FFCP PHASE1:Hg19::chr4:74274319..74274349,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=213 | |EntrezGene=213 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=399 | |HGNC=399 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000505649_5end | |association_with_transcript=-5bp_to_ENST00000505649_5end | ||
|cluster_id=chr4:74274319..74274349,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_11_at_ALB_5end | |description=CAGE_peak_11_at_ALB_5end | ||
|id=chr4:74274319..74274349,+ | |id=chr4:74274319..74274349,+ | ||
|ontology_enrichment_celltype=CL:0000181!7.04e-26!12;CL:0000417!7.04e-26!12;CL:0000668!7.04e-26!12;CL:0000414!7.04e-26!12;CL:0000412!7.04e-26!12;CL:0000182!7.04e-26!12;CL:0000223!3.97e-09!59 | |ontology_enrichment_celltype=CL:0000181!7.04e-26!12;CL:0000417!7.04e-26!12;CL:0000668!7.04e-26!12;CL:0000414!7.04e-26!12;CL:0000412!7.04e-26!12;CL:0000182!7.04e-26!12;CL:0000223!3.97e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.09e-42;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.09e-42,12;CL:0000223,1.56e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.40e-32;11!UBERON:0009497;2.13e-27;13!UBERON:0001041;6.57e-12;30!UBERON:0003104;1.64e-11;31!CL:0000223;9.43e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!6.63e-28!26;UBERON:0002107!1.59e-26!19;UBERON:0006925!1.59e-26!19;UBERON:0008836!1.59e-26!19;UBERON:0008835!1.05e-22!22;UBERON:0003894!1.05e-22!22;UBERON:0009854!1.18e-21!23;UBERON:0007499!8.38e-20!25;UBERON:0009497!8.38e-20!25;UBERON:0000015!8.38e-20!25;UBERON:0002423!8.38e-20!25;UBERON:0006235!8.38e-20!25;UBERON:0004161!8.38e-20!25;UBERON:0009856!5.53e-19!26;UBERON:0002368!8.73e-17!35;UBERON:0002365!1.11e-15!31;UBERON:0002330!1.11e-15!31;UBERON:0000949!2.22e-15!45;UBERON:0003929!7.24e-15!54;UBERON:0005172!4.00e-12!55;UBERON:0005173!4.00e-12!55;UBERON:0002530!3.46e-11!59;UBERON:0002417!9.88e-11!61;UBERON:0000916!9.88e-11!61;UBERON:0004921!2.74e-09!129;UBERON:0004185!2.74e-09!129;UBERON:0003978!3.84e-09!3;UBERON:0009751!3.84e-09!3;UBERON:0000946!3.84e-09!3;UBERON:0002523!3.84e-09!3;UBERON:0005983!3.84e-09!3;UBERON:0002165!3.84e-09!3;UBERON:0002062!3.84e-09!3;UBERON:0007280!3.84e-09!3;UBERON:0005911!5.24e-09!82;UBERON:0002135!1.58e-07!1;UBERON:0002146!2.04e-07!1;UBERON:0005623!2.04e-07!1;UBERON:0001007!3.26e-07!155;UBERON:0001555!3.26e-07!155;UBERON:0007026!3.26e-07!155;UBERON:0001041!3.73e-07!98;UBERON:0000077!7.49e-07!130 | |ontology_enrichment_uberon=UBERON:0005057!6.63e-28!26;UBERON:0002107!1.59e-26!19;UBERON:0006925!1.59e-26!19;UBERON:0008836!1.59e-26!19;UBERON:0008835!1.05e-22!22;UBERON:0003894!1.05e-22!22;UBERON:0009854!1.18e-21!23;UBERON:0007499!8.38e-20!25;UBERON:0009497!8.38e-20!25;UBERON:0000015!8.38e-20!25;UBERON:0002423!8.38e-20!25;UBERON:0006235!8.38e-20!25;UBERON:0004161!8.38e-20!25;UBERON:0009856!5.53e-19!26;UBERON:0002368!8.73e-17!35;UBERON:0002365!1.11e-15!31;UBERON:0002330!1.11e-15!31;UBERON:0000949!2.22e-15!45;UBERON:0003929!7.24e-15!54;UBERON:0005172!4.00e-12!55;UBERON:0005173!4.00e-12!55;UBERON:0002530!3.46e-11!59;UBERON:0002417!9.88e-11!61;UBERON:0000916!9.88e-11!61;UBERON:0004921!2.74e-09!129;UBERON:0004185!2.74e-09!129;UBERON:0003978!3.84e-09!3;UBERON:0009751!3.84e-09!3;UBERON:0000946!3.84e-09!3;UBERON:0002523!3.84e-09!3;UBERON:0005983!3.84e-09!3;UBERON:0002165!3.84e-09!3;UBERON:0002062!3.84e-09!3;UBERON:0007280!3.84e-09!3;UBERON:0005911!5.24e-09!82;UBERON:0002135!1.58e-07!1;UBERON:0002146!2.04e-07!1;UBERON:0005623!2.04e-07!1;UBERON:0001007!3.26e-07!155;UBERON:0001555!3.26e-07!155;UBERON:0007026!3.26e-07!155;UBERON:0001041!3.73e-07!98;UBERON:0000077!7.49e-07!130 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.27e-47;19!UBERON:0006925;2.27e-47;19!UBERON:0002423;6.89e-36;25!UBERON:0002365;9.40e-28;31!UBERON:0002330;9.40e-28;31!UBERON:0002368;1.75e-24;33!UBERON:0000949;2.01e-21;43!UBERON:0005172;9.59e-11;52!UBERON:0005173;9.59e-11;52!UBERON:0002417;1.89e-09;58!UBERON:0000916;1.89e-09;58!UBERON:0002530;2.45e-09;57!UBERON:0001007;1.33e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.27e-47,19;UBERON:0006925,2.27e-47,19;UBERON:0008836,2.27e-47,19;UBERON:0008835,7.55e-41,22;UBERON:0003894,7.55e-41,22;UBERON:0009854,4.73e-39,23;UBERON:0007499,6.89e-36,25;UBERON:0009497,6.89e-36,25;UBERON:0000015,6.89e-36,25;UBERON:0002423,6.89e-36,25;UBERON:0006235,6.89e-36,25;UBERON:0004161,6.89e-36,25;UBERON:0009856,1.73e-34,26;UBERON:0002365,7.68e-29,31;UBERON:0002330,7.68e-29,31;UBERON:0002368,1.76e-25,35;UBERON:0000949,8.17e-25,45;UBERON:0003929,1.54e-20,54;UBERON:0005172,2.68e-16,54;UBERON:0005173,2.68e-16,54;UBERON:0002530,7.34e-15,59;UBERON:0002417,1.33e-14,60;UBERON:0000916,1.33e-14,60;UBERON:0005911,3.07e-13,82;UBERON:0005177,1.39e-10,101;UBERON:0001041,7.56e-10,87;UBERON:0004921,7.76e-09,118;UBERON:0009569,1.77e-07,112;UBERON:0003914,4.01e-07,117;UBERON:0001007,5.07e-07,145;UBERON:0001555,5.07e-07,145;UBERON:0007026,5.07e-07,145;UBERON:0000490,6.50e-07,148;UBERON:0005256,8.47e-07,122 | |||
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|short_description=p11@ALB | |short_description=p11@ALB | ||
}} | }} |
Latest revision as of 12:38, 18 September 2015
Short description: | p11@ALB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ALB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -5bp_to_ENST00000505649_5end |
EntrezGene: | ALB |
HGNC: | 399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.09e-42 | 12 |
endodermal cell | 1.56e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.27e-47 | 19 |
digestive gland | 2.27e-47 | 19 |
liver bud | 2.27e-47 | 19 |
hepatic diverticulum | 7.55e-41 | 22 |
liver primordium | 7.55e-41 | 22 |
digestive tract diverticulum | 4.73e-39 | 23 |
epithelial sac | 6.89e-36 | 25 |
epithelium of foregut-midgut junction | 6.89e-36 | 25 |
anatomical boundary | 6.89e-36 | 25 |
hepatobiliary system | 6.89e-36 | 25 |
foregut-midgut junction | 6.89e-36 | 25 |
septum transversum | 6.89e-36 | 25 |
sac | 1.73e-34 | 26 |
exocrine gland | 7.68e-29 | 31 |
exocrine system | 7.68e-29 | 31 |
endocrine gland | 1.76e-25 | 35 |
endocrine system | 8.17e-25 | 45 |
gut epithelium | 1.54e-20 | 54 |
abdomen element | 2.68e-16 | 54 |
abdominal segment element | 2.68e-16 | 54 |
gland | 7.34e-15 | 59 |
abdominal segment of trunk | 1.33e-14 | 60 |
abdomen | 1.33e-14 | 60 |
endo-epithelium | 3.07e-13 | 82 |
trunk region element | 1.39e-10 | 101 |
foregut | 7.56e-10 | 87 |
subdivision of digestive tract | 7.76e-09 | 118 |
subdivision of trunk | 1.77e-07 | 112 |
epithelial tube | 4.01e-07 | 117 |
digestive system | 5.07e-07 | 145 |
digestive tract | 5.07e-07 | 145 |
primitive gut | 5.07e-07 | 145 |
unilaminar epithelium | 6.50e-07 | 148 |
trunk mesenchyme | 8.47e-07 | 122 |