FFCP PHASE1:Hg19::chr1:31230650..31230683,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7805 | |EntrezGene=7805 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29612 | |HGNC=29612 | ||
|TSSclassifier=strong | |||
|UniProt=Q13571,Q5TBB8 | |UniProt=Q13571,Q5TBB8 | ||
|association_with_transcript=0bp_to_ENST00000294507,NM_006762,uc001bsc.2_5end | |association_with_transcript=0bp_to_ENST00000294507,NM_006762,uc001bsc.2_5end | ||
|cluster_id=chr1:31230650..31230683,- | |||
|coexpression_cluster_id=C3967 | |coexpression_cluster_id=C3967 | ||
|description=CAGE_peak_2_at_LAPTM5_5end | |description=CAGE_peak_2_at_LAPTM5_5end | ||
|id=chr1:31230650..31230683,- | |id=chr1:31230650..31230683,- | ||
|ontology_enrichment_celltype=CL:0000037!1.57e-73!172;CL:0000566!1.57e-73!172;CL:0002032!8.20e-70!165;CL:0000837!8.20e-70!165;CL:0000988!6.88e-69!182;CL:0000738!3.16e-63!140;CL:0002031!4.60e-53!124;CL:0002087!7.48e-51!119;CL:0000763!3.34e-46!112;CL:0000049!3.34e-46!112;CL:0000766!1.29e-36!76;CL:0000557!4.37e-32!71;CL:0000839!3.29e-31!70;CL:0002009!5.87e-29!65;CL:0002194!4.03e-28!63;CL:0000576!4.03e-28!63;CL:0000040!4.03e-28!63;CL:0000559!4.03e-28!63;CL:0002057!7.46e-25!42;CL:0000860!3.25e-21!45;CL:0000542!1.17e-19!53;CL:0000051!1.17e-19!53;CL:0000838!2.20e-19!52;CL:0000134!1.33e-14!358;CL:0002320!3.19e-13!365;CL:0000945!2.09e-11!24;CL:0000826!2.09e-11!24;CL:0000219!3.01e-09!390;CL:0000084!2.88e-08!25;CL:0000827!2.88e-08!25;CL:0000236!6.53e-08!14;CL:0000791!7.71e-08!18;CL:0000789!7.71e-08!18;CL:0002420!7.71e-08!18;CL:0002419!7.71e-08!18;CL:0000790!7.71e-08!18 | |ontology_enrichment_celltype=CL:0000037!1.57e-73!172;CL:0000566!1.57e-73!172;CL:0002032!8.20e-70!165;CL:0000837!8.20e-70!165;CL:0000988!6.88e-69!182;CL:0000738!3.16e-63!140;CL:0002031!4.60e-53!124;CL:0002087!7.48e-51!119;CL:0000763!3.34e-46!112;CL:0000049!3.34e-46!112;CL:0000766!1.29e-36!76;CL:0000557!4.37e-32!71;CL:0000839!3.29e-31!70;CL:0002009!5.87e-29!65;CL:0002194!4.03e-28!63;CL:0000576!4.03e-28!63;CL:0000040!4.03e-28!63;CL:0000559!4.03e-28!63;CL:0002057!7.46e-25!42;CL:0000860!3.25e-21!45;CL:0000542!1.17e-19!53;CL:0000051!1.17e-19!53;CL:0000838!2.20e-19!52;CL:0000134!1.33e-14!358;CL:0002320!3.19e-13!365;CL:0000945!2.09e-11!24;CL:0000826!2.09e-11!24;CL:0000219!3.01e-09!390;CL:0000084!2.88e-08!25;CL:0000827!2.88e-08!25;CL:0000236!6.53e-08!14;CL:0000791!7.71e-08!18;CL:0000789!7.71e-08!18;CL:0002420!7.71e-08!18;CL:0002419!7.71e-08!18;CL:0000790!7.71e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.29e-20;39!CL:0000234;1.29e-20;39!CL:0000860;2.30e-20;33!CL:0002057;2.30e-20;33!CL:0000576;1.16e-18;48!CL:0000766;5.94e-18;69!CL:0002087;1.34e-15;104!CL:0000763;2.33e-15;100!CL:0000738;4.02e-15;136!CL:0000988;4.75e-13;177!CL:0000542;3.28e-12;53!CL:0000945;5.19e-12;24!CL:0000084;1.57e-08;25!CL:0000791;3.18e-08;18!CL:0000789;3.18e-08;18!CL:0002419;3.18e-08;18!CL:0000236;7.11e-08;13!CL:0000094;4.99e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.14e-81,168;CL:0002032,1.04e-77,161;CL:0000837,1.04e-77,161;CL:0000988,3.18e-76,177;CL:0000738,6.16e-71,136;CL:0002031,5.01e-60,120;CL:0002087,1.10e-57,115;CL:0000763,7.40e-53,108;CL:0000049,7.40e-53,108;CL:0000766,3.25e-43,72;CL:0000557,3.25e-38,67;CL:0000839,3.03e-37,66;CL:0002009,7.28e-35,61;CL:0002194,5.49e-34,59;CL:0000576,5.49e-34,59;CL:0000040,5.49e-34,59;CL:0000559,5.49e-34,59;CL:0000473,1.89e-30,48;CL:0000234,1.89e-30,48;CL:0000860,2.93e-26,42;CL:0002057,2.93e-26,42;CL:0000542,1.38e-20,53;CL:0000051,1.38e-20,53;CL:0000838,2.71e-20,52;CL:0000134,3.24e-13,354;CL:0000945,5.34e-12,24;CL:0000826,5.34e-12,24;CL:0002320,1.31e-11,361;CL:0000084,1.58e-08,25;CL:0000827,1.58e-08,25;CL:0000236,2.70e-08,14;CL:0000791,3.22e-08,18;CL:0000789,3.22e-08,18;CL:0002420,3.22e-08,18;CL:0002419,3.22e-08,18;CL:0000790,3.22e-08,18;CL:0000219,5.40e-08,386;CL:0000094,5.01e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.16e-19;42!CL:0000049;1.59e-14;108!CL:0000051;3.28e-12;53!CL:0000790;3.18e-08;18 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.07e-09;31!DOID:1240;1.49e-08;39!DOID:2531;5.72e-08;51!DOID:0060083;5.72e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.45e-13,51;DOID:0060083,6.45e-13,51;DOID:1240,6.64e-11,39;DOID:8692,4.96e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0002193!6.16e-38!112;UBERON:0002390!1.44e-37!102;UBERON:0003061!1.44e-37!102;UBERON:0002371!2.38e-27!80;UBERON:0002405!3.10e-25!115;UBERON:0001474!3.24e-23!86;UBERON:0004765!1.35e-18!101;UBERON:0001434!1.35e-18!101;UBERON:0007023!2.03e-15!115;UBERON:0003081!2.31e-12!216;UBERON:0002384!4.10e-12!375;UBERON:0000178!1.82e-08!15;UBERON:0000179!1.82e-08!15;UBERON:0000463!1.82e-08!15 | |ontology_enrichment_uberon=UBERON:0002193!6.16e-38!112;UBERON:0002390!1.44e-37!102;UBERON:0003061!1.44e-37!102;UBERON:0002371!2.38e-27!80;UBERON:0002405!3.10e-25!115;UBERON:0001474!3.24e-23!86;UBERON:0004765!1.35e-18!101;UBERON:0001434!1.35e-18!101;UBERON:0007023!2.03e-15!115;UBERON:0003081!2.31e-12!216;UBERON:0002384!4.10e-12!375;UBERON:0000178!1.82e-08!15;UBERON:0000179!1.82e-08!15;UBERON:0000463!1.82e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.90e-09;15!UBERON:0000179;6.90e-09;15!UBERON:0000463;6.90e-09;15 | |||
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| ||
|short_description=p2@LAPTM5 | |short_description=p2@LAPTM5 | ||
}} | }} |
Latest revision as of 12:30, 17 September 2015
Short description: | p2@LAPTM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LAPTM5_5end |
Coexpression cluster: | C3967_Neutrophils_CD19_Eosinophils_Macrophage_CD14_Monocytederived_Basophils |
Association with transcript: | 0bp_to_ENST00000294507, NM_006762, uc001bsc.2_5end |
EntrezGene: | LAPTM5 |
HGNC: | 29612 |
UniProt: | Q13571Q5TBB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.51e-44 | 108 |
hematopoietic system | 1.24e-43 | 98 |
blood island | 1.24e-43 | 98 |
immune system | 1.20e-35 | 93 |
bone marrow | 1.29e-32 | 76 |
bone element | 1.47e-27 | 82 |
skeletal element | 2.27e-22 | 90 |
skeletal system | 2.08e-19 | 100 |
adult organism | 3.16e-16 | 114 |
lateral plate mesoderm | 4.82e-15 | 203 |
connective tissue | 9.79e-11 | 371 |
blood | 6.97e-09 | 15 |
haemolymphatic fluid | 6.97e-09 | 15 |
organism substance | 6.97e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.45e-13 | 51 |
immune system cancer | 6.45e-13 | 51 |
leukemia | 6.64e-11 | 39 |
myeloid leukemia | 4.96e-10 | 31 |