FFCP PHASE1:Hg19::chr3:110690162..110690174,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-392bp_to_AK098733_5end | |association_with_transcript=-392bp_to_AK098733_5end | ||
|cluster_id=chr3:110690162..110690174,- | |||
|coexpression_cluster_id=C4261 | |coexpression_cluster_id=C4261 | ||
|description=CAGE_peak_3_at_AK098733_5end | |description=CAGE_peak_3_at_AK098733_5end | ||
|id=chr3:110690162..110690174,- | |id=chr3:110690162..110690174,- | ||
|ontology_enrichment_celltype=CL:0002150!2.12e-09!3;CL:0000861!2.12e-09!3;CL:0002379!1.04e-07!1 | |ontology_enrichment_celltype=CL:0002150!2.12e-09!3;CL:0000861!2.12e-09!3;CL:0002379!1.04e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002097;1.89e-10;2!CL:0000174;2.19e-07;3!CL:0002178;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,2.07e-10,2;CL:0000174,2.32e-07,3;CL:0002178,2.97e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.22e-16!235;DOID:14566!3.45e-16!239;DOID:0050687!1.25e-09!143;DOID:6193!4.35e-08!1;DOID:0060085!5.70e-08!1;DOID:3165!5.70e-08!1;DOID:0060121!5.70e-08!1;DOID:2438!5.70e-08!1;DOID:4418!5.70e-08!1;DOID:1115!5.74e-08!20;DOID:1036!6.05e-08!8;DOID:4960!7.45e-08!1;DOID:0070004!7.45e-08!1;DOID:3620!1.04e-07!1;DOID:3565!1.04e-07!1 | |ontology_enrichment_disease=DOID:162!1.22e-16!235;DOID:14566!3.45e-16!239;DOID:0050687!1.25e-09!143;DOID:6193!4.35e-08!1;DOID:0060085!5.70e-08!1;DOID:3165!5.70e-08!1;DOID:0060121!5.70e-08!1;DOID:2438!5.70e-08!1;DOID:4418!5.70e-08!1;DOID:1115!5.74e-08!20;DOID:1036!6.05e-08!8;DOID:4960!7.45e-08!1;DOID:0070004!7.45e-08!1;DOID:3620!1.04e-07!1;DOID:3565!1.04e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:6193;3.56e-19;1!DOID:3350;2.85e-10;2!DOID:1115;1.13e-08;20!DOID:4556;1.82e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,3.25e-19,1;DOID:3350,2.72e-10,2;DOID:1115,1.20e-08,20;DOID:162,1.45e-08,235;DOID:14566,2.27e-08,239;DOID:0050687,1.45e-07,143;DOID:4556,1.82e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001282!3.10e-08!1;UBERON:0009842!3.10e-08!1;UBERON:0003704!3.10e-08!1;UBERON:0001171!3.10e-08!1;UBERON:0001172!3.10e-08!1 | |ontology_enrichment_uberon=UBERON:0001282!3.10e-08!1;UBERON:0009842!3.10e-08!1;UBERON:0003704!3.10e-08!1;UBERON:0001171!3.10e-08!1;UBERON:0001172!3.10e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.56e-19;1!UBERON:0009842;1.56e-19;1!UBERON:0003704;1.56e-19;1!UBERON:0001171;1.56e-19;1!UBERON:0001172;1.56e-19;1!UBERON:0002369;2.19e-07;3!UBERON:0001235;2.19e-07;3!UBERON:0006858;2.19e-07;3!UBERON:0001280;2.19e-07;3!UBERON:0004647;2.19e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.30e-19,1;UBERON:0009842,1.30e-19,1;UBERON:0003704,1.30e-19,1;UBERON:0001171,1.30e-19,1;UBERON:0001172,1.30e-19,1;UBERON:0001280,2.05e-07,3;UBERON:0004647,2.05e-07,3;UBERON:0005171,2.05e-07,3;UBERON:0002369,2.32e-07,3;UBERON:0001235,2.32e-07,3;UBERON:0006858,2.32e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43410110628385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544692317594951,0,0,2.84855139617503,0,0.0897576444097721,0,0,0,0,0,0.470940769185074,0,0,0,0,0,0.476809736941136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94144542218394,0,0,0,0,1.54787429224455,0.290268993867255,0.146178634172371,0,0,0,0,0,0.794858446811959,0,0,0.240476460754601,0,1.19885765749278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,8.1312259119943,0,0,0,0,0,0,0,0,0,1.97022049798414,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11881813448034,0,0,0.680117776536817,0.231522474323834,3.42631386309055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516644938982447,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,1.0085253435176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04617282831313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43410110628385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544692317594951,0,0,2.84855139617503,0,0.0897576444097721,0,0,0,0,0,0.470940769185074,0,0,0,0,0,0.476809736941136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94144542218394,0,0,0,0,1.54787429224455,0.290268993867255,0.146178634172371,0,0,0,0,0,0.794858446811959,0,0,0.240476460754601,0,1.19885765749278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,8.1312259119943,0,0,0,0,0,0,0,0,0,1.97022049798414,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11881813448034,0,0,0.680117776536817,0.231522474323834,3.42631386309055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516644938982447,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,1.0085253435176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04617282831313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@AK098733 | |short_description=p3@AK098733 | ||
}} | }} |
Latest revision as of 14:08, 29 July 2015
Short description: | p3@AK098733 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AK098733_5end |
Coexpression cluster: | C4261_large_myeloma_mesothelioma_cholangiocellular_endometrial_epithelioid_leukemia |
Association with transcript: | -392bp_to_AK098733_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 2.07e-10 | 2 |
steroid hormone secreting cell | 2.32e-07 | 3 |
epithelial cell of stomach | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.30e-19 | 1 |
acinus | 1.30e-19 | 1 |
intrahepatic bile duct | 1.30e-19 | 1 |
portal lobule | 1.30e-19 | 1 |
hepatic acinus | 1.30e-19 | 1 |
liver parenchyma | 2.05e-07 | 3 |
liver lobule | 2.05e-07 | 3 |
hepatic duct | 2.05e-07 | 3 |
adrenal gland | 2.32e-07 | 3 |
adrenal cortex | 2.32e-07 | 3 |
adrenal/interrenal gland | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 3.25e-19 | 1 |
mesenchymal cell neoplasm | 2.72e-10 | 2 |
sarcoma | 1.20e-08 | 20 |
cancer | 1.45e-08 | 235 |
disease of cellular proliferation | 2.27e-08 | 239 |
cell type cancer | 1.45e-07 | 143 |
lung large cell carcinoma | 1.82e-07 | 3 |