FFCP PHASE1:Hg19::chr10:17069083..17069102,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:17069083..17069102,- | |||
|coexpression_cluster_id=C8 | |coexpression_cluster_id=C8 | ||
|description=CAGE_peak_at_chr10:17069083..17069102,- | |description=CAGE_peak_at_chr10:17069083..17069102,- | ||
|id=chr10:17069083..17069102,- | |id=chr10:17069083..17069102,- | ||
|ontology_enrichment_celltype=CL:0000738!1.84e-18!140;CL:0002031!5.95e-17!124;CL:0000624!2.43e-16!6;CL:0002032!1.57e-14!165;CL:0000837!1.57e-14!165;CL:0000037!1.22e-13!172;CL:0000566!1.22e-13!172;CL:0000988!1.39e-13!182;CL:0000623!4.35e-13!3;CL:0000825!4.35e-13!3;CL:0000791!6.08e-13!18;CL:0000789!6.08e-13!18;CL:0002420!6.08e-13!18;CL:0002419!6.08e-13!18;CL:0000790!6.08e-13!18;CL:0000767!1.29e-12!3;CL:0002087!2.07e-12!119;CL:0000766!2.58e-11!76;CL:0002057!4.05e-10!42;CL:0000134!1.15e-09!358;CL:0000557!2.29e-09!71;CL:0002320!2.68e-09!365;CL:0000860!2.81e-09!45;CL:0000084!6.44e-09!25;CL:0000827!6.44e-09!25;CL:0000838!1.98e-08!52;CL:0000839!3.15e-08!70;CL:0000542!3.20e-08!53;CL:0000051!3.20e-08!53;CL:0000219!5.33e-08!390;CL:0000763!2.34e-07!112;CL:0000049!2.34e-07!112;CL:0002274!3.87e-07!5;CL:0000457!3.87e-07!5;CL:0002191!3.87e-07!5;CL:0000097!3.87e-07!5;CL:0000831!3.87e-07!5;CL:0002028!3.87e-07!5;CL:0000034!4.04e-07!444;CL:0000048!5.05e-07!430;CL:0002393!5.20e-07!9;CL:0002397!5.20e-07!9;CL:0000723!8.56e-07!436 | |ontology_enrichment_celltype=CL:0000738!1.84e-18!140;CL:0002031!5.95e-17!124;CL:0000624!2.43e-16!6;CL:0002032!1.57e-14!165;CL:0000837!1.57e-14!165;CL:0000037!1.22e-13!172;CL:0000566!1.22e-13!172;CL:0000988!1.39e-13!182;CL:0000623!4.35e-13!3;CL:0000825!4.35e-13!3;CL:0000791!6.08e-13!18;CL:0000789!6.08e-13!18;CL:0002420!6.08e-13!18;CL:0002419!6.08e-13!18;CL:0000790!6.08e-13!18;CL:0000767!1.29e-12!3;CL:0002087!2.07e-12!119;CL:0000766!2.58e-11!76;CL:0002057!4.05e-10!42;CL:0000134!1.15e-09!358;CL:0000557!2.29e-09!71;CL:0002320!2.68e-09!365;CL:0000860!2.81e-09!45;CL:0000084!6.44e-09!25;CL:0000827!6.44e-09!25;CL:0000838!1.98e-08!52;CL:0000839!3.15e-08!70;CL:0000542!3.20e-08!53;CL:0000051!3.20e-08!53;CL:0000219!5.33e-08!390;CL:0000763!2.34e-07!112;CL:0000049!2.34e-07!112;CL:0002274!3.87e-07!5;CL:0000457!3.87e-07!5;CL:0002191!3.87e-07!5;CL:0000097!3.87e-07!5;CL:0000831!3.87e-07!5;CL:0002028!3.87e-07!5;CL:0000034!4.04e-07!444;CL:0000048!5.05e-07!430;CL:0002393!5.20e-07!9;CL:0002397!5.20e-07!9;CL:0000723!8.56e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000623;1.21e-36;3!CL:0000767;3.20e-35;3!CL:0000791;2.30e-23;18!CL:0000789;2.30e-23;18!CL:0002419;2.30e-23;18!CL:0000624;2.86e-18;6!CL:0002393;7.97e-18;6!CL:0002397;7.97e-18;6!CL:0000084;9.53e-17;25!CL:0000094;1.21e-13;8!CL:0000625;2.14e-10;11!CL:0000081;4.43e-10;11!CL:0000542;4.86e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.29e-36,3;CL:0000825,1.29e-36,3;CL:0000767,3.60e-35,3;CL:0000791,2.17e-23,18;CL:0000789,2.17e-23,18;CL:0002420,2.17e-23,18;CL:0002419,2.17e-23,18;CL:0000790,2.17e-23,18;CL:0000738,5.60e-20,136;CL:0000624,2.62e-18,6;CL:0000838,1.70e-17,52;CL:0000542,3.79e-17,53;CL:0000051,3.79e-17,53;CL:0000084,9.14e-17,25;CL:0000827,9.14e-17,25;CL:0002032,1.35e-16,161;CL:0000837,1.35e-16,161;CL:0000037,7.93e-16,168;CL:0002087,1.96e-15,115;CL:0000988,6.30e-15,177;CL:0002031,1.00e-14,120;CL:0000094,1.27e-13,8;CL:0002393,3.98e-12,9;CL:0002397,3.98e-12,9;CL:0000625,2.14e-10,11;CL:0000081,4.57e-10,11;CL:0000766,4.06e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000790;2.30e-23;18!CL:0000051;4.86e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!8.55e-09!375;UBERON:0002371!6.17e-08!80;UBERON:0002390!2.24e-07!102;UBERON:0003061!2.24e-07!102;UBERON:0001474!3.75e-07!86 | |ontology_enrichment_uberon=UBERON:0002384!8.55e-09!375;UBERON:0002371!6.17e-08!80;UBERON:0002390!2.24e-07!102;UBERON:0003061!2.24e-07!102;UBERON:0001474!3.75e-07!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr10:17069083..17069102,- | |short_description=p@chr10:17069083..17069102,- | ||
}} | }} |
Latest revision as of 12:11, 23 July 2015
Short description: | p@chr10:17069083..17069102, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17069083..17069102, - |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.29e-36 | 3 |
pro-NK cell | 1.29e-36 | 3 |
basophil | 3.60e-35 | 3 |
mature alpha-beta T cell | 2.17e-23 | 18 |
alpha-beta T cell | 2.17e-23 | 18 |
immature T cell | 2.17e-23 | 18 |
mature T cell | 2.17e-23 | 18 |
immature alpha-beta T cell | 2.17e-23 | 18 |
leukocyte | 5.60e-20 | 136 |
CD4-positive, alpha-beta T cell | 2.62e-18 | 6 |
lymphoid lineage restricted progenitor cell | 1.70e-17 | 52 |
lymphocyte | 3.79e-17 | 53 |
common lymphoid progenitor | 3.79e-17 | 53 |
T cell | 9.14e-17 | 25 |
pro-T cell | 9.14e-17 | 25 |
hematopoietic oligopotent progenitor cell | 1.35e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.35e-16 | 161 |
hematopoietic stem cell | 7.93e-16 | 168 |
nongranular leukocyte | 1.96e-15 | 115 |
hematopoietic cell | 6.30e-15 | 177 |
hematopoietic lineage restricted progenitor cell | 1.00e-14 | 120 |
granulocyte | 1.27e-13 | 8 |
intermediate monocyte | 3.98e-12 | 9 |
CD14-positive, CD16-positive monocyte | 3.98e-12 | 9 |
CD8-positive, alpha-beta T cell | 2.14e-10 | 11 |
blood cell | 4.57e-10 | 11 |
myeloid leukocyte | 4.06e-07 | 72 |