FFCP PHASE1:Hg19::chr3:52719543..52719576,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26354 | |EntrezGene=26354 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29931 | |HGNC=29931 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BVP2 | |UniProt=Q9BVP2 | ||
|association_with_transcript=-359bp_to_ENST00000418458,NM_014366,NM_206825,NM_206826,uc003dfd.2,uc003dfe.2,uc003dff.2,uc011beh.1_5end | |association_with_transcript=-359bp_to_ENST00000418458,NM_014366,NM_206825,NM_206826,uc003dfd.2,uc003dfe.2,uc003dff.2,uc011beh.1_5end | ||
|cluster_id=chr3:52719543..52719576,+ | |||
|coexpression_cluster_id=C75 | |coexpression_cluster_id=C75 | ||
|description=CAGE_peak_12_at_GNL3_5end | |description=CAGE_peak_12_at_GNL3_5end | ||
|id=chr3:52719543..52719576,+ | |id=chr3:52719543..52719576,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.25e-25!140;CL:0000988!1.54e-21!182;CL:0000037!2.82e-21!172;CL:0000566!2.82e-21!172;CL:0002032!6.77e-16!165;CL:0000837!6.77e-16!165;CL:0002031!9.30e-15!124;CL:0000838!1.22e-14!52;CL:0002087!1.57e-14!119;CL:0000542!2.96e-14!53;CL:0000051!2.96e-14!53;CL:0000094!7.46e-11!8;CL:0000081!2.74e-10!11;CL:0000080!1.16e-09!6;CL:0000623!9.34e-09!3;CL:0000825!9.34e-09!3;CL:0000767!5.84e-08!3;CL:0000842!7.04e-08!3;CL:0000084!9.51e-08!25;CL:0000827!9.51e-08!25;CL:0000624!4.81e-07!6 | |ontology_enrichment_celltype=CL:0000738!5.25e-25!140;CL:0000988!1.54e-21!182;CL:0000037!2.82e-21!172;CL:0000566!2.82e-21!172;CL:0002032!6.77e-16!165;CL:0000837!6.77e-16!165;CL:0002031!9.30e-15!124;CL:0000838!1.22e-14!52;CL:0002087!1.57e-14!119;CL:0000542!2.96e-14!53;CL:0000051!2.96e-14!53;CL:0000094!7.46e-11!8;CL:0000081!2.74e-10!11;CL:0000080!1.16e-09!6;CL:0000623!9.34e-09!3;CL:0000825!9.34e-09!3;CL:0000767!5.84e-08!3;CL:0000842!7.04e-08!3;CL:0000084!9.51e-08!25;CL:0000827!9.51e-08!25;CL:0000624!4.81e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000623;2.37e-28;3!CL:0000771;2.60e-19;2!CL:0000791;1.22e-17;18!CL:0000789;1.22e-17;18!CL:0002419;1.22e-17;18!CL:0002393;1.52e-14;6!CL:0002397;1.52e-14;6!CL:0000624;3.36e-14;6!CL:0000084;1.37e-12;25!CL:0000542;2.28e-11;53!CL:0000094;9.10e-11;8!CL:0000081;5.74e-08;11!CL:0000625;6.16e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.06e-28,3;CL:0000825,2.06e-28,3;CL:0000738,1.77e-23,136;CL:0000838,2.06e-19,52;CL:0000771,2.61e-19,2;CL:0000542,5.14e-19,53;CL:0000051,5.14e-19,53;CL:0000037,1.83e-18,168;CL:0000791,1.13e-17,18;CL:0000789,1.13e-17,18;CL:0002420,1.13e-17,18;CL:0002419,1.13e-17,18;CL:0000790,1.13e-17,18;CL:0000988,2.23e-17,177;CL:0002032,2.60e-17,161;CL:0000837,2.60e-17,161;CL:0002031,1.26e-16,120;CL:0000624,2.74e-14,6;CL:0002087,4.18e-13,115;CL:0000084,1.30e-12,25;CL:0000827,1.30e-12,25;CL:0000094,9.41e-11,8;CL:0002393,6.68e-10,9;CL:0002397,6.68e-10,9;CL:0000081,5.88e-08,11;CL:0000625,6.47e-08,11;CL:0000134,4.03e-07,354;CL:0002320,6.42e-07,361;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000790;1.22e-17;18!CL:0000051;2.28e-11;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p12@GNL3 | |short_description=p12@GNL3 | ||
}} | }} |
Latest revision as of 00:35, 19 September 2015
Short description: | p12@GNL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_GNL3_5end |
Coexpression cluster: | C75_Eosinophils_Natural_CD8_Basophils_CD14_CD4_Peripheral |
Association with transcript: | -359bp_to_ENST00000418458, NM_014366, NM_206825, NM_206826, uc003dfd.2, uc003dfe.2, uc003dff.2, uc011beh.1_5end |
EntrezGene: | GNL3 |
HGNC: | 29931 |
UniProt: | Q9BVP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.06e-28 | 3 |
pro-NK cell | 2.06e-28 | 3 |
leukocyte | 1.77e-23 | 136 |
lymphoid lineage restricted progenitor cell | 2.06e-19 | 52 |
eosinophil | 2.61e-19 | 2 |
lymphocyte | 5.14e-19 | 53 |
common lymphoid progenitor | 5.14e-19 | 53 |
hematopoietic stem cell | 1.83e-18 | 168 |
mature alpha-beta T cell | 1.13e-17 | 18 |
alpha-beta T cell | 1.13e-17 | 18 |
immature T cell | 1.13e-17 | 18 |
mature T cell | 1.13e-17 | 18 |
immature alpha-beta T cell | 1.13e-17 | 18 |
hematopoietic cell | 2.23e-17 | 177 |
hematopoietic oligopotent progenitor cell | 2.60e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.60e-17 | 161 |
hematopoietic lineage restricted progenitor cell | 1.26e-16 | 120 |
CD4-positive, alpha-beta T cell | 2.74e-14 | 6 |
nongranular leukocyte | 4.18e-13 | 115 |
T cell | 1.30e-12 | 25 |
pro-T cell | 1.30e-12 | 25 |
granulocyte | 9.41e-11 | 8 |
intermediate monocyte | 6.68e-10 | 9 |
CD14-positive, CD16-positive monocyte | 6.68e-10 | 9 |
blood cell | 5.88e-08 | 11 |
CD8-positive, alpha-beta T cell | 6.47e-08 | 11 |
mesenchymal cell | 4.03e-07 | 354 |
connective tissue cell | 6.42e-07 | 361 |
stem cell | 9.09e-07 | 441 |