FFCP PHASE1:Hg19::chr19:35521572..35521584,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:35521572..35521584,+
|short_description=p9@SCN1B
|description=CAGE_peak_9_at_SCN1B_5end
|association_with_transcript=-7bp_to_ENST00000262631,ENST000004159...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6324 | |EntrezGene=6324 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10586 | |HGNC=10586 | ||
|TSSclassifier=strong | |||
|UniProt=Q07699 | |UniProt=Q07699 | ||
|association_with_transcript=-7bp_to_ENST00000262631,ENST00000415950,NM_001037,NM_199037_5end | |||
|cluster_id=chr19:35521572..35521584,+ | |||
|description=CAGE_peak_9_at_SCN1B_5end | |||
|id=chr19:35521572..35521584,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;9.42e-10;1!CL:0002625;9.42e-10;1!CL:0000216;9.42e-10;1!CL:0000222;3.00e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,8.68e-10,1;CL:0002625,8.68e-10,1;CL:0000216,8.68e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.91e-12;3!UBERON:0006222;3.00e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.85e-22!115;UBERON:0001049!9.65e-19!57;UBERON:0005068!9.65e-19!57;UBERON:0006241!9.65e-19!57;UBERON:0007135!9.65e-19!57;UBERON:0002616!2.06e-17!59;UBERON:0000477!7.99e-17!286;UBERON:0004111!4.74e-16!241;UBERON:0000955!6.66e-16!69;UBERON:0006238!6.66e-16!69;UBERON:0000483!3.97e-15!309;UBERON:0000119!4.27e-15!312;UBERON:0001017!4.69e-15!82;UBERON:0003075!1.27e-14!86;UBERON:0007284!1.27e-14!86;UBERON:0005743!1.50e-14!86;UBERON:0000025!2.53e-14!194;UBERON:0002780!5.21e-14!41;UBERON:0001890!5.21e-14!41;UBERON:0006240!5.21e-14!41;UBERON:0003080!1.85e-13!42;UBERON:0002346!2.52e-13!90;UBERON:0001893!1.03e-12!34;UBERON:0001950!1.15e-12!20;UBERON:0001869!1.37e-12!32;UBERON:0002619!1.46e-12!22;UBERON:0002020!1.47e-12!34;UBERON:0003528!1.47e-12!34;UBERON:0000073!7.83e-12!94;UBERON:0001016!7.83e-12!94;UBERON:0002791!8.12e-12!33;UBERON:0000956!2.09e-10!25;UBERON:0000203!2.09e-10!25;UBERON:0000033!9.49e-09!123;UBERON:0000153!4.04e-08!129;UBERON:0007811!4.04e-08!129;UBERON:0003056!4.50e-08!61;UBERON:0000475!1.06e-07!365;UBERON:0004121!3.21e-07!169;UBERON:0000468!3.45e-07!659;UBERON:0000200!5.68e-07!6;UBERON:0000481!7.13e-07!347;UBERON:0000467!7.35e-07!625;UBERON:0000480!8.77e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;4.21e-15;5!UBERON:0002680;1.24e-14;9!UBERON:0001895;1.24e-14;9!UBERON:0001950;2.60e-13;20!UBERON:0002619;4.10e-12;22!UBERON:0000988;9.82e-12;3!UBERON:0004733;5.08e-11;12!UBERON:0002028;5.08e-11;12!UBERON:0000956;1.16e-10;25!UBERON:0000203;1.16e-10;25!UBERON:0004732;3.48e-10;13!UBERON:0001893;3.73e-10;34!UBERON:0001869;3.75e-10;32!UBERON:0002902;9.42e-10;1!UBERON:0001136;9.42e-10;1!UBERON:0001343;9.42e-10;1!UBERON:0009899;9.42e-10;1!UBERON:0004910;9.42e-10;1!UBERON:0004813;9.42e-10;1!UBERON:0002581;1.32e-09;1!UBERON:0001282;3.00e-09;1!UBERON:0009842;3.00e-09;1!UBERON:0003704;3.00e-09;1!UBERON:0007190;3.00e-09;1!UBERON:0001171;3.00e-09;1!UBERON:0001172;3.00e-09;1!UBERON:0000073;3.87e-09;53!UBERON:0002616;3.87e-09;53!UBERON:0000955;3.94e-09;68!UBERON:0002780;7.32e-09;41!UBERON:0001890;7.32e-09;41!UBERON:0003528;3.27e-08;34!UBERON:0002020;3.27e-08;34!UBERON:0002791;5.31e-08;32!UBERON:0001872;2.21e-07;5!UBERON:0001017;4.54e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.21e-19,53;UBERON:0002616,2.21e-19,53;UBERON:0001049,2.97e-18,56;UBERON:0005068,2.97e-18,56;UBERON:0006241,2.97e-18,56;UBERON:0007135,2.97e-18,56;UBERON:0000955,3.41e-17,68;UBERON:0006238,3.41e-17,68;UBERON:0002021,3.32e-15,5;UBERON:0002680,1.16e-14,9;UBERON:0001895,1.16e-14,9;UBERON:0010092,1.16e-14,9;UBERON:0001017,3.85e-14,81;UBERON:0001950,2.33e-13,20;UBERON:0001016,1.57e-12,89;UBERON:0002619,3.72e-12,22;UBERON:0003075,6.92e-12,82;UBERON:0007284,6.92e-12,82;UBERON:0000988,1.22e-11,3;UBERON:0007023,2.49e-11,114;UBERON:0002346,3.03e-11,86;UBERON:0002780,3.34e-11,41;UBERON:0001890,3.34e-11,41;UBERON:0003080,3.34e-11,41;UBERON:0006240,3.34e-11,41;UBERON:0001869,3.47e-11,32;UBERON:0004733,4.83e-11,12;UBERON:0002028,4.83e-11,12;UBERON:0007277,4.83e-11,12;UBERON:0000956,1.07e-10,25;UBERON:0000203,1.07e-10,25;UBERON:0001893,1.67e-10,34;UBERON:0003528,1.92e-10,34;UBERON:0002020,1.92e-10,34;UBERON:0004732,3.33e-10,13;UBERON:0001136,8.68e-10,1;UBERON:0001343,8.68e-10,1;UBERON:0004910,8.68e-10,1;UBERON:0005154,8.68e-10,1;UBERON:0005295,8.68e-10,1;UBERON:0004813,8.68e-10,1;UBERON:0005297,8.68e-10,1;UBERON:0005294,8.68e-10,1;UBERON:0010141,8.68e-10,1;UBERON:0005891,8.68e-10,1;UBERON:0002902,1.12e-09,1;UBERON:0009899,1.12e-09,1;UBERON:0002581,1.32e-09,1;UBERON:0007190,2.16e-09,1;UBERON:0001282,5.28e-09,1;UBERON:0009842,5.28e-09,1;UBERON:0003704,5.28e-09,1;UBERON:0001171,5.28e-09,1;UBERON:0001172,5.28e-09,1;UBERON:0010371,5.82e-09,104;UBERON:0003076,7.31e-09,15;UBERON:0003057,7.31e-09,15;UBERON:0002791,2.52e-08,32;UBERON:0010314,6.54e-08,132;UBERON:0001872,1.71e-07,5;UBERON:0003056,3.03e-07,61 | |||
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| ||
|short_description=p9@SCN1B | |||
}} | }} |
Latest revision as of 09:27, 17 September 2015
Short description: | p9@SCN1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SCN1B_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000262631, ENST00000415950, NM_001037, NM_199037_5end |
EntrezGene: | SCN1B |
HGNC: | 10586 |
UniProt: | Q07699 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 8.68e-10 | 1 |
seminiferous tubule epithelial cell | 8.68e-10 | 1 |
Sertoli cell | 8.68e-10 | 1 |