FFCP PHASE1:Hg19::chr11:101980791..101980865,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10413 | |EntrezGene=10413 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16262 | |HGNC=16262 | ||
|TSSclassifier=strong | |||
|UniProt=E9PRV2,E3WEB6,P46937,Q86T74 | |UniProt=E9PRV2,E3WEB6,P46937,Q86T74 | ||
|association_with_transcript=-326bp_to_ENST00000282441,ENST00000526343,NM_001130145,NM_001195044,NM_006106_5end | |association_with_transcript=-326bp_to_ENST00000282441,ENST00000526343,NM_001130145,NM_001195044,NM_006106_5end | ||
|cluster_id=chr11:101980791..101980865,+ | |||
|coexpression_cluster_id=C3068 | |coexpression_cluster_id=C3068 | ||
|description=CAGE_peak_4_at_YAP1_5end | |description=CAGE_peak_4_at_YAP1_5end | ||
|id=chr11:101980791..101980865,+ | |id=chr11:101980791..101980865,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.01e-14!180;CL:0000057!4.41e-12!75;CL:0000066!1.70e-08!254;CL:0000223!2.20e-08!59;CL:0000220!7.24e-08!246;CL:0002321!9.85e-08!248;CL:0002620!2.94e-07!23 | |ontology_enrichment_celltype=CL:0000055!3.01e-14!180;CL:0000057!4.41e-12!75;CL:0000066!1.70e-08!254;CL:0000223!2.20e-08!59;CL:0000220!7.24e-08!246;CL:0002321!9.85e-08!248;CL:0002620!2.94e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.81e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.34e-12,76;CL:0000223,6.76e-09,58;CL:0000066,9.19e-08,253;CL:0002620,2.49e-07,23;CL:0002321,7.83e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!6.81e-07!143 | |ontology_enrichment_disease=DOID:0050687!6.81e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.24e-08;9!UBERON:0001557;9.24e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.69e-20,160;UBERON:0000925,9.69e-20,160;UBERON:0006595,9.69e-20,160;UBERON:0001007,1.22e-17,145;UBERON:0001555,1.22e-17,145;UBERON:0007026,1.22e-17,145;UBERON:0002100,4.41e-16,199;UBERON:0004921,1.16e-13,118;UBERON:0005256,5.88e-12,122;UBERON:0003102,5.92e-12,99;UBERON:0003104,7.25e-12,160;UBERON:0009142,7.25e-12,160;UBERON:0001048,4.51e-10,160;UBERON:0005911,9.16e-09,82;UBERON:0001041,1.05e-08,87;UBERON:0001004,4.20e-08,74;UBERON:0005156,7.72e-08,59;UBERON:0000990,7.72e-08,59;UBERON:0005177,8.98e-08,101;UBERON:0000490,9.61e-08,148;UBERON:0001737,1.06e-07,9;UBERON:0009569,2.27e-07,112;UBERON:0008947,4.62e-07,38;UBERON:0003258,4.62e-07,38;UBERON:0000486,5.43e-07,83;UBERON:0002199,5.75e-07,46;UBERON:0002416,5.75e-07,46;UBERON:0003929,9.04e-07,54 | |||
|phase1_expression=5.26867299884614,4.49611100171065,5.3562673556469,3.00219895059391,4.46961094427288,4.36169262050184,2.53299878168311,5.05375898741465,2.87304191019822,3.68600904752263,5.58240934377942,11.5773927228991,6.59417445571134,2.10402800032079,2.31978163009541,7.39557661096953,6.02694528023977,5.11217063271161,5.36726078669558,2.46242116153576,3.26401105990805,0.940364164434263,1.14494394852423,2.05311637609326,2.51085279189606,0,0,0,0,0,0.154816123316076,6.43594857135249,5.72291245678675,3.32778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.01210257911091,3.83587685530591,1.44575660953827,3.50936537445123,4.49024208778554,1.5905718941022,1.45990461090791,2.45790524626576,1.77383517970051,2.81071314218003,3.07800827419625,1.45718115317017,1.11235332835329,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,2.26123176769604,0.419499436209906,1.10047216776027,0.417989933073621,0,1.42306505074684,1.00416183829401,0.402829317109147,3.80136052859256,0.24406205754817,1.83831540172934,0,1.69669483739752,2.46982309888787,2.25222960966644,1.53316637465883,3.79706263827252,2.01521918323448,0,0,6.10531672999548,5.96366342034382,3.92554586160197,2.51577443545116,4.87622255272983,6.73869926176878,2.24271040056923,1.06748995729705,3.45334567784024,5.91300967259556,3.09834545760283,4.41347138406339,4.08665054641315,2.88087962239999,1.64025002283658,4.37024107562449,2.85235910772225,3.73621701379503,4.11020745253177,8.41739310714284,5.33713065468544,4.69554593886255,7.86139630795315,5.26961483996404,9.50402285825643,6.18167323196392,3.64064544775211,7.18618141816238,5.55509176048418,4.75450375513464,6.64953877162039,2.63386572528503,2.14541457059314,4.35690370829131,2.94923676216055,6.27863724911017,3.41691822109708,4.4505699243508,5.10154863343484,5.04957393268351,4.89517026086695,5.21127197728451,5.06328996723799,4.77441325289873,5.04867548488229,5.52299391853796,6.14255015911485,4.26011511019937,3.72782763442269,6.95198428472999,3.47869535693934,2.45471508531751,5.44928731239107,1.09776335516636,2.65059536642971,2.32387885739037,2.17688215532278,2.77552935963191,4.01475094983413,3.12899064659632,3.85944562915731,2.76269842704961,2.3218396401599,0,17.7460200059766,13.6553598963262,19.0398713607951,15.5514501552675,23.0952210737951,14.2362371466658,12.5393116588953,18.0523747915318,13.8508976500701,3.69077727312324,5.60967095213783,1.6462960453256,2.94017422771084,5.07020139287323,7.86261773342101,4.72631925345123,0,3.93563003337963,2.74508496477641,5.48751427043128,6.74410519545717,3.9206299240536,3.24059558054854,2.93227474779292,1.03993478527958,1.44331342025273,2.43453850447661,3.28744343860301,0.866198686566443,0.462985512576611,2.09279567458058,1.58040879591855,0.858486162094873,0,0,0,1.87467667973554,4.36753533317035,3.96970272278682,3.22410681730254,5.81267877027924,5.75074018747817,0,0,0.207328115540772,0,0,2.41291998310242,3.05590740446622,1.17217447210047,1.71072446022705,3.90744472272629,6.60754727256618,4.28739648945867,6.72786506072164,3.05172048183296,4.62031200671985,4.91232519879556,7.15312891703765,0,4.78688609852767,4.16029747645464,1.80045161983499,2.83698264046557,2.39779961114489,3.28849385413739,3.25572963234866,1.64648067356154,3.58309802723109,2.13235169245527,3.16780749173372,5.42590878707255,3.48613383440118,6.69819040919782,0,0,0,4.0736225433569,3.44585807502342,14.2636905040718,2.46128221334885,3.49309748335652,3.04403637507822,0,0,0,0,2.28685161800217,3.90419561572865,0,0.335032530668698,0,0,0,0,1.47229790062968,2.50085260529839,2.98391526069709,4.99130067673937,2.67643483195743,5.51958452618771,7.1456263145555,3.91229929646035,4.5481500811197,2.0694614258501,2.65690239414175,3.87175253937577,5.12613325361689,1.95801157462741,2.05886054286514,0,0,0,3.33440328590885,1.66435439510497,4.5358543999452,5.70647957983187,4.14347327877769,3.92924132206303,6.91951405980785,3.58195074346692,3.86049410744658,5.93672265779964,4.93471020168498,5.14929003408069,6.57017248110473,7.78881643775432,5.81051892299796,6.04297247958111,6.01519410909855,5.15653538041019,1.95184561879831,4.91646153618136,3.01586154406675,4.06079651616671,4.62092022626489,5.49044838423799,0,2.95544560900052,0,0.680374821106063,4.53423423814493,0,3.52230368807009,1.50506932156456,5.09752546090077,1.66215201785745,3.58199607555485,0,0,1.79515087581472,1.64007322849853,2.92840555197873,2.67906630284078,2.38080608527693,1.23764249880882,4.01985876597321,2.60024098414608,0,5.31688950606671,3.23502095940753,3.53058451870098,3.44591431211326,3.54486808065303,3.19036726611303,2.98293195956353,2.22580089116843,3.8015530533025,5.18913181885787,9.44334072459923,4.8555734810664,6.04299214086472,3.77774816196768,4.1822236209636,2.15623506123262,1.06461206063404,0.869932992075073,2.40921484835096,2.00374841438788,2.60510858551767,3.48017367190598,5.71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| ||
|short_description=p4@YAP1 | |short_description=p4@YAP1 | ||
}} | }} |
Latest revision as of 16:19, 24 September 2015
Short description: | p4@YAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_YAP1_5end |
Coexpression cluster: | C3068_epidermoid_pharyngeal_aorta_amniotic_chorionic_Hep2_mature |
Association with transcript: | -326bp_to_ENST00000282441, ENST00000526343, NM_001130145, NM_001195044, NM_006106_5end |
EntrezGene: | YAP1 |
HGNC: | 16262 |
UniProt: | E9PRV2E3WEB6P46937Q86T74 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.34e-12 | 76 |
endodermal cell | 6.76e-09 | 58 |
epithelial cell | 9.19e-08 | 253 |
skin fibroblast | 2.49e-07 | 23 |
embryonic cell | 7.83e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 9.69e-20 | 160 |
endoderm | 9.69e-20 | 160 |
presumptive endoderm | 9.69e-20 | 160 |
digestive system | 1.22e-17 | 145 |
digestive tract | 1.22e-17 | 145 |
primitive gut | 1.22e-17 | 145 |
trunk | 4.41e-16 | 199 |
subdivision of digestive tract | 1.16e-13 | 118 |
trunk mesenchyme | 5.88e-12 | 122 |
surface structure | 5.92e-12 | 99 |
mesenchyme | 7.25e-12 | 160 |
entire embryonic mesenchyme | 7.25e-12 | 160 |
primordium | 4.51e-10 | 160 |
endo-epithelium | 9.16e-09 | 82 |
foregut | 1.05e-08 | 87 |
respiratory system | 4.20e-08 | 74 |
reproductive structure | 7.72e-08 | 59 |
reproductive system | 7.72e-08 | 59 |
trunk region element | 8.98e-08 | 101 |
unilaminar epithelium | 9.61e-08 | 148 |
larynx | 1.06e-07 | 9 |
subdivision of trunk | 2.27e-07 | 112 |
respiratory primordium | 4.62e-07 | 38 |
endoderm of foregut | 4.62e-07 | 38 |
multilaminar epithelium | 5.43e-07 | 83 |
integument | 5.75e-07 | 46 |
integumental system | 5.75e-07 | 46 |
gut epithelium | 9.04e-07 | 54 |