FFCP PHASE1:Hg19::chr17:53499150..53499161,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23531 | |EntrezGene=23531 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7153 | |HGNC=7153 | ||
|TSSclassifier=strong | |||
|UniProt=Q15546 | |UniProt=Q15546 | ||
|association_with_transcript=179bp_to_ENST00000262065,NM_012329,uc002iui.2_5end | |association_with_transcript=179bp_to_ENST00000262065,NM_012329,uc002iui.2_5end | ||
|cluster_id=chr17:53499150..53499161,- | |||
|coexpression_cluster_id=C29 | |coexpression_cluster_id=C29 | ||
|description=CAGE_peak_4_at_MMD_5end | |description=CAGE_peak_4_at_MMD_5end | ||
|id=chr17:53499150..53499161,- | |id=chr17:53499150..53499161,- | ||
|ontology_enrichment_celltype=CL:0000136!1.97e-09!15 | |ontology_enrichment_celltype=CL:0000136!1.97e-09!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.83e-31;13!CL:0002602;5.22e-11;2!CL:0002521;6.54e-08;3!CL:0000594;6.54e-08;3!CL:0002615;1.27e-07;3!CL:0000680;3.67e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.57e-27,15;CL:0002602,4.49e-11,2;CL:0000594,4.70e-08,3;CL:0002521,7.65e-08,3;CL:0002615,7.65e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.84e-07;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!1.01e-11!138;UBERON:0003929!2.37e-10!54;UBERON:0005256!1.11e-09!143;UBERON:0000119!5.53e-08!312;UBERON:0005911!1.01e-07!82;UBERON:0000483!1.22e-07!309;UBERON:0002100!2.95e-07!216;UBERON:0000475!3.06e-07!365;UBERON:0007499!4.27e-07!25;UBERON:0000481!7.90e-07!347 | |ontology_enrichment_uberon=UBERON:0000490!1.01e-11!138;UBERON:0003929!2.37e-10!54;UBERON:0005256!1.11e-09!143;UBERON:0000119!5.53e-08!312;UBERON:0005911!1.01e-07!82;UBERON:0000483!1.22e-07!309;UBERON:0002100!2.95e-07!216;UBERON:0000475!3.06e-07!365;UBERON:0007499!4.27e-07!25;UBERON:0000481!7.90e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0006444;5.22e-11;2!UBERON:0001995;5.22e-11;2!UBERON:0004715;5.22e-11;2!UBERON:0011135;9.00e-10;5!UBERON:0002216;9.00e-10;5!UBERON:0011134;9.00e-10;5!UBERON:0002209;9.00e-10;5!UBERON:0002213;9.00e-10;5!UBERON:0007844;9.00e-10;5!UBERON:0011138;9.00e-10;5!UBERON:0001130;9.00e-10;5!UBERON:0001066;9.00e-10;5!UBERON:0001468;9.00e-10;5!UBERON:0002107;4.71e-09;19!UBERON:0006925;4.71e-09;19!UBERON:0002190;6.54e-08;3!UBERON:0002418;1.27e-07;3!UBERON:0004755;1.27e-07;3!UBERON:0002423;9.60e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006444,4.49e-11,2;UBERON:0001995,4.49e-11,2;UBERON:0004715,4.49e-11,2;UBERON:0011135,8.10e-10,5;UBERON:0002216,8.10e-10,5;UBERON:0011134,8.10e-10,5;UBERON:0002209,8.10e-10,5;UBERON:0002213,8.10e-10,5;UBERON:0005856,8.10e-10,5;UBERON:0005866,8.10e-10,5;UBERON:0005863,8.10e-10,5;UBERON:0007844,8.10e-10,5;UBERON:0011138,8.10e-10,5;UBERON:0001130,8.10e-10,5;UBERON:0001066,8.10e-10,5;UBERON:0001468,8.10e-10,5;UBERON:0002107,5.52e-09,19;UBERON:0006925,5.52e-09,19;UBERON:0008836,5.52e-09,19;UBERON:0003104,2.61e-08,160;UBERON:0009142,2.61e-08,160;UBERON:0002190,7.65e-08,3;UBERON:0008835,1.11e-07,22;UBERON:0003894,1.11e-07,22;UBERON:0002418,1.15e-07,3;UBERON:0004755,1.15e-07,3;UBERON:0009854,2.52e-07,23;UBERON:0005256,2.92e-07,122 | |||
|phase1_expression=0.726713517082227,1.07050261945492,1.83240725324762,0,1.78784437770915,0,5.06599756336621,1.26343974685366,0.783556884599516,0.491467873003018,0,0,0,1.48519623552056,1.32558950291166,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0,0,0.671746422719773,0.32389366601898,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.37770945674,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.709336764396714,0,0,0,0.311211035399766,0.269421344139376,0.326923806226917,0.908144565869588,0.576175924479999,0,0,0.570471821544449,0.597794722207204,0,0,0,0.61246251376468,0.122834317311768,0.723280468230358,0,0,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0.10366105501537,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,0,0,0.982827216677626,0,0,0.983907508344908,1.3725424823882,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0.266422179016099,1.14382394926518,0,0,0.65147236858747,0.355391948742546,0,12.9618932135622,18.3022026306062,12.3966509065751,0,0,0,0,0,0,0.289562613335158,1.64381058040307,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,2.57652132610194,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,2.53804844142407,0.200506470303285,0,0.114814448164607,0.364182336013434,0.393373244878272,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.924291702687866,1.22802939780904,0.137836572484531,5.37101224341368,1.88521702088497,0.767039646744908,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,1.71175595213568,0,0,0.539617372749944,1.37268514868027,0.353437207037059,0,0,0,0.48763373908959,0,0,0.818999468447914,0.848432591722276,1.13008116620243,0,0,0,2.89387767133344,0.655894752046633,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0.507447609232169,0.764637207142375,0,0,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66270448179735,0,0,0.284136146806413,0,0,0,0.994147647766298,0.140669416410513,0.222617410045812,0,0,0,0,0,0.102268682502155,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0.421996129056054,2.28525931422807,1.13082457147153,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0.160317640503067,0.213452994739353,3.19695375331408,0,0,0,0,0,0,0,0,0.407992870545287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3393140992228,1.31865373409866,1.48287796479207,0,0,0,0,0,0,0,0.449947783103001,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0.170388021785422,1.92630555584214,0.146552233678082,1.32506888912221,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,15.7765162977147,16.5455330054982,16.8490067219904,12.1312873362628,0,0,0,0,0,0.110929051536852,0.0620964029413835,0.415045904808692,0.124980407962107,0,0,0,0,0,0.298509605773748,0,0,0,0,2.66943366478961,0,0,0,0.295710299979268,0.159296767163702,0,0.465788870628778,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.389720617678777,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0.431299245586727,0,0.218419276384028,0,0,0,0,0,0,0,0,0.3062454773532,0.192687675289379,0,0,0.41023272848151,0,0,0.161475645631851,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0.147856086217045,0.202612753855184,0,0,0.19024743058172,0.546974809018219,0,0,0,0.127762427639595,0,0.336283722218824,0,0.227662191351298,0.177404740325278,0,0.342976018874837,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0.0802413666891683,0,0,0.143339583151451,0.631086248772738,0,0,0,0,0,0,0,0.218531143927391,0,0,0,0,0,0,0.535928260312357,0,0,0,0,0,0.0620747142958579,0,0,0.404234377916439,0,0,0.0673520530145875,0.0717222053926763,0,0.162806537221949,0,0,0,0,0,0.406896178315738,0,1.00636896795513,0 | |phase1_expression=0.726713517082227,1.07050261945492,1.83240725324762,0,1.78784437770915,0,5.06599756336621,1.26343974685366,0.783556884599516,0.491467873003018,0,0,0,1.48519623552056,1.32558950291166,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0,0,0.671746422719773,0.32389366601898,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.37770945674,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.709336764396714,0,0,0,0.311211035399766,0.269421344139376,0.326923806226917,0.908144565869588,0.576175924479999,0,0,0.570471821544449,0.597794722207204,0,0,0,0.61246251376468,0.122834317311768,0.723280468230358,0,0,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0.10366105501537,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,0,0,0.982827216677626,0,0,0.983907508344908,1.3725424823882,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0.266422179016099,1.14382394926518,0,0,0.65147236858747,0.355391948742546,0,12.9618932135622,18.3022026306062,12.3966509065751,0,0,0,0,0,0,0.289562613335158,1.64381058040307,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,2.57652132610194,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,2.53804844142407,0.200506470303285,0,0.114814448164607,0.364182336013434,0.393373244878272,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.924291702687866,1.22802939780904,0.137836572484531,5.37101224341368,1.88521702088497,0.767039646744908,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,1.71175595213568,0,0,0.539617372749944,1.37268514868027,0.353437207037059,0,0,0,0.48763373908959,0,0,0.818999468447914,0.848432591722276,1.13008116620243,0,0,0,2.89387767133344,0.655894752046633,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0.507447609232169,0.764637207142375,0,0,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66270448179735,0,0,0.284136146806413,0,0,0,0.994147647766298,0.140669416410513,0.222617410045812,0,0,0,0,0,0.102268682502155,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0.421996129056054,2.28525931422807,1.13082457147153,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0.160317640503067,0.213452994739353,3.19695375331408,0,0,0,0,0,0,0,0,0.407992870545287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3393140992228,1.31865373409866,1.48287796479207,0,0,0,0,0,0,0,0.449947783103001,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0.170388021785422,1.92630555584214,0.146552233678082,1.32506888912221,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,15.7765162977147,16.5455330054982,16.8490067219904,12.1312873362628,0,0,0,0,0,0.110929051536852,0.0620964029413835,0.415045904808692,0.124980407962107,0,0,0,0,0,0.298509605773748,0,0,0,0,2.66943366478961,0,0,0,0.295710299979268,0.159296767163702,0,0.465788870628778,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.389720617678777,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0.431299245586727,0,0.218419276384028,0,0,0,0,0,0,0,0,0.3062454773532,0.192687675289379,0,0,0.41023272848151,0,0,0.161475645631851,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0.147856086217045,0.202612753855184,0,0,0.19024743058172,0.546974809018219,0,0,0,0.127762427639595,0,0.336283722218824,0,0.227662191351298,0.177404740325278,0,0.342976018874837,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0.0802413666891683,0,0,0.143339583151451,0.631086248772738,0,0,0,0,0,0,0,0.218531143927391,0,0,0,0,0,0,0.535928260312357,0,0,0,0,0,0.0620747142958579,0,0,0.404234377916439,0,0,0.0673520530145875,0.0717222053926763,0,0.162806537221949,0,0,0,0,0,0.406896178315738,0,1.00636896795513,0 | ||
|short_description=p4@MMD | |short_description=p4@MMD | ||
}} | }} |
Latest revision as of 07:06, 16 September 2015
Short description: | p4@MMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MMD_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 179bp_to_ENST00000262065, NM_012329, uc002iui.2_5end |
EntrezGene: | MMD |
HGNC: | 7153 |
UniProt: | Q15546 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.57e-27 | 15 |
annulus pulposus cell | 4.49e-11 | 2 |
skeletal muscle satellite cell | 4.70e-08 | 3 |
subcutaneous fat cell | 7.65e-08 | 3 |
adipocyte of omentum tissue | 7.65e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
annulus fibrosus | 4.49e-11 | 2 |
fibrocartilage | 4.49e-11 | 2 |
annulus fibrosus disci intervertebralis | 4.49e-11 | 2 |
intervertebral cartilage | 8.10e-10 | 5 |
symphysis | 8.10e-10 | 5 |
nonsynovial joint | 8.10e-10 | 5 |
fibrous joint | 8.10e-10 | 5 |
cartilaginous joint | 8.10e-10 | 5 |
developing mesenchymal condensation | 8.10e-10 | 5 |
pre-cartilage condensation | 8.10e-10 | 5 |
cartilaginous condensation | 8.10e-10 | 5 |
cartilage element | 8.10e-10 | 5 |
post-cranial axial skeletal system | 8.10e-10 | 5 |
vertebral column | 8.10e-10 | 5 |
intervertebral disk | 8.10e-10 | 5 |
intervertebral joint | 8.10e-10 | 5 |
liver | 5.52e-09 | 19 |
digestive gland | 5.52e-09 | 19 |
liver bud | 5.52e-09 | 19 |
mesenchyme | 2.61e-08 | 160 |
entire embryonic mesenchyme | 2.61e-08 | 160 |
subcutaneous adipose tissue | 7.65e-08 | 3 |
hepatic diverticulum | 1.11e-07 | 22 |
liver primordium | 1.11e-07 | 22 |
cartilage tissue | 1.15e-07 | 3 |
skeletal tissue | 1.15e-07 | 3 |
digestive tract diverticulum | 2.52e-07 | 23 |
trunk mesenchyme | 2.92e-07 | 122 |