17;34!UBERON:0002791;7.98e-17;32!UBERON:0000125;2.14e-16;9!UBERON:0002308;2.14e-16;9!UBERON:0000073;2.02e-15;53!UBERON:0002616;2.02e-15;53!UBERON:0001869;1.03e-14;32!UBERON:0001893;5.79e-14;34!UBERON:0002420;1.52e-12;9!UBERON:0007245;1.52e-12;9!UBERON:0010009;1.52e-12;9!UBERON:0010011;1.52e-12;9!UBERON:0000454;1.52e-12;9!UBERON:0009663;6.03e-12;7!UBERON:0002619;1.03e-11;22!UBERON:0001017;4.79e-11;75!UBERON:0000955;4.37e-10;68!UBERON:0000956;4.78e-10;25!UBERON:0000203;4.78e-10;25!UBERON:0001894;1.20e-08;7!UBERON:0005383;1.45e-08;3!UBERON:0005382;1.45e-08;3!UBERON:0001950;1.45e-08;20!UBERON:0001016;3.54e-08;83!UBERON:0000200;2.78e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.61e-29,56;UBERON:0005068,4.61e-29,56;UBERON:0006241,4.61e-29,56;UBERON:0007135,4.61e-29,56;UBERON:0000073,1.34e-26,53;UBERON:0002616,1.34e-26,53;UBERON:0002780,2.15e-23,41;UBERON:0001890,2.15e-23,41;UBERON:0003080,2.15e-23,41;UBERON:0006240,2.15e-23,41;UBERON:0000955,6.27e-22,68;UBERON:0006238,6.27e-22,68;UBERON:0001017,6.99e-22,81;UBERON:0003075,1.11e-21,82;UBERON:0007284,1.11e-21,82;UBERON:0003528,1.37e-21,34;UBERON:0002020,1.37e-21,34;UBERON:0002346,2.93e-20,86;UBERON:0001016,3.12e-20,89;UBERON:0002791,3.76e-18,32;UBERON:0007023,4.71e-18,114;UBERON:0001893,7.74e-17,34;UBERON:0000125,3.08e-16,9;UBERON:0002308,3.08e-16,9;UBERON:0001869,3.46e-16,32;UBERON:0010371,3.04e-15,104;UBERON:0003056,3.21e-15,61;UBERON:0002420,2.14e-12,9;UBERON:0007245,2.14e-12,9;UBERON:0010009,2.14e-12,9;UBERON:0010011,2.14e-12,9;UBERON:0000454,2.14e-12,9;UBERON:0010314,3.59e-12,132;UBERON:0009663,8.73e-12,7;UBERON:0002619,9.49e-12,22;UBERON:0004121,1.10e-10,171;UBERON:0000924,1.10e-10,171;UBERON:0006601,1.10e-10,171;UBERON:0000956,4.45e-10,25;UBERON:0000203,4.45e-10,25;UBERON:0001894,1.09e-08,7;UBERON:0006222,1.09e-08,7;UBERON:0005383,1.28e-08,3;UBERON:0005382,1.28e-08,3;UBERON:0001950,1.36e-08,20;UBERON:0000200,2.43e-07,6;UBERON:0003076,5.86e-07,15;UBERON:0003057,5.86e-07,15;UBERON:0000025,7.27e-07,192 | |||
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| ||
|short_description=p@chr20:4681869..4681942,+ | |short_description=p@chr20:4681869..4681942,+ | ||
}} | }} |
Latest revision as of 14:52, 28 July 2015
Short description: | p@chr20:4681869..4681942, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:4681869..4681942, + |
Coexpression cluster: | C452_hippocampus_locus_middle_pineal_occipital_thalamus_cerebral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.11e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.11e-11 | 42 |
defensive cell | 1.07e-09 | 48 |
phagocyte | 1.07e-09 | 48 |
monopoietic cell | 5.80e-07 | 59 |
monocyte | 5.80e-07 | 59 |
monoblast | 5.80e-07 | 59 |
promonocyte | 5.80e-07 | 59 |
myeloid lineage restricted progenitor cell | 9.85e-07 | 66 |