FFCP PHASE1:Hg19::chr22:44569031..44569036,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64098 | |EntrezGene=64098 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14654 | |HGNC=14654 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HBI0 | |UniProt=Q9HBI0 | ||
|association_with_transcript=195bp_to_ENST00000422871,NM_001137605,NR_024427,uc011aqe.1_5end | |association_with_transcript=195bp_to_ENST00000422871,NM_001137605,NR_024427,uc011aqe.1_5end | ||
|cluster_id=chr22:44569031..44569036,+ | |||
|coexpression_cluster_id=C298 | |coexpression_cluster_id=C298 | ||
|description=CAGE_peak_27_at_PARVG_5end | |description=CAGE_peak_27_at_PARVG_5end | ||
|id=chr22:44569031..44569036,+ | |id=chr22:44569031..44569036,+ | ||
|ontology_enrichment_celltype=CL:0002619!6.26e-16!3;CL:0000763!1.99e-12!112;CL:0000049!1.99e-12!112;CL:0000766!2.48e-08!76;CL:0002032!6.64e-08!165;CL:0000837!6.64e-08!165;CL:0002194!6.88e-08!63;CL:0000576!6.88e-08!63;CL:0000040!6.88e-08!63;CL:0000559!6.88e-08!63;CL:0002009!1.25e-07!65;CL:0000037!1.64e-07!172;CL:0000566!1.64e-07!172;CL:0000839!4.82e-07!70;CL:0000988!5.27e-07!182;CL:0000557!6.17e-07!71 | |ontology_enrichment_celltype=CL:0002619!6.26e-16!3;CL:0000763!1.99e-12!112;CL:0000049!1.99e-12!112;CL:0000766!2.48e-08!76;CL:0002032!6.64e-08!165;CL:0000837!6.64e-08!165;CL:0002194!6.88e-08!63;CL:0000576!6.88e-08!63;CL:0000040!6.88e-08!63;CL:0000559!6.88e-08!63;CL:0002009!1.25e-07!65;CL:0000037!1.64e-07!172;CL:0000566!1.64e-07!172;CL:0000839!4.82e-07!70;CL:0000988!5.27e-07!182;CL:0000557!6.17e-07!71 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:225!1.40e-12!1;DOID:8692!1.61e-12!31;DOID:1240!7.11e-10!39;DOID:2531!1.87e-07!51;DOID:0060083!1.87e-07!51;DOID:74!6.42e-07!2 | |ontology_enrichment_disease=DOID:225!1.40e-12!1;DOID:8692!1.61e-12!31;DOID:1240!7.11e-10!39;DOID:2531!1.87e-07!51;DOID:0060083!1.87e-07!51;DOID:74!6.42e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:4362;1.48e-40;5!DOID:120;8.32e-09;27!DOID:193;2.67e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.48e-40,5;DOID:120,8.32e-09,27;DOID:193,2.67e-08,29 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000002;4.27e-34;6!UBERON:0001560;4.27e-34;6!UBERON:0000995;4.22e-13;17!UBERON:0003975;1.85e-12;18!UBERON:0004175;6.74e-11;21!UBERON:0000474;4.53e-08;37!UBERON:0003133;2.32e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000002,4.27e-34,6;UBERON:0001560,4.27e-34,6;UBERON:0000995,6.74e-11,21;UBERON:0005795,1.80e-10,22;UBERON:0003975,1.80e-10,22;UBERON:0004175,2.15e-09,25;UBERON:0003134,8.21e-07,37;UBERON:0000474,8.21e-07,37 | |||
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|short_description=p27@PARVG | |short_description=p27@PARVG | ||
}} | }} |
Latest revision as of 02:26, 25 September 2015
Short description: | p27@PARVG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_PARVG_5end |
Coexpression cluster: | C298_small_optic_substantia_thalamus_diencephalon_globus_occipital |
Association with transcript: | 195bp_to_ENST00000422871, NM_001137605, NR_024427, uc011aqe.1_5end |
EntrezGene: | PARVG |
HGNC: | 14654 |
UniProt: | Q9HBI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterine cervix | 4.27e-34 | 6 |
neck of organ | 4.27e-34 | 6 |
uterus | 6.74e-11 | 21 |
embryonic uterus | 1.80e-10 | 22 |
internal female genitalia | 1.80e-10 | 22 |
internal genitalia | 2.15e-09 | 25 |
female reproductive organ | 8.21e-07 | 37 |
female reproductive system | 8.21e-07 | 37 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.48e-40 | 5 |
female reproductive organ cancer | 8.32e-09 | 27 |
reproductive organ cancer | 2.67e-08 | 29 |