FFCP PHASE1:Hg19::chr5:95998746..95998764,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=831 | |EntrezGene=831 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1515 | |HGNC=1515 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z468 | |UniProt=B7Z468 | ||
|association_with_transcript=0bp_to_ENST00000508608,uc011cuo.1_5end | |association_with_transcript=0bp_to_ENST00000508608,uc011cuo.1_5end | ||
|cluster_id=chr5:95998746..95998764,+ | |||
|coexpression_cluster_id=C4533 | |coexpression_cluster_id=C4533 | ||
|description=CAGE_peak_12_at_CAST_5end | |description=CAGE_peak_12_at_CAST_5end | ||
|id=chr5:95998746..95998764,+ | |id=chr5:95998746..95998764,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.01e-11!43;CL:0000223!5.86e-11!59 | |ontology_enrichment_celltype=CL:0002076!2.01e-11!43;CL:0000223!5.86e-11!59 | ||
|ontology_enrichment_celltype_v019=CL:0002076;5.74e-09;42!CL:0002251;5.40e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.23e-11,42;CL:0000223,1.50e-10,58;CL:0002251,8.33e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.71e-07!106 | |ontology_enrichment_disease=DOID:305!5.71e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.05e-15!169;UBERON:0000925!3.05e-15!169;UBERON:0006595!3.05e-15!169;UBERON:0001007!9.07e-14!155;UBERON:0001555!9.07e-14!155;UBERON:0007026!9.07e-14!155;UBERON:0003104!3.51e-11!238;UBERON:0009142!3.51e-11!238;UBERON:0004921!7.95e-11!129;UBERON:0004185!7.95e-11!129;UBERON:0000481!1.25e-10!347;UBERON:0000468!1.43e-10!659;UBERON:0001004!1.88e-10!72;UBERON:0000467!4.99e-10!625;UBERON:0000475!5.16e-10!365;UBERON:0000480!6.39e-10!626;UBERON:0000161!5.62e-09!35;UBERON:0000077!7.10e-09!130;UBERON:0003102!8.79e-09!95;UBERON:0002100!1.52e-08!216;UBERON:0000062!2.00e-08!511;UBERON:0000486!2.56e-08!82;UBERON:0002385!4.26e-08!63;UBERON:0001015!4.26e-08!63;UBERON:0000383!4.26e-08!63;UBERON:0002050!1.91e-07!605;UBERON:0005423!1.91e-07!605;UBERON:0001134!2.21e-07!61;UBERON:0002036!2.21e-07!61;UBERON:0003082!2.21e-07!61;UBERON:0000923!3.59e-07!604;UBERON:0005291!3.59e-07!604;UBERON:0006598!3.59e-07!604;UBERON:0002532!3.59e-07!604;UBERON:0000922!6.32e-07!612;UBERON:0000065!8.83e-07!53 | |ontology_enrichment_uberon=UBERON:0004119!3.05e-15!169;UBERON:0000925!3.05e-15!169;UBERON:0006595!3.05e-15!169;UBERON:0001007!9.07e-14!155;UBERON:0001555!9.07e-14!155;UBERON:0007026!9.07e-14!155;UBERON:0003104!3.51e-11!238;UBERON:0009142!3.51e-11!238;UBERON:0004921!7.95e-11!129;UBERON:0004185!7.95e-11!129;UBERON:0000481!1.25e-10!347;UBERON:0000468!1.43e-10!659;UBERON:0001004!1.88e-10!72;UBERON:0000467!4.99e-10!625;UBERON:0000475!5.16e-10!365;UBERON:0000480!6.39e-10!626;UBERON:0000161!5.62e-09!35;UBERON:0000077!7.10e-09!130;UBERON:0003102!8.79e-09!95;UBERON:0002100!1.52e-08!216;UBERON:0000062!2.00e-08!511;UBERON:0000486!2.56e-08!82;UBERON:0002385!4.26e-08!63;UBERON:0001015!4.26e-08!63;UBERON:0000383!4.26e-08!63;UBERON:0002050!1.91e-07!605;UBERON:0005423!1.91e-07!605;UBERON:0001134!2.21e-07!61;UBERON:0002036!2.21e-07!61;UBERON:0003082!2.21e-07!61;UBERON:0000923!3.59e-07!604;UBERON:0005291!3.59e-07!604;UBERON:0006598!3.59e-07!604;UBERON:0002532!3.59e-07!604;UBERON:0000922!6.32e-07!612;UBERON:0000065!8.83e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.87e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.26e-15,160;UBERON:0000925,3.26e-15,160;UBERON:0006595,3.26e-15,160;UBERON:0001007,5.19e-14,145;UBERON:0001555,5.19e-14,145;UBERON:0007026,5.19e-14,145;UBERON:0004921,9.48e-13,118;UBERON:0001004,1.25e-10,74;UBERON:0000161,1.49e-08,36;UBERON:0000065,2.82e-07,54;UBERON:0003102,3.43e-07,99;UBERON:0001041,5.13e-07,87;UBERON:0000072,6.08e-07,47;UBERON:0002385,7.59e-07,64;UBERON:0001015,7.59e-07,64;UBERON:0000383,7.59e-07,64;UBERON:0002100,8.18e-07,199;UBERON:0001048,9.95e-07,160 | |||
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| ||
|short_description=p12@CAST | |short_description=p12@CAST | ||
}} | }} |
Latest revision as of 09:01, 19 September 2015
Short description: | p12@CAST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CAST_5end |
Coexpression cluster: | C4533_lung_gall_rectal_salivary_Prostate_Keratinocyte_amniotic |
Association with transcript: | 0bp_to_ENST00000508608, uc011cuo.1_5end |
EntrezGene: | CAST |
HGNC: | 1515 |
UniProt: | B7Z468 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.23e-11 | 42 |
endodermal cell | 1.50e-10 | 58 |
epithelial cell of alimentary canal | 8.33e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.26e-15 | 160 |
endoderm | 3.26e-15 | 160 |
presumptive endoderm | 3.26e-15 | 160 |
digestive system | 5.19e-14 | 145 |
digestive tract | 5.19e-14 | 145 |
primitive gut | 5.19e-14 | 145 |
subdivision of digestive tract | 9.48e-13 | 118 |
respiratory system | 1.25e-10 | 74 |
orifice | 1.49e-08 | 36 |
respiratory tract | 2.82e-07 | 54 |
surface structure | 3.43e-07 | 99 |
foregut | 5.13e-07 | 87 |
segment of respiratory tract | 6.08e-07 | 47 |
muscle tissue | 7.59e-07 | 64 |
musculature | 7.59e-07 | 64 |
musculature of body | 7.59e-07 | 64 |
trunk | 8.18e-07 | 199 |
primordium | 9.95e-07 | 160 |