FFCP PHASE1:Hg19::chr2:201994552..201994568,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8837 | |EntrezGene=8837 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1876 | |HGNC=1876 | ||
|TSSclassifier=strong | |||
|UniProt=O15519 | |UniProt=O15519 | ||
|association_with_transcript=-20bp_to_ENST00000457277_5end | |association_with_transcript=-20bp_to_ENST00000457277_5end | ||
|cluster_id=chr2:201994552..201994568,+ | |||
|coexpression_cluster_id=C1888 | |coexpression_cluster_id=C1888 | ||
|description=CAGE_peak_12_at_CFLAR_5end | |description=CAGE_peak_12_at_CFLAR_5end | ||
|id=chr2:201994552..201994568,+ | |id=chr2:201994552..201994568,+ | ||
|ontology_enrichment_celltype=CL:0000359!6.41e-16!32;CL:0000222!3.96e-15!119;CL:0000192!4.47e-15!42;CL:0000514!4.47e-15!42;CL:0000144!2.03e-13!625;CL:0002371!4.49e-11!591;CL:0000048!5.20e-11!430;CL:0000187!1.69e-10!54;CL:0000680!1.95e-10!57;CL:0000056!1.95e-10!57;CL:0000355!1.95e-10!57;CL:0000723!3.30e-10!436;CL:0000183!3.98e-10!59;CL:0000034!3.85e-09!444;CL:0000393!2.86e-08!60;CL:0000211!2.86e-08!60;CL:0000077!1.56e-07!19;CL:0000548!1.99e-07!679;CL:0000004!1.99e-07!679;CL:0000255!1.99e-07!679;CL:0000012!5.17e-07!682;CL:0002539!8.73e-07!10 | |ontology_enrichment_celltype=CL:0000359!6.41e-16!32;CL:0000222!3.96e-15!119;CL:0000192!4.47e-15!42;CL:0000514!4.47e-15!42;CL:0000144!2.03e-13!625;CL:0002371!4.49e-11!591;CL:0000048!5.20e-11!430;CL:0000187!1.69e-10!54;CL:0000680!1.95e-10!57;CL:0000056!1.95e-10!57;CL:0000355!1.95e-10!57;CL:0000723!3.30e-10!436;CL:0000183!3.98e-10!59;CL:0000034!3.85e-09!444;CL:0000393!2.86e-08!60;CL:0000211!2.86e-08!60;CL:0000077!1.56e-07!19;CL:0000548!1.99e-07!679;CL:0000004!1.99e-07!679;CL:0000255!1.99e-07!679;CL:0000012!5.17e-07!682;CL:0002539!8.73e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.34e-20;32!CL:0000192;1.55e-10;43!CL:0000453;8.23e-09;5!CL:0002539;2.62e-08;10!CL:0000077;2.64e-08;19!CL:0000990;1.62e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.07e-21,32;CL:0000192,8.23e-14,43;CL:0000514,8.23e-14,43;CL:0000222,5.31e-12,121;CL:0000187,5.71e-10,55;CL:0000680,4.54e-09,58;CL:0000056,4.54e-09,58;CL:0000355,4.54e-09,58;CL:0000048,5.92e-09,427;CL:0000453,8.37e-09,5;CL:0000077,1.73e-08,19;CL:0000723,1.80e-08,433;CL:0000393,2.88e-08,61;CL:0000211,2.88e-08,61;CL:0002539,3.23e-08,10;CL:0000034,7.41e-08,441;CL:0000990,2.20e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000514;1.55e-10;43 | |||
|ontology_enrichment_disease=DOID:2394!1.35e-08!14 | |ontology_enrichment_disease=DOID:2394!1.35e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.10e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.76e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0001009!2.47e-19!113;UBERON:0004535!6.87e-19!110;UBERON:0001637!6.64e-18!42;UBERON:0003509!6.64e-18!42;UBERON:0004572!6.64e-18!42;UBERON:0002049!6.88e-18!79;UBERON:0007798!6.88e-18!79;UBERON:0004872!7.43e-18!84;UBERON:0000055!1.86e-17!69;UBERON:0003081!2.52e-16!216;UBERON:0001981!2.52e-16!60;UBERON:0007500!2.52e-16!60;UBERON:0004537!2.52e-16!60;UBERON:0006965!2.52e-16!60;UBERON:0004573!5.30e-15!33;UBERON:0004571!5.30e-15!33;UBERON:0003914!1.49e-12!118;UBERON:0000947!2.30e-09!21;UBERON:0010191!2.30e-09!21;UBERON:0001134!1.10e-08!61;UBERON:0002036!1.10e-08!61;UBERON:0003082!1.10e-08!61;UBERON:0002385!3.02e-08!63;UBERON:0001015!3.02e-08!63;UBERON:0000383!3.02e-08!63;UBERON:0004290!2.89e-07!70;UBERON:0004237!8.73e-07!10;UBERON:0004695!8.73e-07!10;UBERON:0002111!8.73e-07!10;UBERON:0004178!8.73e-07!10 | |ontology_enrichment_uberon=UBERON:0001009!2.47e-19!113;UBERON:0004535!6.87e-19!110;UBERON:0001637!6.64e-18!42;UBERON:0003509!6.64e-18!42;UBERON:0004572!6.64e-18!42;UBERON:0002049!6.88e-18!79;UBERON:0007798!6.88e-18!79;UBERON:0004872!7.43e-18!84;UBERON:0000055!1.86e-17!69;UBERON:0003081!2.52e-16!216;UBERON:0001981!2.52e-16!60;UBERON:0007500!2.52e-16!60;UBERON:0004537!2.52e-16!60;UBERON:0006965!2.52e-16!60;UBERON:0004573!5.30e-15!33;UBERON:0004571!5.30e-15!33;UBERON:0003914!1.49e-12!118;UBERON:0000947!2.30e-09!21;UBERON:0010191!2.30e-09!21;UBERON:0001134!1.10e-08!61;UBERON:0002036!1.10e-08!61;UBERON:0003082!1.10e-08!61;UBERON:0002385!3.02e-08!63;UBERON:0001015!3.02e-08!63;UBERON:0000383!3.02e-08!63;UBERON:0004290!2.89e-07!70;UBERON:0004237!8.73e-07!10;UBERON:0004695!8.73e-07!10;UBERON:0002111!8.73e-07!10;UBERON:0004178!8.73e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.50e-14;33!UBERON:0004571;6.50e-14;33!UBERON:0001637;9.65e-14;42!UBERON:0003509;9.65e-14;42!UBERON:0004572;9.65e-14;42!UBERON:0007500;1.13e-08;56!UBERON:0001981;1.13e-08;56!UBERON:0004537;1.13e-08;56!UBERON:0004237;2.62e-08;10!UBERON:0004695;2.62e-08;10!UBERON:0002111;2.62e-08;10!UBERON:0004178;2.62e-08;10!UBERON:0000947;2.87e-08;21!UBERON:0010191;2.87e-08;21!UBERON:0000055;1.46e-07;65!UBERON:0002118;1.86e-07;5!UBERON:0000992;2.72e-07;13!UBERON:0002049;8.87e-07;75!UBERON:0007798;8.87e-07;75 | |||
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| ||
|short_description=p12@CFLAR | |short_description=p12@CFLAR | ||
}} | }} |
Latest revision as of 12:31, 19 September 2015
Short description: | p12@CFLAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CFLAR_5end |
Coexpression cluster: | C1888_hairy_migratory_immature_cord_mycosis_xeroderma_splenic |
Association with transcript: | -20bp_to_ENST00000457277_5end |
EntrezGene: | CFLAR |
HGNC: | 1876 |
UniProt: | O15519 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.07e-21 | 32 |
smooth muscle cell | 8.23e-14 | 43 |
smooth muscle myoblast | 8.23e-14 | 43 |
mesodermal cell | 5.31e-12 | 121 |
muscle cell | 5.71e-10 | 55 |
muscle precursor cell | 4.54e-09 | 58 |
myoblast | 4.54e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.54e-09 | 58 |
multi fate stem cell | 5.92e-09 | 427 |
Langerhans cell | 8.37e-09 | 5 |
mesothelial cell | 1.73e-08 | 19 |
somatic stem cell | 1.80e-08 | 433 |
electrically responsive cell | 2.88e-08 | 61 |
electrically active cell | 2.88e-08 | 61 |
aortic smooth muscle cell | 3.23e-08 | 10 |
stem cell | 7.41e-08 | 441 |
conventional dendritic cell | 2.20e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.76e-15 | 14 |