FFCP PHASE1:Hg19::chr16:75285224..75285236,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:75285224..75285236,- | |||
|coexpression_cluster_id=C428 | |coexpression_cluster_id=C428 | ||
|description=CAGE_peak_at_chr16:75285224..75285236,- | |description=CAGE_peak_at_chr16:75285224..75285236,- | ||
|id=chr16:75285224..75285236,- | |id=chr16:75285224..75285236,- | ||
|ontology_enrichment_celltype=CL:0000115!5.59e-17!35;CL:0002139!1.07e-13!24;CL:0000213!1.54e-12!57;CL:0000215!1.54e-12!57;CL:0002078!7.43e-12!44;CL:0000071!1.67e-09!18;CL:0002546!1.67e-09!18;CL:0000222!2.27e-09!119;CL:0000066!8.01e-09!254;CL:0000220!8.07e-07!246;CL:0002321!8.22e-07!248 | |ontology_enrichment_celltype=CL:0000115!5.59e-17!35;CL:0002139!1.07e-13!24;CL:0000213!1.54e-12!57;CL:0000215!1.54e-12!57;CL:0002078!7.43e-12!44;CL:0000071!1.67e-09!18;CL:0002546!1.67e-09!18;CL:0000222!2.27e-09!119;CL:0000066!8.01e-09!254;CL:0000220!8.07e-07!246;CL:0002321!8.22e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000115;8.52e-36;36!CL:0002139;5.38e-30;24!CL:0002078;1.85e-22;45!CL:0000071;8.14e-18;18!CL:0002188;1.91e-17;5!CL:0000213;4.92e-17;58!CL:0000215;4.92e-17;58!CL:0002138;4.65e-15;6!CL:1000746;1.67e-12;7!CL:1000612;1.67e-12;7!CL:0002262;5.62e-12;2!CL:1000398;5.62e-12;2!CL:1000449;9.94e-09;15!CL:0002543;1.95e-08;6!CL:0002144;2.80e-08;3!CL:0002586;6.02e-08;3!CL:0002618;6.02e-08;3!CL:1000497;1.14e-07;17!CL:0002518;1.14e-07;17!CL:0002681;2.50e-07;12!CL:0002584;2.50e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.23e-44,36;CL:0002078,6.69e-35,45;CL:0002139,3.85e-30,24;CL:0000213,3.12e-29,58;CL:0000215,3.12e-29,58;CL:0000071,5.46e-18,18;CL:0002546,5.46e-18,18;CL:0002188,3.14e-17,5;CL:0000222,1.40e-16,121;CL:0005020,5.52e-15,6;CL:0002138,5.52e-15,6;CL:0005022,5.52e-15,6;CL:1000746,2.37e-12,7;CL:1000612,2.37e-12,7;CL:0002262,3.97e-12,2;CL:1000398,3.97e-12,2;CL:1000449,1.05e-08,15;CL:0002543,1.28e-08,6;CL:0002144,2.97e-08,3;CL:0002618,3.31e-08,3;CL:0002586,5.64e-08,3;CL:0002321,7.28e-08,250;CL:0000066,7.74e-08,253;CL:1000497,1.19e-07,17;CL:0002518,1.19e-07,17;CL:0002681,3.05e-07,12;CL:0002584,3.05e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;8.14e-18;18!CL:0005022;4.65e-15;6!CL:0000222;3.30e-08;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;6.02e-08;3!DOID:127;6.02e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.48e-08,3;DOID:127,2.48e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002049!7.03e-16!79;UBERON:0007798!7.03e-16!79;UBERON:0000477!9.27e-14!286;UBERON:0000055!1.99e-13!69;UBERON:0000119!2.03e-13!312;UBERON:0000483!3.41e-13!309;UBERON:0004111!6.50e-13!241;UBERON:0003914!1.32e-11!118;UBERON:0001981!2.09e-11!60;UBERON:0007500!2.09e-11!60;UBERON:0004537!2.09e-11!60;UBERON:0006965!2.09e-11!60;UBERON:0000468!2.17e-11!659;UBERON:0000025!1.38e-10!194;UBERON:0004535!1.21e-09!110;UBERON:0001009!1.41e-09!113;UBERON:0004872!1.41e-09!84;UBERON:0001986!1.67e-09!18;UBERON:0004638!1.67e-09!18;UBERON:0004852!1.67e-09!18;UBERON:0000481!2.44e-09!347;UBERON:0000467!1.82e-08!625;UBERON:0000480!2.35e-08!626;UBERON:0000475!3.92e-08!365;UBERON:0000922!2.12e-07!612;UBERON:0000487!9.75e-07!22 | |ontology_enrichment_uberon=UBERON:0002049!7.03e-16!79;UBERON:0007798!7.03e-16!79;UBERON:0000477!9.27e-14!286;UBERON:0000055!1.99e-13!69;UBERON:0000119!2.03e-13!312;UBERON:0000483!3.41e-13!309;UBERON:0004111!6.50e-13!241;UBERON:0003914!1.32e-11!118;UBERON:0001981!2.09e-11!60;UBERON:0007500!2.09e-11!60;UBERON:0004537!2.09e-11!60;UBERON:0006965!2.09e-11!60;UBERON:0000468!2.17e-11!659;UBERON:0000025!1.38e-10!194;UBERON:0004535!1.21e-09!110;UBERON:0001009!1.41e-09!113;UBERON:0004872!1.41e-09!84;UBERON:0001986!1.67e-09!18;UBERON:0004638!1.67e-09!18;UBERON:0004852!1.67e-09!18;UBERON:0000481!2.44e-09!347;UBERON:0000467!1.82e-08!625;UBERON:0000480!2.35e-08!626;UBERON:0000475!3.92e-08!365;UBERON:0000922!2.12e-07!612;UBERON:0000487!9.75e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.14e-18;18!UBERON:0001986;8.14e-18;18!UBERON:0004852;8.14e-18;18!UBERON:0000487;2.35e-14;22!UBERON:0000074;1.67e-12;7!UBERON:0001229;1.67e-12;7!UBERON:0006914;1.74e-12;25!UBERON:0000353;1.86e-12;15!UBERON:0001281;5.62e-12;2!UBERON:0003497;5.62e-12;2!UBERON:0003909;5.62e-12;2!UBERON:0003835;5.62e-12;2!UBERON:0001473;2.55e-11;8!UBERON:0004536;2.55e-11;8!UBERON:0006558;2.55e-11;8!UBERON:0002465;4.54e-09;10!UBERON:0000490;7.85e-09;33!UBERON:0006555;9.94e-09;15!UBERON:0004819;9.94e-09;15!UBERON:0001285;9.94e-09;15!UBERON:0007684;9.94e-09;15!UBERON:0003914;1.61e-08;74!UBERON:0000055;1.71e-08;65!UBERON:0010523;2.80e-08;3!UBERON:0001915;2.80e-08;3!UBERON:0001982;2.80e-08;3!UBERON:0001280;2.90e-08;3!UBERON:0004647;2.90e-08;3!UBERON:0001781;6.02e-08;3!UBERON:0001782;6.02e-08;3!UBERON:0007500;9.25e-08;56!UBERON:0001981;9.25e-08;56!UBERON:0004537;9.25e-08;56!UBERON:0003513;1.73e-07;7!UBERON:0001225;2.50e-07;12!UBERON:0008987;2.50e-07;12!UBERON:0002049;4.67e-07;75!UBERON:0007798;4.67e-07;75 | |||
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| ||
|short_description=p@chr16:75285224..75285236,- | |short_description=p@chr16:75285224..75285236,- | ||
}} | }} |
Latest revision as of 12:23, 25 July 2015
Short description: | p@chr16:75285224..75285236, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:75285224..75285236, - |
Coexpression cluster: | C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.23e-44 | 36 |
meso-epithelial cell | 6.69e-35 | 45 |
endothelial cell of vascular tree | 3.85e-30 | 24 |
lining cell | 3.12e-29 | 58 |
barrier cell | 3.12e-29 | 58 |
blood vessel endothelial cell | 5.46e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.46e-18 | 18 |
glomerular endothelial cell | 3.14e-17 | 5 |
mesodermal cell | 1.40e-16 | 121 |
lymphangioblast | 5.52e-15 | 6 |
endothelial cell of lymphatic vessel | 5.52e-15 | 6 |
vascular lymphangioblast | 5.52e-15 | 6 |
glomerular cell | 2.37e-12 | 7 |
kidney corpuscule cell | 2.37e-12 | 7 |
endothelial cell of sinusoid | 3.97e-12 | 2 |
endothelial cell of hepatic sinusoid | 3.97e-12 | 2 |
epithelial cell of nephron | 1.05e-08 | 15 |
vein endothelial cell | 1.28e-08 | 6 |
capillary endothelial cell | 2.97e-08 | 3 |
endothelial cell of umbilical vein | 3.31e-08 | 3 |
retinal pigment epithelial cell | 5.64e-08 | 3 |
embryonic cell | 7.28e-08 | 250 |
epithelial cell | 7.74e-08 | 253 |
kidney cell | 1.19e-07 | 17 |
kidney epithelial cell | 1.19e-07 | 17 |
kidney cortical cell | 3.05e-07 | 12 |
renal cortical epithelial cell | 3.05e-07 | 12 |
Ontology term | p-value | n |
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