FFCP PHASE1:Hg19::chr3:158537329..158537341,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64747 | |EntrezGene=64747 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25874 | |HGNC=25874 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000465624_5end | |association_with_transcript=0bp_to_ENST00000465624_5end | ||
|cluster_id=chr3:158537329..158537341,+ | |||
|coexpression_cluster_id=C67 | |coexpression_cluster_id=C67 | ||
|description=CAGE_peak_5_at_MFSD1_5end | |description=CAGE_peak_5_at_MFSD1_5end | ||
|id=chr3:158537329..158537341,+ | |id=chr3:158537329..158537341,+ | ||
|ontology_enrichment_celltype=CL:0002194!2.69e-43!63;CL:0000576!2.69e-43!63;CL:0000040!2.69e-43!63;CL:0000559!2.69e-43!63;CL:0002009!1.71e-41!65;CL:0000766!2.08e-40!76;CL:0002057!8.58e-39!42;CL:0000839!1.95e-37!70;CL:0000557!1.08e-36!71;CL:0000860!2.20e-35!45;CL:0000763!2.41e-23!112;CL:0000049!2.41e-23!112;CL:0002087!9.22e-22!119;CL:0000738!6.39e-20!140;CL:0002031!2.67e-19!124;CL:0002032!1.82e-14!165;CL:0000837!1.82e-14!165;CL:0000037!6.43e-14!172;CL:0000566!6.43e-14!172;CL:0000988!2.69e-12!182 | |ontology_enrichment_celltype=CL:0002194!2.69e-43!63;CL:0000576!2.69e-43!63;CL:0000040!2.69e-43!63;CL:0000559!2.69e-43!63;CL:0002009!1.71e-41!65;CL:0000766!2.08e-40!76;CL:0002057!8.58e-39!42;CL:0000839!1.95e-37!70;CL:0000557!1.08e-36!71;CL:0000860!2.20e-35!45;CL:0000763!2.41e-23!112;CL:0000049!2.41e-23!112;CL:0002087!9.22e-22!119;CL:0000738!6.39e-20!140;CL:0002031!2.67e-19!124;CL:0002032!1.82e-14!165;CL:0000837!1.82e-14!165;CL:0000037!6.43e-14!172;CL:0000566!6.43e-14!172;CL:0000988!2.69e-12!182 | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.20e-34;6!CL:0000473;2.50e-26;39!CL:0000234;2.50e-26;39!CL:0002619;1.05e-18;3!CL:0000576;1.26e-13;48!CL:0000860;2.73e-13;33!CL:0002057;2.73e-13;33!CL:0000766;5.87e-12;69!CL:0000763;1.54e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,8.76e-37,59;CL:0000576,8.76e-37,59;CL:0000040,8.76e-37,59;CL:0000559,8.76e-37,59;CL:0002009,1.89e-35,61;CL:0000235,1.57e-34,6;CL:0000839,1.82e-32,66;CL:0000557,6.39e-32,67;CL:0000473,6.18e-30,48;CL:0000234,6.18e-30,48;CL:0000766,2.01e-29,72;CL:0002619,1.08e-18,3;CL:0000763,3.34e-18,108;CL:0000049,3.34e-18,108;CL:0002087,7.87e-17,115;CL:0002031,6.00e-16,120;CL:0000860,1.11e-13,42;CL:0002057,1.11e-13,42;CL:0000738,1.47e-13,136;CL:0002032,8.92e-11,161;CL:0000837,8.92e-11,161;CL:0000037,3.80e-10,168;CL:0000988,2.07e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.75e-10;42!UBERON:0006241;1.82e-08;3!UBERON:0003057;1.82e-08;3!UBERON:0004872;1.38e-07;7!UBERON:0003124;8.47e-07;1!UBERON:0010226;8.47e-07;1!UBERON:0010115;8.47e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.26e-33!115;UBERON:0002371!2.72e-32!80;UBERON:0001474!5.69e-29!86;UBERON:0002390!8.53e-29!102;UBERON:0003061!8.53e-29!102;UBERON:0002405!2.28e-27!115;UBERON:0002193!2.79e-27!112;UBERON:0004765!1.58e-23!101;UBERON:0001434!1.58e-23!101;UBERON:0000062!1.04e-13!511;UBERON:0001049!5.71e-12!57;UBERON:0005068!5.71e-12!57;UBERON:0006241!5.71e-12!57;UBERON:0007135!5.71e-12!57;UBERON:0003081!6.36e-12!216;UBERON:0002204!1.40e-10!167;UBERON:0001017!8.24e-10!82;UBERON:0002780!8.43e-10!41;UBERON:0001890!8.43e-10!41;UBERON:0006240!8.43e-10!41;UBERON:0005743!9.59e-10!86;UBERON:0003080!1.92e-09!42;UBERON:0002616!4.30e-09!59;UBERON:0003075!1.94e-08!86;UBERON:0007284!1.94e-08!86;UBERON:0000467!2.54e-08!625;UBERON:0000480!2.93e-08!626;UBERON:0000955!3.60e-08!69;UBERON:0006238!3.60e-08!69;UBERON:0000073!4.81e-08!94;UBERON:0001016!4.81e-08!94;UBERON:0001893!8.80e-08!34;UBERON:0002346!1.02e-07!90;UBERON:0001869!2.25e-07!32;UBERON:0000468!2.75e-07!659;UBERON:0000923!2.83e-07!604;UBERON:0005291!2.83e-07!604;UBERON:0006598!2.83e-07!604;UBERON:0002532!2.83e-07!604;UBERON:0000922!3.04e-07!612;UBERON:0002050!3.24e-07!605;UBERON:0005423!3.24e-07!605;UBERON:0002791!3.39e-07!33;UBERON:0002020!8.14e-07!34;UBERON:0003528!8.14e-07!34 | |ontology_enrichment_uberon=UBERON:0007023!2.26e-33!115;UBERON:0002371!2.72e-32!80;UBERON:0001474!5.69e-29!86;UBERON:0002390!8.53e-29!102;UBERON:0003061!8.53e-29!102;UBERON:0002405!2.28e-27!115;UBERON:0002193!2.79e-27!112;UBERON:0004765!1.58e-23!101;UBERON:0001434!1.58e-23!101;UBERON:0000062!1.04e-13!511;UBERON:0001049!5.71e-12!57;UBERON:0005068!5.71e-12!57;UBERON:0006241!5.71e-12!57;UBERON:0007135!5.71e-12!57;UBERON:0003081!6.36e-12!216;UBERON:0002204!1.40e-10!167;UBERON:0001017!8.24e-10!82;UBERON:0002780!8.43e-10!41;UBERON:0001890!8.43e-10!41;UBERON:0006240!8.43e-10!41;UBERON:0005743!9.59e-10!86;UBERON:0003080!1.92e-09!42;UBERON:0002616!4.30e-09!59;UBERON:0003075!1.94e-08!86;UBERON:0007284!1.94e-08!86;UBERON:0000467!2.54e-08!625;UBERON:0000480!2.93e-08!626;UBERON:0000955!3.60e-08!69;UBERON:0006238!3.60e-08!69;UBERON:0000073!4.81e-08!94;UBERON:0001016!4.81e-08!94;UBERON:0001893!8.80e-08!34;UBERON:0002346!1.02e-07!90;UBERON:0001869!2.25e-07!32;UBERON:0000468!2.75e-07!659;UBERON:0000923!2.83e-07!604;UBERON:0005291!2.83e-07!604;UBERON:0006598!2.83e-07!604;UBERON:0002532!2.83e-07!604;UBERON:0000922!3.04e-07!612;UBERON:0002050!3.24e-07!605;UBERON:0005423!3.24e-07!605;UBERON:0002791!3.39e-07!33;UBERON:0002020!8.14e-07!34;UBERON:0003528!8.14e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0004177;1.95e-10;5!UBERON:0005057;1.95e-10;5!UBERON:0002240;1.82e-08;3!UBERON:0005174;1.82e-08;3!UBERON:0001137;1.82e-08;3!UBERON:0002106;3.01e-08;3!UBERON:0002363;8.47e-07;1!UBERON:0000029;8.47e-07;1!UBERON:0002084;8.47e-07;1!UBERON:0002082;8.47e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,5.38e-32,93;UBERON:0002371,1.17e-27,76;UBERON:0002390,1.71e-27,98;UBERON:0003061,1.71e-27,98;UBERON:0002193,7.20e-27,108;UBERON:0001474,2.50e-25,82;UBERON:0004765,1.06e-22,90;UBERON:0001434,5.28e-20,100;UBERON:0003081,3.92e-13,203;UBERON:0002204,3.12e-10,167;UBERON:0002240,2.24e-08,3;UBERON:0005174,2.24e-08,3;UBERON:0001137,2.24e-08,3;UBERON:0002106,3.02e-08,3;UBERON:0004854,3.02e-08,3;UBERON:0009034,3.02e-08,3;UBERON:0002095,3.02e-08,3;UBERON:0004782,3.02e-08,3;UBERON:0003281,3.02e-08,3;UBERON:0009664,3.02e-08,3;UBERON:0002296,3.02e-08,3;UBERON:0005602,3.02e-08,3;UBERON:0001179,3.02e-08,3;UBERON:0006293,3.02e-08,3;UBERON:0004177,1.48e-07,7;UBERON:0005057,1.48e-07,7;UBERON:0000926,2.33e-07,315;UBERON:0004120,2.33e-07,315;UBERON:0006603,2.33e-07,315;UBERON:0002363,5.06e-07,1;UBERON:0007645,5.06e-07,1;UBERON:0007647,5.06e-07,1;UBERON:0010115,5.06e-07,1;UBERON:0000029,5.69e-07,1;UBERON:0002084,7.15e-07,1;UBERON:0002082,7.15e-07,1;UBERON:0010226,7.15e-07,1 | |||
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|short_description=p5@MFSD1 | |short_description=p5@MFSD1 | ||
}} | }} |
Latest revision as of 09:09, 16 September 2015
Short description: | p5@MFSD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MFSD1_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 0bp_to_ENST00000465624_5end |
EntrezGene: | MFSD1 |
HGNC: | 25874 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 8.76e-37 | 59 |
monocyte | 8.76e-37 | 59 |
monoblast | 8.76e-37 | 59 |
promonocyte | 8.76e-37 | 59 |
macrophage dendritic cell progenitor | 1.89e-35 | 61 |
macrophage | 1.57e-34 | 6 |
myeloid lineage restricted progenitor cell | 1.82e-32 | 66 |
granulocyte monocyte progenitor cell | 6.39e-32 | 67 |
defensive cell | 6.18e-30 | 48 |
phagocyte | 6.18e-30 | 48 |
myeloid leukocyte | 2.01e-29 | 72 |
adult endothelial progenitor cell | 1.08e-18 | 3 |
myeloid cell | 3.34e-18 | 108 |
common myeloid progenitor | 3.34e-18 | 108 |
nongranular leukocyte | 7.87e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 6.00e-16 | 120 |
classical monocyte | 1.11e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.11e-13 | 42 |
leukocyte | 1.47e-13 | 136 |
hematopoietic oligopotent progenitor cell | 8.92e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.92e-11 | 161 |
hematopoietic stem cell | 3.80e-10 | 168 |
hematopoietic cell | 2.07e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
immune system | 5.38e-32 | 93 |
bone marrow | 1.17e-27 | 76 |
hematopoietic system | 1.71e-27 | 98 |
blood island | 1.71e-27 | 98 |
hemolymphoid system | 7.20e-27 | 108 |
bone element | 2.50e-25 | 82 |
skeletal element | 1.06e-22 | 90 |
skeletal system | 5.28e-20 | 100 |
lateral plate mesoderm | 3.92e-13 | 203 |
musculoskeletal system | 3.12e-10 | 167 |
spinal cord | 2.24e-08 | 3 |
dorsal region element | 2.24e-08 | 3 |
dorsum | 2.24e-08 | 3 |
spleen | 3.02e-08 | 3 |
gastrointestinal system mesentery | 3.02e-08 | 3 |
stomach region | 3.02e-08 | 3 |
mesentery | 3.02e-08 | 3 |
gastrointestinal system serosa | 3.02e-08 | 3 |
mesentery of stomach | 3.02e-08 | 3 |
gut mesentery | 3.02e-08 | 3 |
dorsal mesentery | 3.02e-08 | 3 |
dorsal mesogastrium | 3.02e-08 | 3 |
peritoneal cavity | 3.02e-08 | 3 |
spleen primordium | 3.02e-08 | 3 |
hemopoietic organ | 1.48e-07 | 7 |
immune organ | 1.48e-07 | 7 |
mesoderm | 2.33e-07 | 315 |
mesoderm-derived structure | 2.33e-07 | 315 |
presumptive mesoderm | 2.33e-07 | 315 |
dura mater | 5.06e-07 | 1 |
future meninx | 5.06e-07 | 1 |
ectomeninx | 5.06e-07 | 1 |
future dura mater | 5.06e-07 | 1 |
lymph node | 5.69e-07 | 1 |
heart left ventricle | 7.15e-07 | 1 |
cardiac ventricle | 7.15e-07 | 1 |
future cardiac ventricle | 7.15e-07 | 1 |