FFCP PHASE1:Hg19::chr5:14441157..14441216,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7204 | |EntrezGene=7204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12303 | |HGNC=12303 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=229bp_to_ENST00000515710,uc003jfi.1_5end | |association_with_transcript=229bp_to_ENST00000515710,uc003jfi.1_5end | ||
|cluster_id=chr5:14441157..14441216,+ | |||
|coexpression_cluster_id=C950 | |coexpression_cluster_id=C950 | ||
|description=CAGE_peak_3_at_TRIO_5end | |description=CAGE_peak_3_at_TRIO_5end | ||
|id=chr5:14441157..14441216,+ | |id=chr5:14441157..14441216,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.72e-22!180;CL:0000057!1.97e-15!75;CL:0000183!1.26e-14!59;CL:0000680!1.90e-14!57;CL:0000056!1.90e-14!57;CL:0000355!1.90e-14!57;CL:0000187!5.96e-13!54;CL:0000393!1.64e-11!60;CL:0000211!1.64e-11!60;CL:0000192!1.98e-09!42;CL:0000514!1.98e-09!42;CL:0000359!2.07e-07!32;CL:0002620!3.27e-07!23 | |ontology_enrichment_celltype=CL:0000055!2.72e-22!180;CL:0000057!1.97e-15!75;CL:0000183!1.26e-14!59;CL:0000680!1.90e-14!57;CL:0000056!1.90e-14!57;CL:0000355!1.90e-14!57;CL:0000187!5.96e-13!54;CL:0000393!1.64e-11!60;CL:0000211!1.64e-11!60;CL:0000192!1.98e-09!42;CL:0000514!1.98e-09!42;CL:0000359!2.07e-07!32;CL:0002620!3.27e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000187;3.93e-08;55!CL:0002620;4.29e-08;23!CL:0000359;9.29e-08;32!CL:0000192;3.66e-07;43!CL:0000188;6.82e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,6.37e-15,58;CL:0000056,6.37e-15,58;CL:0000355,6.37e-15,58;CL:0000057,1.02e-13,76;CL:0000187,2.88e-13,55;CL:0000393,3.02e-11,61;CL:0000211,3.02e-11,61;CL:0000192,1.13e-09,43;CL:0000514,1.13e-09,43;CL:0002620,3.68e-08,23;CL:0000359,1.11e-07,32;CL:0000188,7.08e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000355;7.01e-09;58!CL:0000514;3.66e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;2.87e-16;22!UBERON:0001950;2.53e-15;20!UBERON:0002385;3.13e-14;31!UBERON:0001015;3.13e-14;31!UBERON:0000383;3.13e-14;31!UBERON:0000956;5.08e-14;25!UBERON:0000203;5.08e-14;25!UBERON:0001869;5.00e-13;32!UBERON:0001893;9.67e-13;34!UBERON:0002791;2.07e-12;32!UBERON:0003528;3.45e-12;34!UBERON:0002020;3.45e-12;34!UBERON:0002780;3.40e-11;41!UBERON:0001890;3.40e-11;41!UBERON:0000073;3.30e-10;53!UBERON:0002616;3.30e-10;53!UBERON:0001134;4.72e-10;16!UBERON:0002036;4.72e-10;16!UBERON:0001017;6.25e-10;75!UBERON:0000955;1.36e-08;68!UBERON:0001016;7.19e-08;83!UBERON:0001013;1.96e-07;14!UBERON:0006876;4.36e-07;11 | |||
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| ||
|short_description=p3@TRIO | |short_description=p3@TRIO | ||
}} | }} |
Latest revision as of 19:24, 15 September 2015
Short description: | p3@TRIO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRIO_5end |
Coexpression cluster: | C950_liposarcoma_extraskeletal_Fibroblast_Smooth_Preadipocyte_neuroblastoma_mesenchymal |
Association with transcript: | 229bp_to_ENST00000515710, uc003jfi.1_5end |
EntrezGene: | TRIO |
HGNC: | 12303 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 6.37e-15 | 58 |
myoblast | 6.37e-15 | 58 |
multi-potent skeletal muscle stem cell | 6.37e-15 | 58 |
fibroblast | 1.02e-13 | 76 |
muscle cell | 2.88e-13 | 55 |
electrically responsive cell | 3.02e-11 | 61 |
electrically active cell | 3.02e-11 | 61 |
smooth muscle cell | 1.13e-09 | 43 |
smooth muscle myoblast | 1.13e-09 | 43 |
skin fibroblast | 3.68e-08 | 23 |
vascular associated smooth muscle cell | 1.11e-07 | 32 |
cell of skeletal muscle | 7.08e-07 | 9 |