FFCP PHASE1:Hg19::chr16:28996019..28996030,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-400bp_to_CU678918_5end | |association_with_transcript=-400bp_to_CU678918_5end | ||
|cluster_id=chr16:28996019..28996030,- | |||
|coexpression_cluster_id=C3551 | |coexpression_cluster_id=C3551 | ||
|description=CAGE_peak_3_at_CU678918_5end | |description=CAGE_peak_3_at_CU678918_5end | ||
|id=chr16:28996019..28996030,- | |id=chr16:28996019..28996030,- | ||
|ontology_enrichment_celltype=CL:0000037!1.24e-28!172;CL:0000566!1.24e-28!172;CL:0000988!2.78e-26!182;CL:0002032!3.22e-26!165;CL:0000837!3.22e-26!165;CL:0000763!2.44e-25!112;CL:0000049!2.44e-25!112;CL:0000738!4.44e-21!140;CL:0000839!2.03e-20!70;CL:0000557!5.02e-20!71;CL:0002031!8.47e-20!124;CL:0000766!1.15e-19!76;CL:0002087!1.04e-16!119;CL:0002057!2.28e-14!42;CL:0002194!2.30e-14!63;CL:0000576!2.30e-14!63;CL:0000040!2.30e-14!63;CL:0000559!2.30e-14!63;CL:0002274!2.77e-14!5;CL:0000457!2.77e-14!5;CL:0002191!2.77e-14!5;CL:0000097!2.77e-14!5;CL:0000831!2.77e-14!5;CL:0002028!2.77e-14!5;CL:0002009!9.62e-14!65;CL:0000860!4.24e-13!45;CL:0000134!7.30e-08!358;CL:0000163!1.08e-07!9;CL:0002320!1.81e-07!365;CL:0000219!5.30e-07!390 | |ontology_enrichment_celltype=CL:0000037!1.24e-28!172;CL:0000566!1.24e-28!172;CL:0000988!2.78e-26!182;CL:0002032!3.22e-26!165;CL:0000837!3.22e-26!165;CL:0000763!2.44e-25!112;CL:0000049!2.44e-25!112;CL:0000738!4.44e-21!140;CL:0000839!2.03e-20!70;CL:0000557!5.02e-20!71;CL:0002031!8.47e-20!124;CL:0000766!1.15e-19!76;CL:0002087!1.04e-16!119;CL:0002057!2.28e-14!42;CL:0002194!2.30e-14!63;CL:0000576!2.30e-14!63;CL:0000040!2.30e-14!63;CL:0000559!2.30e-14!63;CL:0002274!2.77e-14!5;CL:0000457!2.77e-14!5;CL:0002191!2.77e-14!5;CL:0000097!2.77e-14!5;CL:0000831!2.77e-14!5;CL:0002028!2.77e-14!5;CL:0002009!9.62e-14!65;CL:0000860!4.24e-13!45;CL:0000134!7.30e-08!358;CL:0000163!1.08e-07!9;CL:0002320!1.81e-07!365;CL:0000219!5.30e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000097;7.09e-50;5!CL:0000163;9.46e-28;9!CL:0000763;9.79e-08;100!CL:0000766;9.46e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.32e-50,5;CL:0002028,3.32e-50,5;CL:0000163,6.24e-28,9;CL:0000763,4.90e-21,108;CL:0000049,4.90e-21,108;CL:0002032,2.88e-15,161;CL:0000837,2.88e-15,161;CL:0000037,1.58e-14,168;CL:0000988,1.15e-13,177;CL:0000839,7.49e-11,66;CL:0000557,1.13e-10,67;CL:0000766,7.33e-10,72;CL:0000151,6.64e-07,36;CL:0002031,8.96e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000049;5.37e-07;108 | |||
|ontology_enrichment_disease=DOID:8692!1.96e-13!31;DOID:1240!2.61e-13!39;DOID:2531!5.79e-12!51;DOID:0060083!5.79e-12!51 | |ontology_enrichment_disease=DOID:8692!1.96e-13!31;DOID:1240!2.61e-13!39;DOID:2531!5.79e-12!51;DOID:0060083!5.79e-12!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.91e-30;31!DOID:1240;5.72e-19;39!DOID:9119;4.44e-11;1!DOID:2531;4.99e-11;51!DOID:0060083;4.99e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.12e-30,31;DOID:1240,3.95e-29,39;DOID:2531,6.49e-22,51;DOID:0060083,6.49e-22,51;DOID:9119,4.91e-11,1;DOID:0050686,1.60e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.36e-25!102;UBERON:0003061!7.36e-25!102;UBERON:0002193!1.01e-21!112;UBERON:0002371!6.25e-17!80;UBERON:0001474!3.11e-15!86;UBERON:0002405!2.34e-13!115;UBERON:0004765!6.78e-12!101;UBERON:0001434!6.78e-12!101;UBERON:0002370!2.93e-09!4;UBERON:0005058!2.93e-09!4;UBERON:0009113!2.93e-09!4;UBERON:0003295!2.93e-09!4;UBERON:0005562!2.93e-09!4;UBERON:0002384!2.09e-07!375;UBERON:0003081!2.85e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!7.36e-25!102;UBERON:0003061!7.36e-25!102;UBERON:0002193!1.01e-21!112;UBERON:0002371!6.25e-17!80;UBERON:0001474!3.11e-15!86;UBERON:0002405!2.34e-13!115;UBERON:0004765!6.78e-12!101;UBERON:0001434!6.78e-12!101;UBERON:0002370!2.93e-09!4;UBERON:0005058!2.93e-09!4;UBERON:0009113!2.93e-09!4;UBERON:0003295!2.93e-09!4;UBERON:0005562!2.93e-09!4;UBERON:0002384!2.09e-07!375;UBERON:0003081!2.85e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.75e-09,76;UBERON:0001474,1.58e-08,82;UBERON:0004765,1.13e-07,90;UBERON:0002405,2.18e-07,93;UBERON:0002390,5.93e-07,98;UBERON:0003061,5.93e-07,98;UBERON:0001434,8.60e-07,100 | |||
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| ||
|short_description=p3@CU678918 | |short_description=p3@CU678918 | ||
}} | }} |
Latest revision as of 07:47, 25 July 2015
Short description: | p3@CU678918 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CU678918_5end |
Coexpression cluster: | C3551_acute_Mast_biphenotypic_leukemia_embryonic_small_CD14 |
Association with transcript: | -400bp_to_CU678918_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.32e-50 | 5 |
basophil mast progenitor cell | 3.32e-50 | 5 |
endocrine cell | 6.24e-28 | 9 |
myeloid cell | 4.90e-21 | 108 |
common myeloid progenitor | 4.90e-21 | 108 |
hematopoietic oligopotent progenitor cell | 2.88e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.88e-15 | 161 |
hematopoietic stem cell | 1.58e-14 | 168 |
hematopoietic cell | 1.15e-13 | 177 |
myeloid lineage restricted progenitor cell | 7.49e-11 | 66 |
granulocyte monocyte progenitor cell | 1.13e-10 | 67 |
myeloid leukocyte | 7.33e-10 | 72 |
secretory cell | 6.64e-07 | 36 |
hematopoietic lineage restricted progenitor cell | 8.96e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.75e-09 | 76 |
bone element | 1.58e-08 | 82 |
skeletal element | 1.13e-07 | 90 |
immune system | 2.18e-07 | 93 |
hematopoietic system | 5.93e-07 | 98 |
blood island | 5.93e-07 | 98 |
skeletal system | 8.60e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.12e-30 | 31 |
leukemia | 3.95e-29 | 39 |
hematologic cancer | 6.49e-22 | 51 |
immune system cancer | 6.49e-22 | 51 |
acute myeloid leukemia | 4.91e-11 | 1 |
organ system cancer | 1.60e-08 | 137 |