FFCP PHASE1:Hg19::chr19:2393146..2393152,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:2393146..2393152,+ | |||
|coexpression_cluster_id=C19 | |coexpression_cluster_id=C19 | ||
|description=CAGE_peak_at_chr19:2393146..2393152,+ | |description=CAGE_peak_at_chr19:2393146..2393152,+ | ||
|id=chr19:2393146..2393152,+ | |id=chr19:2393146..2393152,+ | ||
|ontology_enrichment_celltype=CL:0002032!1.95e-07!165;CL:0000837!1.95e-07!165;CL:0000037!2.69e-07!172;CL:0000566!2.69e-07!172;CL:0000988!7.79e-07!182 | |ontology_enrichment_celltype=CL:0002032!1.95e-07!165;CL:0000837!1.95e-07!165;CL:0000037!2.69e-07!172;CL:0000566!2.69e-07!172;CL:0000988!7.79e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0002127;2.79e-11;1!CL:0000911;2.79e-11;1!CL:0000814;2.79e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.79e-11,1;CL:0000914,2.79e-11,1;CL:0000911,2.79e-11,1;CL:0000814,2.79e-11,1;CL:0002042,2.79e-11,1;CL:0002039,2.79e-11,1;CL:0002040,2.79e-11,1;CL:0002041,2.79e-11,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.01e-26!51;DOID:0060083!2.01e-26!51;DOID:162!4.99e-26!235;DOID:14566!5.17e-25!239;DOID:0050686!1.61e-16!137;DOID:1240!2.06e-16!39;DOID:0060058!1.36e-12!10;DOID:8692!1.32e-09!31;DOID:0050687!2.56e-08!143 | |ontology_enrichment_disease=DOID:2531!2.01e-26!51;DOID:0060083!2.01e-26!51;DOID:162!4.99e-26!235;DOID:14566!5.17e-25!239;DOID:0050686!1.61e-16!137;DOID:1240!2.06e-16!39;DOID:0060058!1.36e-12!10;DOID:8692!1.32e-09!31;DOID:0050687!2.56e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:1240;7.29e-15;39!DOID:8692;2.30e-14;31!DOID:6193;3.76e-11;1!DOID:2531;1.03e-09;51!DOID:0060083;1.03e-09;51!DOID:3908;1.69e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.47e-18,39;DOID:8692,2.92e-14,31;DOID:2531,6.53e-14,51;DOID:0060083,6.53e-14,51;DOID:6193,3.41e-11,1;DOID:3908,1.66e-08,5 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236132343941038,0,0,0,0,0,0,0.697204805222715,0.426507697462265,0,0,0,0,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.882926198829301,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.28553435957927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0.144269212976445,0.284567373393656,0.318852545457645,0,0,0.846694330895531,0.324621940274555,0,2.05411211129873,0,0,0,0.1605880751037,0.201799707191048,0.425846237690326,2.06103206853459,2.15068535015921,2.01308497103174,0.834245708559542,0.19538809540204,0,0,0,0.66614393599564,0,0.18714054040822,0,0,3.12041475976939,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0.211125408127993,0,0,0,0,0.369254416383208,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,2.03402920234213,0,0,0,0,0.885741385813839,0,0,0,0,0,0.10893846351899,0.278847488557207,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,1.1279783030859,0,0,0,1.58936578980379,0,0,0.141353071433941,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,0.729819156862664,0,0,0,0,0,0,14.4310482637913,0.311064574191741,0,0,0,0,0,0,0,0.195984794828755,0,0,3.95567874684718,0.19351266257817,0.584714536689484,0.328461828212837,0,0,0,0.274083849293502,0.596143835108969,0,0,0,0,0,0.288180834308212,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0.525774708558629,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0.551482276150566,0.741742725430498,0.741438982396034,0.0984274815147488,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,1.47840471127169,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,4.94029079744861,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.151649117541648,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0.97894681802587,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0.106691729694141,0.172214979660816,0,0,0,0,0.127894371303652,0,0.314531883711793,0.436838552768056,0,0,0,0,0,1.1829261750188,0,0.352675943690684,0,0,1.41696576325585,0.159633859057151,0,0,0.138314504928436,0,0,0.0981477185010256,0.825788063434183,0,0,0,0,1.19349733269765,0,1.41193548092464,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0.703484977438482,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0.556157009460346,0,0,0.280272163313789,0,0,0,0,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0.994753875806841,0,0.11294608203896,0,0,0,0,0.940634592723046,0,0,0.196308467114945,0.297046400327086,0,0,0,0.386747327841463,0.799529247399431,0.357107877211315,0.352894871715692,0,0,0,0.430018749454354,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0.18378979906969,0,2.42491834298366,3.21556956187414,0,0,0,0,0,0.372448285775147,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236132343941038,0,0,0,0,0,0,0.697204805222715,0.426507697462265,0,0,0,0,0.223915474239924,0.32389366601898,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.882926198829301,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.28553435957927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0.144269212976445,0.284567373393656,0.318852545457645,0,0,0.846694330895531,0.324621940274555,0,2.05411211129873,0,0,0,0.1605880751037,0.201799707191048,0.425846237690326,2.06103206853459,2.15068535015921,2.01308497103174,0.834245708559542,0.19538809540204,0,0,0,0.66614393599564,0,0.18714054040822,0,0,3.12041475976939,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0.211125408127993,0,0,0,0,0.369254416383208,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,2.03402920234213,0,0,0,0,0.885741385813839,0,0,0,0,0,0.10893846351899,0.278847488557207,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,1.1279783030859,0,0,0,1.58936578980379,0,0,0.141353071433941,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,0.729819156862664,0,0,0,0,0,0,14.4310482637913,0.311064574191741,0,0,0,0,0,0,0,0.195984794828755,0,0,3.95567874684718,0.19351266257817,0.584714536689484,0.328461828212837,0,0,0,0.274083849293502,0.596143835108969,0,0,0,0,0,0.288180834308212,0.114536596165916,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0.525774708558629,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0.551482276150566,0.741742725430498,0.741438982396034,0.0984274815147488,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,1.47840471127169,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,4.94029079744861,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.151649117541648,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0.97894681802587,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0.132864840313363,0,0,0,0,0.19998739585493,0.106691729694141,0.172214979660816,0,0,0,0,0.127894371303652,0,0.314531883711793,0.436838552768056,0,0,0,0,0,1.1829261750188,0,0.352675943690684,0,0,1.41696576325585,0.159633859057151,0,0,0.138314504928436,0,0,0.0981477185010256,0.825788063434183,0,0,0,0,1.19349733269765,0,1.41193548092464,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0.703484977438482,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0.556157009460346,0,0,0.280272163313789,0,0,0,0,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0.994753875806841,0,0.11294608203896,0,0,0,0,0.940634592723046,0,0,0.196308467114945,0.297046400327086,0,0,0,0.386747327841463,0.799529247399431,0.357107877211315,0.352894871715692,0,0,0,0.430018749454354,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0.18378979906969,0,2.42491834298366,3.21556956187414,0,0,0,0,0,0.372448285775147,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr19:2393146..2393152,+ | |short_description=p@chr19:2393146..2393152,+ | ||
}} | }} |
Latest revision as of 05:51, 26 July 2015
Short description: | p@chr19:2393146..2393152, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:2393146..2393152, + |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.79e-11 | 1 |
immature NK T cell | 2.79e-11 | 1 |
effector T cell | 2.79e-11 | 1 |
mature NK T cell | 2.79e-11 | 1 |
immature NK T cell stage IV | 2.79e-11 | 1 |
immature NK T cell stage I | 2.79e-11 | 1 |
immature NK T cell stage II | 2.79e-11 | 1 |
immature NK T cell stage III | 2.79e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.47e-18 | 39 |
myeloid leukemia | 2.92e-14 | 31 |
hematologic cancer | 6.53e-14 | 51 |
immune system cancer | 6.53e-14 | 51 |
epithelioid sarcoma | 3.41e-11 | 1 |
non-small cell lung carcinoma | 1.66e-08 | 5 |