FFCP PHASE1:Hg19::chr1:161207964..161207975,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9970 | |EntrezGene=9970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7969 | |HGNC=7969 | ||
|TSSclassifier=strong | |||
|UniProt=C0H5Y2 | |UniProt=C0H5Y2 | ||
|association_with_transcript=-11bp_to_ENST00000367982,ENST00000506018_5end | |association_with_transcript=-11bp_to_ENST00000367982,ENST00000506018_5end | ||
|cluster_id=chr1:161207964..161207975,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_3_at_NR1I3_5end | |description=CAGE_peak_3_at_NR1I3_5end | ||
|id=chr1:161207964..161207975,- | |id=chr1:161207964..161207975,- | ||
|ontology_enrichment_celltype=CL:0000181!1.13e-07!12;CL:0000417!1.13e-07!12;CL:0000668!1.13e-07!12;CL:0000414!1.13e-07!12;CL:0000412!1.13e-07!12;CL:0000182!1.13e-07!12 | |ontology_enrichment_celltype=CL:0000181!1.13e-07!12;CL:0000417!1.13e-07!12;CL:0000668!1.13e-07!12;CL:0000414!1.13e-07!12;CL:0000412!1.13e-07!12;CL:0000182!1.13e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.75e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.75e-14,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:114!3.70e-11!2 | |ontology_enrichment_disease=DOID:114!3.70e-11!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.35e-10!19;UBERON:0006925!3.35e-10!19;UBERON:0008836!3.35e-10!19;UBERON:0008835!6.84e-09!22;UBERON:0003894!6.84e-09!22;UBERON:0009854!1.57e-08!23;UBERON:0007499!6.81e-08!25;UBERON:0009497!6.81e-08!25;UBERON:0000015!6.81e-08!25;UBERON:0002423!6.81e-08!25;UBERON:0006235!6.81e-08!25;UBERON:0004161!6.81e-08!25;UBERON:0005057!1.30e-07!26;UBERON:0009856!1.30e-07!26;UBERON:0000160!6.32e-07!27 | |ontology_enrichment_uberon=UBERON:0002107!3.35e-10!19;UBERON:0006925!3.35e-10!19;UBERON:0008836!3.35e-10!19;UBERON:0008835!6.84e-09!22;UBERON:0003894!6.84e-09!22;UBERON:0009854!1.57e-08!23;UBERON:0007499!6.81e-08!25;UBERON:0009497!6.81e-08!25;UBERON:0000015!6.81e-08!25;UBERON:0002423!6.81e-08!25;UBERON:0006235!6.81e-08!25;UBERON:0004161!6.81e-08!25;UBERON:0005057!1.30e-07!26;UBERON:0009856!1.30e-07!26;UBERON:0000160!6.32e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.31e-19;19!UBERON:0006925;1.31e-19;19!UBERON:0002423;3.99e-15;25!UBERON:0002365;9.49e-13;31!UBERON:0002330;9.49e-13;31!UBERON:0002368;8.72e-10;33!UBERON:0000949;1.70e-08;43!UBERON:0005172;6.32e-07;52!UBERON:0005173;6.32e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.31e-19,19;UBERON:0006925,1.31e-19,19;UBERON:0008836,1.31e-19,19;UBERON:0008835,4.60e-17,22;UBERON:0003894,4.60e-17,22;UBERON:0009854,2.31e-16,23;UBERON:0007499,3.99e-15,25;UBERON:0009497,3.99e-15,25;UBERON:0000015,3.99e-15,25;UBERON:0002423,3.99e-15,25;UBERON:0006235,3.99e-15,25;UBERON:0004161,3.99e-15,25;UBERON:0009856,1.41e-14,26;UBERON:0002365,2.30e-12,31;UBERON:0002330,2.30e-12,31;UBERON:0002368,4.78e-11,35;UBERON:0000949,9.12e-09,45;UBERON:0003929,1.99e-07,54;UBERON:0005172,1.99e-07,54;UBERON:0005173,1.99e-07,54;UBERON:0002530,7.38e-07,59;UBERON:0002417,9.34e-07,60;UBERON:0000916,9.34e-07,60 | |||
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|short_description=p3@NR1I3 | |short_description=p3@NR1I3 | ||
}} | }} |
Latest revision as of 05:40, 18 September 2015
Short description: | p3@NR1I3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NR1I3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -11bp_to_ENST00000367982, ENST00000506018_5end |
EntrezGene: | NR1I3 |
HGNC: | 7969 |
UniProt: | C0H5Y2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.75e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.31e-19 | 19 |
digestive gland | 1.31e-19 | 19 |
liver bud | 1.31e-19 | 19 |
hepatic diverticulum | 4.60e-17 | 22 |
liver primordium | 4.60e-17 | 22 |
digestive tract diverticulum | 2.31e-16 | 23 |
epithelial sac | 3.99e-15 | 25 |
epithelium of foregut-midgut junction | 3.99e-15 | 25 |
anatomical boundary | 3.99e-15 | 25 |
hepatobiliary system | 3.99e-15 | 25 |
foregut-midgut junction | 3.99e-15 | 25 |
septum transversum | 3.99e-15 | 25 |
sac | 1.41e-14 | 26 |
exocrine gland | 2.30e-12 | 31 |
exocrine system | 2.30e-12 | 31 |
endocrine gland | 4.78e-11 | 35 |
endocrine system | 9.12e-09 | 45 |
gut epithelium | 1.99e-07 | 54 |
abdomen element | 1.99e-07 | 54 |
abdominal segment element | 1.99e-07 | 54 |
gland | 7.38e-07 | 59 |
abdominal segment of trunk | 9.34e-07 | 60 |
abdomen | 9.34e-07 | 60 |