FFCP PHASE1:Hg19::chr19:14721826..14721829,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:14721826..14721829,+
|short_description=p@chr19:14721826..14721829,+
|description=CAGE_peak_at_chr19:14721826..14721829,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:14721826..14721829,+ | |||
|coexpression_cluster_id=C342 | |||
|description=CAGE_peak_at_chr19:14721826..14721829,+ | |||
|id=chr19:14721826..14721829,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.76e-41!24;CL:0000826!1.76e-41!24;CL:0002087!1.98e-30!119;CL:0000738!2.99e-24!140;CL:0002031!1.93e-22!124;CL:0000236!2.46e-20!14;CL:0000542!6.79e-20!53;CL:0000051!6.79e-20!53;CL:0000988!1.64e-19!182;CL:0000838!3.31e-18!52;CL:0000037!9.22e-18!172;CL:0000566!9.22e-18!172;CL:0000080!1.16e-15!6;CL:0002032!1.26e-15!165;CL:0000837!1.26e-15!165;CL:0002057!3.68e-15!42;CL:0000860!7.31e-14!45;CL:0000842!1.31e-08!3;CL:0002194!1.58e-08!63;CL:0000576!1.58e-08!63;CL:0000040!1.58e-08!63;CL:0000559!1.58e-08!63;CL:0002009!3.77e-08!65;CL:0000839!2.64e-07!70;CL:0000557!3.76e-07!71;CL:0000785!6.37e-07!2;CL:0000955!6.37e-07!2;CL:0000818!6.37e-07!2;CL:0000954!6.37e-07!2;CL:0000816!6.37e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.84e-83;24!CL:0000236;7.43e-39;13!CL:0000542;2.05e-25;53!CL:0002087;3.33e-10;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.21e-83,24;CL:0000826,3.21e-83,24;CL:0000542,2.30e-42,53;CL:0000051,2.30e-42,53;CL:0000838,1.96e-37,52;CL:0000236,2.99e-36,14;CL:0002087,6.88e-21,115;CL:0000738,2.43e-17,136;CL:0002031,2.64e-17,120;CL:0002032,2.61e-14,161;CL:0000837,2.61e-14,161;CL:0000037,1.27e-13,168;CL:0000988,8.17e-13,177 | |||
|ontology_enrichment_development_v019=CL:0000051;2.05e-25;53 | |||
|ontology_enrichment_disease=DOID:0060058!4.92e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:630;2.93e-12;1!DOID:0050177;2.93e-12;1!DOID:0050427;2.93e-12;1!DOID:12603;3.64e-12;1!DOID:2355;1.07e-11;1!DOID:0060058;4.81e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.93e-12,1;DOID:0050177,2.93e-12,1;DOID:0050427,2.93e-12,1;DOID:12603,3.65e-12,1;DOID:2355,1.81e-11,1;DOID:0060058,5.97e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!6.63e-17!15;UBERON:0000179!6.63e-17!15;UBERON:0000463!6.63e-17!15;UBERON:0002390!1.18e-16!102;UBERON:0003061!1.18e-16!102;UBERON:0002193!1.03e-15!112;UBERON:0002106!2.26e-09!3;UBERON:0004854!2.26e-09!3;UBERON:0009034!2.26e-09!3;UBERON:0002095!2.26e-09!3;UBERON:0004782!2.26e-09!3;UBERON:0003281!2.26e-09!3;UBERON:0009664!2.26e-09!3;UBERON:0002296!2.26e-09!3;UBERON:0005602!2.26e-09!3;UBERON:0001179!2.26e-09!3;UBERON:0006293!2.26e-09!3;UBERON:0007023!2.21e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr19:14721826..14721829,+ | |||
}} | }} |
Latest revision as of 04:26, 26 July 2015
Short description: | p@chr19:14721826..14721829, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:14721826..14721829, + |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.21e-83 | 24 |
pro-B cell | 3.21e-83 | 24 |
lymphocyte | 2.30e-42 | 53 |
common lymphoid progenitor | 2.30e-42 | 53 |
lymphoid lineage restricted progenitor cell | 1.96e-37 | 52 |
B cell | 2.99e-36 | 14 |
nongranular leukocyte | 6.88e-21 | 115 |
leukocyte | 2.43e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 2.64e-17 | 120 |
hematopoietic oligopotent progenitor cell | 2.61e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.61e-14 | 161 |
hematopoietic stem cell | 1.27e-13 | 168 |
hematopoietic cell | 8.17e-13 | 177 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.93e-12 | 1 |
monogenic disease | 2.93e-12 | 1 |
xeroderma pigmentosum | 2.93e-12 | 1 |
acute leukemia | 3.65e-12 | 1 |
anemia | 1.81e-11 | 1 |
lymphoma | 5.97e-10 | 10 |