FFCP PHASE1:Hg19::chr14:75747550..75747561,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:75747550..75747561,+ | |||
|coexpression_cluster_id=C269 | |coexpression_cluster_id=C269 | ||
|description=CAGE_peak_at_chr14:75747550..75747561,+ | |description=CAGE_peak_at_chr14:75747550..75747561,+ | ||
|id=chr14:75747550..75747561,+ | |id=chr14:75747550..75747561,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.85e-15!42;CL:0000860!1.22e-13!45;CL:0000738!1.69e-13!140;CL:0000766!2.89e-12!76;CL:0002031!1.72e-11!124;CL:0002087!1.16e-10!119;CL:0000557!1.22e-10!71;CL:0000839!7.52e-10!70;CL:0000037!4.37e-09!172;CL:0000566!4.37e-09!172;CL:0002009!4.84e-09!65;CL:0002194!1.59e-08!63;CL:0000576!1.59e-08!63;CL:0000040!1.59e-08!63;CL:0000559!1.59e-08!63;CL:0000988!1.83e-08!182;CL:0002393!3.09e-08!9;CL:0002397!3.09e-08!9;CL:0002032!4.18e-08!165;CL:0000837!4.18e-08!165 | |ontology_enrichment_celltype=CL:0002057!3.85e-15!42;CL:0000860!1.22e-13!45;CL:0000738!1.69e-13!140;CL:0000766!2.89e-12!76;CL:0002031!1.72e-11!124;CL:0002087!1.16e-10!119;CL:0000557!1.22e-10!71;CL:0000839!7.52e-10!70;CL:0000037!4.37e-09!172;CL:0000566!4.37e-09!172;CL:0002009!4.84e-09!65;CL:0002194!1.59e-08!63;CL:0000576!1.59e-08!63;CL:0000040!1.59e-08!63;CL:0000559!1.59e-08!63;CL:0000988!1.83e-08!182;CL:0002393!3.09e-08!9;CL:0002397!3.09e-08!9;CL:0002032!4.18e-08!165;CL:0000837!4.18e-08!165 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.02e-12;5!CL:0000226;1.04e-09;3!CL:0000842;1.04e-09;3!CL:0000767;1.86e-09;3!CL:0002541;1.86e-09;3!CL:0000623;1.86e-09;3!CL:0000766;9.23e-08;69!CL:0000163;2.89e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.01e-18,136;CL:0000037,2.40e-14,168;CL:0002031,7.27e-14,120;CL:0000988,2.13e-13,177;CL:0000097,9.44e-13,5;CL:0002028,9.44e-13,5;CL:0002032,4.21e-12,161;CL:0000837,4.21e-12,161;CL:0002087,4.21e-11,115;CL:0000766,1.47e-10,72;CL:0000226,1.26e-09,3;CL:0000842,1.26e-09,3;CL:0000557,1.27e-09,67;CL:0000767,1.44e-09,3;CL:0000623,1.50e-09,3;CL:0000825,1.50e-09,3;CL:0002541,1.57e-09,3;CL:0000839,5.15e-08,66;CL:0000763,1.36e-07,108;CL:0000049,1.36e-07,108;CL:0000134,1.73e-07,354;CL:0000163,2.77e-07,9;CL:0002320,3.03e-07,361 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.20e-08;1!UBERON:0005754;1.04e-07;1!UBERON:0003099;1.04e-07;1!UBERON:0003852;1.04e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.24e-10!80;UBERON:0001474!8.61e-10!86;UBERON:0002390!3.62e-09!102;UBERON:0003061!3.62e-09!102;UBERON:0002193!3.39e-08!112;UBERON:0004765!7.81e-08!101;UBERON:0001434!7.81e-08!101;UBERON:0002405!7.79e-07!115 | |ontology_enrichment_uberon=UBERON:0002371!3.24e-10!80;UBERON:0001474!8.61e-10!86;UBERON:0002390!3.62e-09!102;UBERON:0003061!3.62e-09!102;UBERON:0002193!3.39e-08!112;UBERON:0004765!7.81e-08!101;UBERON:0001434!7.81e-08!101;UBERON:0002405!7.79e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.86e-09;3!UBERON:0000920;1.86e-09;3!UBERON:0000998;1.04e-07;1!UBERON:0005705;1.04e-07;1!UBERON:0006868;1.04e-07;1!UBERON:0008193;1.04e-07;1!UBERON:0010912;1.04e-07;1!UBERON:0002514;1.04e-07;1!UBERON:0003457;1.04e-07;1!UBERON:0008907;1.04e-07;1!UBERON:0008001;1.04e-07;1!UBERON:0007213;1.04e-07;1!UBERON:0009891;1.04e-07;1!UBERON:0007914;1.04e-07;1!UBERON:0007375;1.04e-07;1!UBERON:0003323;1.04e-07;1!UBERON:0010258;1.04e-07;1!UBERON:0005253;1.04e-07;1!UBERON:0007842;1.04e-07;1!UBERON:0002397;1.04e-07;1!UBERON:0003113;1.04e-07;1!UBERON:0003277;1.04e-07;1!UBERON:0001709;1.04e-07;1!UBERON:0002244;1.04e-07;1!UBERON:0005620;1.04e-07;1!UBERON:0010364;1.04e-07;1!UBERON:0004288;1.04e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.57e-09,3;UBERON:0001474,5.17e-09,82;UBERON:0002390,1.29e-08,98;UBERON:0003061,1.29e-08,98;UBERON:0001434,2.32e-08,100;UBERON:0002371,2.86e-08,76;UBERON:0004765,4.99e-08,90;UBERON:0000998,1.04e-07,1;UBERON:0006868,1.04e-07,1;UBERON:0002193,1.33e-07,108;UBERON:0005705,1.75e-07,1;UBERON:0008193,1.75e-07,1;UBERON:0010912,1.75e-07,1;UBERON:0002514,1.75e-07,1;UBERON:0003457,1.75e-07,1;UBERON:0008907,1.75e-07,1;UBERON:0008001,1.75e-07,1;UBERON:0007213,1.75e-07,1;UBERON:0009891,1.75e-07,1;UBERON:0007914,1.75e-07,1;UBERON:0009292,1.75e-07,1;UBERON:0003099,1.75e-07,1;UBERON:0007375,1.75e-07,1;UBERON:0003323,1.75e-07,1;UBERON:0010258,1.75e-07,1;UBERON:0007842,1.75e-07,1;UBERON:0009494,1.75e-07,1;UBERON:0010042,1.75e-07,1;UBERON:0010045,1.75e-07,1;UBERON:0010259,1.75e-07,1;UBERON:0010359,1.75e-07,1;UBERON:0009526,1.75e-07,1;UBERON:0002397,1.75e-07,1;UBERON:0003113,1.75e-07,1;UBERON:0003277,1.75e-07,1;UBERON:0001709,1.75e-07,1;UBERON:0004066,1.75e-07,1;UBERON:0002244,1.75e-07,1;UBERON:0005620,1.75e-07,1;UBERON:0004362,1.75e-07,1;UBERON:0010364,1.75e-07,1;UBERON:0010046,1.75e-07,1;UBERON:0005868,1.75e-07,1;UBERON:0007238,1.75e-07,1;UBERON:0004288,1.75e-07,1;UBERON:0004068,1.75e-07,1;UBERON:0010334,1.75e-07,1;UBERON:0003852,1.75e-07,1;UBERON:0010253,1.75e-07,1;UBERON:0002384,6.49e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,1.23852898652861,0,0,0,0,0,0.293600439334847,0,0.401088894940283,1.51907609501096,0,0,0,0.290796477559129,0,0,0,0,0.309706370895104,0.575384784644301,0,0.47296445977717,0.689491361473237,0,2.70852973188684,0.188242339542605,0.272906150057846,0,0,0.320929027076094,0.639337125799041,0.329851300186716,0,0.852449501065388,0,0,0,1.00499466102697,0,0.868755378820466,0,0,0,0.633765858935825,1.06302149982522,0.628975936525128,1.12328631146495,1.80212271409808,0.16072558669708,0.855038231223746,0.39783335439818,0,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0.764546456250458,1.32171328579026,0,0,0.196709770113833,3.14408610199332,2.87842098599313,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0,0,0,0,0,0.80642697289893,3.7441627409691,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59785911960085,1.29707958075265,4.03975786964416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,1.2937654491571,1.41177339907723,0,0,0,0,0,0,0,0.414415513436035,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37285620900479,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,1.47775344708365,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0.111308705022906,0,0,0.398495976502139,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0.139423744278603,0.153900517007594,0,0,0.269272933229316,0,1.91400695839152,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0,0,0,2.32140586367385,0,0,0,0,0,0.35857467866569,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828478110694391,0,0.197611631897944,0,0,0,0.5013797880454,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0.554805861502613,0.568209015825267,0,0,0.457680136793847,0.756154618816195,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.491545817507439,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,1.23935764259002,0,0,0,0,1.05802783107205,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0.183428598521679,0.231051332300676,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0.115233987555779,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,1.27016115057279,0,0.31020638566432,0,0,0,0,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0.829169439458779,0.20686599172379,0.213233981900981,0,0,0,0,0.0636471582781649,0,0.435433495793923,1.02669990325584,0,0.0717222053926763,0,0,0.213454691755431,0,0.179650404213174,2.34640942403454,0,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,1.23852898652861,0,0,0,0,0,0.293600439334847,0,0.401088894940283,1.51907609501096,0,0,0,0.290796477559129,0,0,0,0,0.309706370895104,0.575384784644301,0,0.47296445977717,0.689491361473237,0,2.70852973188684,0.188242339542605,0.272906150057846,0,0,0.320929027076094,0.639337125799041,0.329851300186716,0,0.852449501065388,0,0,0,1.00499466102697,0,0.868755378820466,0,0,0,0.633765858935825,1.06302149982522,0.628975936525128,1.12328631146495,1.80212271409808,0.16072558669708,0.855038231223746,0.39783335439818,0,0,0,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0.764546456250458,1.32171328579026,0,0,0.196709770113833,3.14408610199332,2.87842098599313,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0,0,0,0,0,0.80642697289893,3.7441627409691,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59785911960085,1.29707958075265,4.03975786964416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,1.2937654491571,1.41177339907723,0,0,0,0,0,0,0,0.414415513436035,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37285620900479,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,1.47775344708365,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0.111308705022906,0,0,0.398495976502139,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0.139423744278603,0.153900517007594,0,0,0.269272933229316,0,1.91400695839152,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0,0,0,2.32140586367385,0,0,0,0,0,0.35857467866569,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828478110694391,0,0.197611631897944,0,0,0,0.5013797880454,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0.138348634936231,0,0,0,0,0,0,0,0,0.554805861502613,0.568209015825267,0,0,0.457680136793847,0.756154618816195,0,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.491545817507439,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,1.23935764259002,0,0,0,0,1.05802783107205,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0.183428598521679,0.231051332300676,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0.115233987555779,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,1.27016115057279,0,0.31020638566432,0,0,0,0,0,0,0,0.485710993059139,0,0.198950775161368,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0.829169439458779,0.20686599172379,0.213233981900981,0,0,0,0,0.0636471582781649,0,0.435433495793923,1.02669990325584,0,0.0717222053926763,0,0,0.213454691755431,0,0.179650404213174,2.34640942403454,0,0,0.665756774185513,0,0 | ||
|short_description=p@chr14:75747550..75747561,+ | |short_description=p@chr14:75747550..75747561,+ | ||
}} | }} |
Latest revision as of 22:51, 24 July 2015
Short description: | p@chr14:75747550..75747561, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:75747550..75747561, + |
Coexpression cluster: | C269_Basophils_Mast_Eosinophils_mature_CD14_chorionic_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.01e-18 | 136 |
hematopoietic stem cell | 2.40e-14 | 168 |
hematopoietic lineage restricted progenitor cell | 7.27e-14 | 120 |
hematopoietic cell | 2.13e-13 | 177 |
mast cell | 9.44e-13 | 5 |
basophil mast progenitor cell | 9.44e-13 | 5 |
hematopoietic oligopotent progenitor cell | 4.21e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.21e-12 | 161 |
nongranular leukocyte | 4.21e-11 | 115 |
myeloid leukocyte | 1.47e-10 | 72 |
single nucleate cell | 1.26e-09 | 3 |
mononuclear cell | 1.26e-09 | 3 |
granulocyte monocyte progenitor cell | 1.27e-09 | 67 |
basophil | 1.44e-09 | 3 |
natural killer cell | 1.50e-09 | 3 |
pro-NK cell | 1.50e-09 | 3 |
chorionic membrane mesenchymal stem cell | 1.57e-09 | 3 |
myeloid lineage restricted progenitor cell | 5.15e-08 | 66 |
myeloid cell | 1.36e-07 | 108 |
common myeloid progenitor | 1.36e-07 | 108 |
mesenchymal cell | 1.73e-07 | 354 |
endocrine cell | 2.77e-07 | 9 |
connective tissue cell | 3.03e-07 | 361 |