FFCP PHASE1:Hg19::chr13:49086184..49086191,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:49086184..49086191,- | |||
|coexpression_cluster_id=C121 | |coexpression_cluster_id=C121 | ||
|description=CAGE_peak_at_chr13:49086184..49086191,- | |description=CAGE_peak_at_chr13:49086184..49086191,- | ||
|id=chr13:49086184..49086191,- | |id=chr13:49086184..49086191,- | ||
|ontology_enrichment_celltype=CL:0000840!2.89e-10!5;CL:0001029!2.89e-10!5;CL:0002127!4.28e-08!1;CL:0000914!4.28e-08!1;CL:0000911!4.28e-08!1;CL:0000814!4.28e-08!1;CL:0002042!4.28e-08!1;CL:0002039!4.28e-08!1;CL:0002040!4.28e-08!1;CL:0002041!4.28e-08!1;CL:0002379!6.37e-08!1;CL:0000990!5.47e-07!8 | |ontology_enrichment_celltype=CL:0000840!2.89e-10!5;CL:0001029!2.89e-10!5;CL:0002127!4.28e-08!1;CL:0000914!4.28e-08!1;CL:0000911!4.28e-08!1;CL:0000814!4.28e-08!1;CL:0002042!4.28e-08!1;CL:0002039!4.28e-08!1;CL:0002040!4.28e-08!1;CL:0002041!4.28e-08!1;CL:0002379!6.37e-08!1;CL:0000990!5.47e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002127;1.23e-66;1!CL:0000911;1.23e-66;1!CL:0000814;1.23e-66;1!CL:0000775;3.27e-23;3!CL:0000840;2.74e-12;5!CL:0000094;1.35e-09;8!CL:0000990;1.21e-08;8!CL:0000081;2.47e-07;11!CL:0000451;2.63e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.23e-66,1;CL:0000914,1.23e-66,1;CL:0000911,1.23e-66,1;CL:0000814,1.23e-66,1;CL:0002042,1.23e-66,1;CL:0002039,1.23e-66,1;CL:0002040,1.23e-66,1;CL:0002041,1.23e-66,1;CL:0000893,3.61e-34,2;CL:0002489,3.61e-34,2;CL:0000809,3.61e-34,2;CL:0000808,3.61e-34,2;CL:0000894,3.61e-34,2;CL:0000806,3.61e-34,2;CL:0000807,3.61e-34,2;CL:0000805,3.61e-34,2;CL:0002425,3.61e-34,2;CL:0000775,3.27e-23,3;CL:0000840,2.74e-12,5;CL:0001029,2.74e-12,5;CL:0000094,1.35e-09,8;CL:0000990,1.21e-08,8;CL:0000081,2.47e-07,11;CL:0000451,2.63e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002425;3.61e-34;2 | |||
|ontology_enrichment_disease=DOID:3620!6.37e-08!1;DOID:3565!6.37e-08!1 | |ontology_enrichment_disease=DOID:3620!6.37e-08!1;DOID:3565!6.37e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005705!5.58e-08!1;UBERON:0008193!5.58e-08!1;UBERON:0002514!5.58e-08!1;UBERON:0003462!5.58e-08!1;UBERON:0008001!5.58e-08!1;UBERON:0007914!5.58e-08!1;UBERON:0003457!5.58e-08!1;UBERON:0009292!5.58e-08!1;UBERON:0007375!5.58e-08!1;UBERON:0003323!5.58e-08!1;UBERON:0002397!5.58e-08!1;UBERON:0001709!5.58e-08!1;UBERON:0004066!5.58e-08!1;UBERON:0002244!5.58e-08!1;UBERON:0005620!5.58e-08!1;UBERON:0004068!5.58e-08!1;UBERON:0004362!5.58e-08!1;UBERON:0003112!1.30e-07!1;UBERON:0000032!1.30e-07!1;UBERON:0005253!1.30e-07!1;UBERON:0003128!1.30e-07!1;UBERON:0002241!1.30e-07!1;UBERON:0001703!1.30e-07!1;UBERON:0004761!1.30e-07!1;UBERON:0009617!1.30e-07!1;UBERON:0002372!2.63e-07!1;UBERON:0001961!2.63e-07!1;UBERON:0001744!2.63e-07!1;UBERON:0001735!2.63e-07!1;UBERON:0002370!2.99e-07!4;UBERON:0005058!2.99e-07!4;UBERON:0009113!2.99e-07!4;UBERON:0003295!2.99e-07!4;UBERON:0005562!2.99e-07!4;UBERON:0008814!5.25e-07!15 | |ontology_enrichment_uberon=UBERON:0005705!5.58e-08!1;UBERON:0008193!5.58e-08!1;UBERON:0002514!5.58e-08!1;UBERON:0003462!5.58e-08!1;UBERON:0008001!5.58e-08!1;UBERON:0007914!5.58e-08!1;UBERON:0003457!5.58e-08!1;UBERON:0009292!5.58e-08!1;UBERON:0007375!5.58e-08!1;UBERON:0003323!5.58e-08!1;UBERON:0002397!5.58e-08!1;UBERON:0001709!5.58e-08!1;UBERON:0004066!5.58e-08!1;UBERON:0002244!5.58e-08!1;UBERON:0005620!5.58e-08!1;UBERON:0004068!5.58e-08!1;UBERON:0004362!5.58e-08!1;UBERON:0003112!1.30e-07!1;UBERON:0000032!1.30e-07!1;UBERON:0005253!1.30e-07!1;UBERON:0003128!1.30e-07!1;UBERON:0002241!1.30e-07!1;UBERON:0001703!1.30e-07!1;UBERON:0004761!1.30e-07!1;UBERON:0009617!1.30e-07!1;UBERON:0002372!2.63e-07!1;UBERON:0001961!2.63e-07!1;UBERON:0001744!2.63e-07!1;UBERON:0001735!2.63e-07!1;UBERON:0002370!2.99e-07!4;UBERON:0005058!2.99e-07!4;UBERON:0009113!2.99e-07!4;UBERON:0003295!2.99e-07!4;UBERON:0005562!2.99e-07!4;UBERON:0008814!5.25e-07!15 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.35e-18,4;UBERON:0005058,7.35e-18,4;UBERON:0009113,7.35e-18,4;UBERON:0003295,7.35e-18,4;UBERON:0005562,7.35e-18,4;UBERON:0003351,2.19e-12,6;UBERON:0004177,8.16e-11,7;UBERON:0005057,8.16e-11,7;UBERON:0000974,5.73e-08,10;UBERON:0003408,5.73e-08,10;UBERON:0001042,5.73e-08,10;UBERON:0009145,5.73e-08,10;UBERON:0006562,2.32e-07,11;UBERON:0009722,2.32e-07,11;UBERON:0007690,2.32e-07,11 | |||
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|short_description=p@chr13:49086184..49086191,- | |short_description=p@chr13:49086184..49086191,- | ||
}} | }} |
Latest revision as of 16:32, 24 July 2015
Short description: | p@chr13:49086184..49086191, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:49086184..49086191, - |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.23e-66 | 1 |
immature NK T cell | 1.23e-66 | 1 |
effector T cell | 1.23e-66 | 1 |
mature NK T cell | 1.23e-66 | 1 |
immature NK T cell stage IV | 1.23e-66 | 1 |
immature NK T cell stage I | 1.23e-66 | 1 |
immature NK T cell stage II | 1.23e-66 | 1 |
immature NK T cell stage III | 1.23e-66 | 1 |
thymocyte | 3.61e-34 | 2 |
double negative thymocyte | 3.61e-34 | 2 |
double-positive, alpha-beta thymocyte | 3.61e-34 | 2 |
DN4 thymocyte | 3.61e-34 | 2 |
DN1 thymic pro-T cell | 3.61e-34 | 2 |
DN2 thymocyte | 3.61e-34 | 2 |
DN3 thymocyte | 3.61e-34 | 2 |
immature single positive thymocyte | 3.61e-34 | 2 |
early T lineage precursor | 3.61e-34 | 2 |
neutrophil | 3.27e-23 | 3 |
immature conventional dendritic cell | 2.74e-12 | 5 |
common dendritic progenitor | 2.74e-12 | 5 |
granulocyte | 1.35e-09 | 8 |
conventional dendritic cell | 1.21e-08 | 8 |
blood cell | 2.47e-07 | 11 |
dendritic cell | 2.63e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.35e-18 | 4 |
hemolymphoid system gland | 7.35e-18 | 4 |
thymic region | 7.35e-18 | 4 |
pharyngeal gland | 7.35e-18 | 4 |
thymus primordium | 7.35e-18 | 4 |
pharyngeal epithelium | 2.19e-12 | 6 |
hemopoietic organ | 8.16e-11 | 7 |
immune organ | 8.16e-11 | 7 |
neck | 5.73e-08 | 10 |
gland of gut | 5.73e-08 | 10 |
chordate pharynx | 5.73e-08 | 10 |
pharyngeal region of foregut | 5.73e-08 | 10 |
pharynx | 2.32e-07 | 11 |
entire pharyngeal arch endoderm | 2.32e-07 | 11 |
early pharyngeal endoderm | 2.32e-07 | 11 |