FFCP PHASE1:Hg19::chr3:182971735..182971748,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84002 | |EntrezGene=84002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15684 | |HGNC=15684 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=129bp_to_uc003fll.2_5end | |association_with_transcript=129bp_to_uc003fll.2_5end | ||
|cluster_id=chr3:182971735..182971748,+ | |||
|coexpression_cluster_id=C17 | |coexpression_cluster_id=C17 | ||
|description=CAGE_peak_20_at_B3GNT5_5end | |description=CAGE_peak_20_at_B3GNT5_5end | ||
|id=chr3:182971735..182971748,+ | |id=chr3:182971735..182971748,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.67e-42!42;CL:0000763!6.01e-40!112;CL:0000049!6.01e-40!112;CL:0000766!2.72e-39!76;CL:0000860!3.82e-38!45;CL:0000557!2.24e-33!71;CL:0000839!2.86e-32!70;CL:0002009!1.55e-30!65;CL:0002194!3.85e-30!63;CL:0000576!3.85e-30!63;CL:0000040!3.85e-30!63;CL:0000559!3.85e-30!63;CL:0000037!1.67e-22!172;CL:0000566!1.67e-22!172;CL:0002032!1.24e-21!165;CL:0000837!1.24e-21!165;CL:0000988!4.74e-20!182;CL:0000738!7.30e-20!140;CL:0002031!6.44e-14!124;CL:0002087!4.31e-13!119;CL:0002320!1.90e-10!365;CL:0000134!2.70e-09!358;CL:0000219!9.58e-09!390;CL:0000048!1.87e-08!430;CL:0000723!5.46e-08!436;CL:0000034!8.74e-08!444;CL:0000094!8.51e-07!8 | |ontology_enrichment_celltype=CL:0002057!6.67e-42!42;CL:0000763!6.01e-40!112;CL:0000049!6.01e-40!112;CL:0000766!2.72e-39!76;CL:0000860!3.82e-38!45;CL:0000557!2.24e-33!71;CL:0000839!2.86e-32!70;CL:0002009!1.55e-30!65;CL:0002194!3.85e-30!63;CL:0000576!3.85e-30!63;CL:0000040!3.85e-30!63;CL:0000559!3.85e-30!63;CL:0000037!1.67e-22!172;CL:0000566!1.67e-22!172;CL:0002032!1.24e-21!165;CL:0000837!1.24e-21!165;CL:0000988!4.74e-20!182;CL:0000738!7.30e-20!140;CL:0002031!6.44e-14!124;CL:0002087!4.31e-13!119;CL:0002320!1.90e-10!365;CL:0000134!2.70e-09!358;CL:0000219!9.58e-09!390;CL:0000048!1.87e-08!430;CL:0000723!5.46e-08!436;CL:0000034!8.74e-08!444;CL:0000094!8.51e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.43e-73;33!CL:0002057;3.43e-73;33!CL:0000473;3.15e-53;39!CL:0000234;3.15e-53;39!CL:0000576;1.43e-37;48!CL:0000766;1.31e-29;69!CL:0000763;3.09e-19;100!CL:0000094;7.06e-18;8!CL:0000775;9.68e-18;3!CL:0000081;6.20e-13;11!CL:0000771;9.13e-13;2!CL:0002087;1.65e-10;104!CL:0000738;2.51e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.30e-75,42;CL:0002057,1.30e-75,42;CL:0000766,1.82e-66,72;CL:0000473,1.67e-65,48;CL:0000234,1.67e-65,48;CL:0000763,1.13e-58,108;CL:0000049,1.13e-58,108;CL:0002009,1.13e-53,61;CL:0000557,9.94e-53,67;CL:0002194,2.39e-51,59;CL:0000576,2.39e-51,59;CL:0000040,2.39e-51,59;CL:0000559,2.39e-51,59;CL:0000839,1.36e-49,66;CL:0002032,2.10e-37,161;CL:0000837,2.10e-37,161;CL:0000037,1.37e-35,168;CL:0000738,6.33e-35,136;CL:0000988,1.82e-33,177;CL:0002031,3.63e-27,120;CL:0002087,5.51e-24,115;CL:0000094,6.37e-18,8;CL:0000775,8.19e-18,3;CL:0000134,1.68e-13,354;CL:0002320,4.12e-13,361;CL:0000081,5.76e-13,11;CL:0000771,9.14e-13,2;CL:0000219,9.86e-12,386;CL:0000048,4.83e-10,427;CL:0000723,8.26e-10,433;CL:0000034,1.65e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.41e-54;42!CL:0000049;9.58e-15;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.80e-28!80;UBERON:0002193!2.26e-26!112;UBERON:0001474!3.78e-26!86;UBERON:0002390!1.68e-24!102;UBERON:0003061!1.68e-24!102;UBERON:0004765!2.98e-24!101;UBERON:0001434!2.98e-24!101;UBERON:0002405!4.90e-23!115;UBERON:0002204!1.94e-13!167;UBERON:0003081!2.38e-10!216;UBERON:0002384!6.21e-10!375 | |ontology_enrichment_uberon=UBERON:0002371!8.80e-28!80;UBERON:0002193!2.26e-26!112;UBERON:0001474!3.78e-26!86;UBERON:0002390!1.68e-24!102;UBERON:0003061!1.68e-24!102;UBERON:0004765!2.98e-24!101;UBERON:0001434!2.98e-24!101;UBERON:0002405!4.90e-23!115;UBERON:0002204!1.94e-13!167;UBERON:0003081!2.38e-10!216;UBERON:0002384!6.21e-10!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.53e-46,76;UBERON:0001474,3.46e-42,82;UBERON:0004765,5.52e-38,90;UBERON:0002405,1.36e-36,93;UBERON:0002390,1.85e-34,98;UBERON:0003061,1.85e-34,98;UBERON:0001434,1.15e-33,100;UBERON:0002193,8.84e-31,108;UBERON:0002204,5.59e-18,167;UBERON:0003081,8.36e-14,203;UBERON:0002384,1.41e-12,371;UBERON:0000926,6.40e-07,315;UBERON:0004120,6.40e-07,315;UBERON:0006603,6.40e-07,315 | |||
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| ||
|short_description=p20@B3GNT5 | |short_description=p20@B3GNT5 | ||
}} | }} |
Latest revision as of 23:48, 16 September 2015
Short description: | p20@B3GNT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_B3GNT5_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 129bp_to_uc003fll.2_5end |
EntrezGene: | B3GNT5 |
HGNC: | 15684 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.30e-75 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.30e-75 | 42 |
myeloid leukocyte | 1.82e-66 | 72 |
defensive cell | 1.67e-65 | 48 |
phagocyte | 1.67e-65 | 48 |
myeloid cell | 1.13e-58 | 108 |
common myeloid progenitor | 1.13e-58 | 108 |
macrophage dendritic cell progenitor | 1.13e-53 | 61 |
granulocyte monocyte progenitor cell | 9.94e-53 | 67 |
monopoietic cell | 2.39e-51 | 59 |
monocyte | 2.39e-51 | 59 |
monoblast | 2.39e-51 | 59 |
promonocyte | 2.39e-51 | 59 |
myeloid lineage restricted progenitor cell | 1.36e-49 | 66 |
hematopoietic oligopotent progenitor cell | 2.10e-37 | 161 |
hematopoietic multipotent progenitor cell | 2.10e-37 | 161 |
hematopoietic stem cell | 1.37e-35 | 168 |
leukocyte | 6.33e-35 | 136 |
hematopoietic cell | 1.82e-33 | 177 |
hematopoietic lineage restricted progenitor cell | 3.63e-27 | 120 |
nongranular leukocyte | 5.51e-24 | 115 |
granulocyte | 6.37e-18 | 8 |
neutrophil | 8.19e-18 | 3 |
mesenchymal cell | 1.68e-13 | 354 |
connective tissue cell | 4.12e-13 | 361 |
blood cell | 5.76e-13 | 11 |
eosinophil | 9.14e-13 | 2 |
motile cell | 9.86e-12 | 386 |
multi fate stem cell | 4.83e-10 | 427 |
somatic stem cell | 8.26e-10 | 433 |
stem cell | 1.65e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.53e-46 | 76 |
bone element | 3.46e-42 | 82 |
skeletal element | 5.52e-38 | 90 |
immune system | 1.36e-36 | 93 |
hematopoietic system | 1.85e-34 | 98 |
blood island | 1.85e-34 | 98 |
skeletal system | 1.15e-33 | 100 |
hemolymphoid system | 8.84e-31 | 108 |
musculoskeletal system | 5.59e-18 | 167 |
lateral plate mesoderm | 8.36e-14 | 203 |
connective tissue | 1.41e-12 | 371 |
mesoderm | 6.40e-07 | 315 |
mesoderm-derived structure | 6.40e-07 | 315 |
presumptive mesoderm | 6.40e-07 | 315 |