FFCP PHASE1:Hg19::chr3:33260478..33260490,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26032 | |EntrezGene=26032 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29061 | |HGNC=29061 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-193bp_to_ENST00000412539_5end | |association_with_transcript=-193bp_to_ENST00000412539_5end | ||
|cluster_id=chr3:33260478..33260490,- | |||
|coexpression_cluster_id=C230 | |coexpression_cluster_id=C230 | ||
|description=CAGE_peak_8_at_SUSD5_5end | |description=CAGE_peak_8_at_SUSD5_5end | ||
|id=chr3:33260478..33260490,- | |id=chr3:33260478..33260490,- | ||
|ontology_enrichment_celltype=CL:0000667!3.25e-09!6;CL:0000058!3.25e-09!6;CL:0000138!3.25e-09!6 | |ontology_enrichment_celltype=CL:0000667!3.25e-09!6;CL:0000058!3.25e-09!6;CL:0000138!3.25e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0000138;2.72e-27;6!CL:0000153;1.35e-18;9!CL:0000447;1.35e-18;9!CL:0000327;1.34e-11;15!CL:0000540;6.78e-08;6!CL:0000404;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,2.38e-27,6;CL:0000138,2.38e-27,6;CL:0000153,1.24e-18,9;CL:0000447,1.24e-18,9;CL:0000327,1.27e-11,15;CL:0000540,6.78e-08,6;CL:0000031,6.78e-08,6;CL:0000404,6.78e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006965;3.11e-21;2!CL:0000031;6.78e-08;6!UBERON:0004872;5.08e-07;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:6193;2.21e-40;1!DOID:3350;5.69e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,3.30e-40,1;DOID:3350,6.96e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.45e-13!115;UBERON:0003075!7.03e-10!86;UBERON:0007284!7.03e-10!86;UBERON:0001893!1.23e-09!34;UBERON:0000073!1.68e-09!94;UBERON:0001016!1.68e-09!94;UBERON:0001017!2.19e-09!82;UBERON:0001049!2.19e-09!57;UBERON:0005068!2.19e-09!57;UBERON:0006241!2.19e-09!57;UBERON:0007135!2.19e-09!57;UBERON:0002346!3.13e-09!90;UBERON:0002780!3.70e-09!41;UBERON:0001890!3.70e-09!41;UBERON:0006240!3.70e-09!41;UBERON:0002616!5.94e-09!59;UBERON:0003080!7.01e-09!42;UBERON:0005743!9.45e-09!86;UBERON:0001869!1.20e-08!32;UBERON:0002791!2.20e-08!33;UBERON:0000955!3.97e-08!69;UBERON:0006238!3.97e-08!69;UBERON:0001875!2.01e-07!2;UBERON:0006514!2.01e-07!2;UBERON:0003056!2.44e-07!61;UBERON:0003127!3.04e-07!2 | |ontology_enrichment_uberon=UBERON:0007023!2.45e-13!115;UBERON:0003075!7.03e-10!86;UBERON:0007284!7.03e-10!86;UBERON:0001893!1.23e-09!34;UBERON:0000073!1.68e-09!94;UBERON:0001016!1.68e-09!94;UBERON:0001017!2.19e-09!82;UBERON:0001049!2.19e-09!57;UBERON:0005068!2.19e-09!57;UBERON:0006241!2.19e-09!57;UBERON:0007135!2.19e-09!57;UBERON:0002346!3.13e-09!90;UBERON:0002780!3.70e-09!41;UBERON:0001890!3.70e-09!41;UBERON:0006240!3.70e-09!41;UBERON:0002616!5.94e-09!59;UBERON:0003080!7.01e-09!42;UBERON:0005743!9.45e-09!86;UBERON:0001869!1.20e-08!32;UBERON:0002791!2.20e-08!33;UBERON:0000955!3.97e-08!69;UBERON:0006238!3.97e-08!69;UBERON:0001875!2.01e-07!2;UBERON:0006514!2.01e-07!2;UBERON:0003056!2.44e-07!61;UBERON:0003127!3.04e-07!2 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p8@SUSD5 | |short_description=p8@SUSD5 | ||
}} | }} |
Latest revision as of 00:13, 18 September 2015
Short description: | p8@SUSD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SUSD5_5end |
Coexpression cluster: | C230_aorta_normal_heart_penis_osteosarcoma_basal_lung |
Association with transcript: | -193bp_to_ENST00000412539_5end |
EntrezGene: | SUSD5 |
HGNC: | 29061 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 2.38e-27 | 6 |
chondrocyte | 2.38e-27 | 6 |
GAG secreting cell | 1.24e-18 | 9 |
carbohydrate secreting cell | 1.24e-18 | 9 |
extracellular matrix secreting cell | 1.27e-11 | 15 |
neuron | 6.78e-08 | 6 |
neuroblast | 6.78e-08 | 6 |
electrically signaling cell | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 3.30e-40 | 1 |
mesenchymal cell neoplasm | 6.96e-21 | 2 |