FFCP PHASE1:Hg19::chr4:101439101..101439106,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51705 | |EntrezGene=51705 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16041 | |HGNC=16041 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=48bp_to_ENST00000502744_5end | |association_with_transcript=48bp_to_ENST00000502744_5end | ||
|cluster_id=chr4:101439101..101439106,- | |||
|coexpression_cluster_id=C856 | |coexpression_cluster_id=C856 | ||
|description=CAGE_peak_7_at_EMCN_5end | |description=CAGE_peak_7_at_EMCN_5end | ||
|id=chr4:101439101..101439106,- | |id=chr4:101439101..101439106,- | ||
|ontology_enrichment_celltype=CL:0002139!6.53e-25!24;CL:0000115!1.79e-18!35;CL:0000071!2.88e-16!18;CL:0002546!2.88e-16!18;CL:0002078!3.20e-13!44;CL:0005020!1.10e-10!6;CL:0002138!1.10e-10!6;CL:0005022!1.10e-10!6;CL:1000413!9.16e-10!9;CL:0000213!1.08e-08!57;CL:0000215!1.08e-08!57;CL:0002544!9.84e-07!6 | |ontology_enrichment_celltype=CL:0002139!6.53e-25!24;CL:0000115!1.79e-18!35;CL:0000071!2.88e-16!18;CL:0002546!2.88e-16!18;CL:0002078!3.20e-13!44;CL:0005020!1.10e-10!6;CL:0002138!1.10e-10!6;CL:0005022!1.10e-10!6;CL:1000413!9.16e-10!9;CL:0000213!1.08e-08!57;CL:0000215!1.08e-08!57;CL:0002544!9.84e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002618;8.58e-13;3!CL:0002139;2.67e-12;24!CL:0002138;1.24e-11;6!CL:0000115;4.43e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002618,1.31e-12,3;CL:0002139,2.98e-12,24;CL:0005020,1.35e-11,6;CL:0002138,1.35e-11,6;CL:0005022,1.35e-11,6;CL:0000115,2.37e-09,36;CL:0002078,4.26e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;1.24e-11;6!UBERON:0006603;2.46e-08;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.29e-45!115;UBERON:0004111!4.03e-17!241;UBERON:0001986!2.88e-16!18;UBERON:0004638!2.88e-16!18;UBERON:0004852!2.88e-16!18;UBERON:0000477!7.06e-16!286;UBERON:0000025!7.33e-13!194;UBERON:0000487!1.64e-12!22;UBERON:0001049!2.27e-11!57;UBERON:0005068!2.27e-11!57;UBERON:0006241!2.27e-11!57;UBERON:0007135!2.27e-11!57;UBERON:0006914!1.66e-10!25;UBERON:0003915!9.16e-10!9;UBERON:0004700!9.16e-10!9;UBERON:0001917!9.16e-10!9;UBERON:0002616!9.21e-10!59;UBERON:0000055!1.94e-09!69;UBERON:0003075!7.58e-09!86;UBERON:0007284!7.58e-09!86;UBERON:0004872!1.15e-08!84;UBERON:0003080!3.17e-08!42;UBERON:0000468!3.31e-08!659;UBERON:0000467!4.23e-08!625;UBERON:0002346!4.24e-08!90;UBERON:0002049!4.62e-08!79;UBERON:0007798!4.62e-08!79;UBERON:0000480!4.88e-08!626;UBERON:0001009!5.21e-08!113;UBERON:0000955!5.37e-08!69;UBERON:0006238!5.37e-08!69;UBERON:0005743!8.66e-08!86;UBERON:0001017!8.87e-08!82;UBERON:0004535!9.82e-08!110;UBERON:0001473!1.02e-07!8;UBERON:0004536!1.02e-07!8;UBERON:0006558!1.02e-07!8;UBERON:0002465!1.10e-07!10;UBERON:0000483!1.27e-07!309;UBERON:0002780!2.10e-07!41;UBERON:0001890!2.10e-07!41;UBERON:0006240!2.10e-07!41;UBERON:0000119!2.18e-07!312 | |ontology_enrichment_uberon=UBERON:0007023!5.29e-45!115;UBERON:0004111!4.03e-17!241;UBERON:0001986!2.88e-16!18;UBERON:0004638!2.88e-16!18;UBERON:0004852!2.88e-16!18;UBERON:0000477!7.06e-16!286;UBERON:0000025!7.33e-13!194;UBERON:0000487!1.64e-12!22;UBERON:0001049!2.27e-11!57;UBERON:0005068!2.27e-11!57;UBERON:0006241!2.27e-11!57;UBERON:0007135!2.27e-11!57;UBERON:0006914!1.66e-10!25;UBERON:0003915!9.16e-10!9;UBERON:0004700!9.16e-10!9;UBERON:0001917!9.16e-10!9;UBERON:0002616!9.21e-10!59;UBERON:0000055!1.94e-09!69;UBERON:0003075!7.58e-09!86;UBERON:0007284!7.58e-09!86;UBERON:0004872!1.15e-08!84;UBERON:0003080!3.17e-08!42;UBERON:0000468!3.31e-08!659;UBERON:0000467!4.23e-08!625;UBERON:0002346!4.24e-08!90;UBERON:0002049!4.62e-08!79;UBERON:0007798!4.62e-08!79;UBERON:0000480!4.88e-08!626;UBERON:0001009!5.21e-08!113;UBERON:0000955!5.37e-08!69;UBERON:0006238!5.37e-08!69;UBERON:0005743!8.66e-08!86;UBERON:0001017!8.87e-08!82;UBERON:0004535!9.82e-08!110;UBERON:0001473!1.02e-07!8;UBERON:0004536!1.02e-07!8;UBERON:0006558!1.02e-07!8;UBERON:0002465!1.10e-07!10;UBERON:0000483!1.27e-07!309;UBERON:0002780!2.10e-07!41;UBERON:0001890!2.10e-07!41;UBERON:0006240!2.10e-07!41;UBERON:0000119!2.18e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0000341;2.66e-09;2!UBERON:0001473;1.01e-08;8!UBERON:0004536;1.01e-08;8!UBERON:0006558;1.01e-08;8!UBERON:0002066;7.68e-08;5!UBERON:0002465;5.72e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.25e-17,114;UBERON:0000341,3.20e-09,2;UBERON:0001473,1.08e-08,8;UBERON:0004536,1.08e-08,8;UBERON:0006558,1.08e-08,8;UBERON:0002066,9.83e-08,5;UBERON:0003103,2.97e-07,68;UBERON:0002465,6.00e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,1.59009925893364,0.860234595106124,0.694281003215189,0.56530794192401,0.419499436209906,0.550236083880135,0.208994966536811,9.8198368484345,11.028754143288,5.35552980423472,0.805658634218294,0.760272105718513,0.976248230192678,3.67663080345869,0,6.1616812516015,2.02076435363553,1.23872628531654,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0,0.576175924479999,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16549671641611,0.925971025153221,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51141141271498,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4906390476222,0,0,0,0.23874448473769,0,0,0,0,0,0,0,1.19548792950642,0.828851746593443,0,0,0,0,0,0,0,1.7755813014648,0,0,0,0.74214478529481,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,3.07801034015188,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,1.22206028986725,0,0,0,0.269604531922708,1.60515529459758,0,0,0,0,0.789168805698781,1.20990716048664,0,1.26373159256976,0,0,0,0,0,0,0,0,0,0,0,2.27144668714639,0,0,0,0,1.74580229679155,0,0.225980740780532,0,0,0.189932387867636,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,4.18923601908381,3.66656678418694,0,0,0,2.4548860318606,2.41860500952215,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.303747783290123,0,1.97014268247995,0.681909645754975,0,0,0,3.57347663186684,3.31045985182716,0,0,0,0,0,0,0,0,0.439656701034247,0,0.129282956361551,0,0,0,1.28144895081234,2.82967749179399,1.65695622138878,0,0,0,0,1.08803560673895,1.5041393641362,0.919036730290385,0.655745261419609,0,0,0.244052529803926,0.3755727921195,0,0.665574309221114,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,1.20336525358812,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0,0,0,3.96968942711435,0,0,0,0.672567444437648,0,0.455324382702595,0.177404740325278,0,0,0.475788130837822,0.0657727735628491,0,0,1.64835494986079,0.471346769748006,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,1.12929087541872,1.1598144313382,1.94284397223656,0,0,0,0,0,0,0.540219106755613,0.655678681511872,0,1.71603825227734,0,0.785233868459781,0,0.4226557275834,0,0.187967835959707,0.193373663920732,0,0,0,0,1.46067277649303,0.458729283404541,0,0,0.135982980381829,0.436350690340377,1.5870805215462,0,0,0,0,0,0,0,0,0,0,1.43979526614655,0,0,0.20686599172379,3.41174371041569,2.14257988317366,0.193766729508018,0.248298857183432,0,0.700118741059814,0.808468755832877,3.04803447055746,2.73786640868225,0.336760265072938,0.430333232356058,2.99394320891412,0,0,0,0,0,1.71138021856013,1.62758471326295,1.33151354837103,0.805095174364105,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,1.59009925893364,0.860234595106124,0.694281003215189,0.56530794192401,0.419499436209906,0.550236083880135,0.208994966536811,9.8198368484345,11.028754143288,5.35552980423472,0.805658634218294,0.760272105718513,0.976248230192678,3.67663080345869,0,6.1616812516015,2.02076435363553,1.23872628531654,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0,0.576175924479999,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16549671641611,0.925971025153221,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51141141271498,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4906390476222,0,0,0,0.23874448473769,0,0,0,0,0,0,0,1.19548792950642,0.828851746593443,0,0,0,0,0,0,0,1.7755813014648,0,0,0,0.74214478529481,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,3.07801034015188,0,0,0,0,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,1.22206028986725,0,0,0,0.269604531922708,1.60515529459758,0,0,0,0,0.789168805698781,1.20990716048664,0,1.26373159256976,0,0,0,0,0,0,0,0,0,0,0,2.27144668714639,0,0,0,0,1.74580229679155,0,0.225980740780532,0,0,0.189932387867636,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,4.18923601908381,3.66656678418694,0,0,0,2.4548860318606,2.41860500952215,0,0,0,0,0,0,0,0.795229689809303,0.544813624446302,0,0,0,0,0,0.303747783290123,0,1.97014268247995,0.681909645754975,0,0,0,3.57347663186684,3.31045985182716,0,0,0,0,0,0,0,0,0.439656701034247,0,0.129282956361551,0,0,0,1.28144895081234,2.82967749179399,1.65695622138878,0,0,0,0,1.08803560673895,1.5041393641362,0.919036730290385,0.655745261419609,0,0,0.244052529803926,0.3755727921195,0,0.665574309221114,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,1.20336525358812,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0,0,0,3.96968942711435,0,0,0,0.672567444437648,0,0.455324382702595,0.177404740325278,0,0,0.475788130837822,0.0657727735628491,0,0,1.64835494986079,0.471346769748006,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,1.12929087541872,1.1598144313382,1.94284397223656,0,0,0,0,0,0,0.540219106755613,0.655678681511872,0,1.71603825227734,0,0.785233868459781,0,0.4226557275834,0,0.187967835959707,0.193373663920732,0,0,0,0,1.46067277649303,0.458729283404541,0,0,0.135982980381829,0.436350690340377,1.5870805215462,0,0,0,0,0,0,0,0,0,0,1.43979526614655,0,0,0.20686599172379,3.41174371041569,2.14257988317366,0.193766729508018,0.248298857183432,0,0.700118741059814,0.808468755832877,3.04803447055746,2.73786640868225,0.336760265072938,0.430333232356058,2.99394320891412,0,0,0,0,0,1.71138021856013,1.62758471326295,1.33151354837103,0.805095174364105,0 | ||
|short_description=p7@EMCN | |short_description=p7@EMCN | ||
}} | }} |
Latest revision as of 02:46, 20 September 2015
Short description: | p7@EMCN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_EMCN_5end |
Coexpression cluster: | C856_Endothelial_lung_diaphragm_left_kidney_heart_Hepatic |
Association with transcript: | 48bp_to_ENST00000502744_5end |
EntrezGene: | EMCN |
HGNC: | 16041 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 1.31e-12 | 3 |
endothelial cell of vascular tree | 2.98e-12 | 24 |
lymphangioblast | 1.35e-11 | 6 |
endothelial cell of lymphatic vessel | 1.35e-11 | 6 |
vascular lymphangioblast | 1.35e-11 | 6 |
endothelial cell | 2.37e-09 | 36 |
meso-epithelial cell | 4.26e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.25e-17 | 114 |
throat | 3.20e-09 | 2 |
lymphatic vessel | 1.08e-08 | 8 |
lymph vasculature | 1.08e-08 | 8 |
lymphatic part of lymphoid system | 1.08e-08 | 8 |
umbilical vein | 9.83e-08 | 5 |
compound organ | 2.97e-07 | 68 |
lymphoid system | 6.00e-07 | 10 |