FFCP PHASE1:Hg19::chr6:106535687..106535706,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=639 | |EntrezGene=639 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9346 | |HGNC=9346 | ||
|TSSclassifier=strong | |||
|UniProt=B2REA5 | |UniProt=B2REA5 | ||
|association_with_transcript=232bp_to_ENST00000424894_5end | |association_with_transcript=232bp_to_ENST00000424894_5end | ||
|cluster_id=chr6:106535687..106535706,+ | |||
|coexpression_cluster_id=C65 | |coexpression_cluster_id=C65 | ||
|description=CAGE_peak_8_at_PRDM1_5end | |description=CAGE_peak_8_at_PRDM1_5end | ||
|id=chr6:106535687..106535706,+ | |id=chr6:106535687..106535706,+ | ||
|ontology_enrichment_celltype=CL:0002009!1.35e-45!65;CL:0002194!3.79e-45!63;CL:0000576!3.79e-45!63;CL:0000040!3.79e-45!63;CL:0000559!3.79e-45!63;CL:0000557!2.30e-40!71;CL:0000839!4.88e-39!70;CL:0000766!3.14e-38!76;CL:0002057!3.21e-37!42;CL:0000860!6.45e-34!45;CL:0000763!2.39e-30!112;CL:0000049!2.39e-30!112;CL:0000738!1.33e-22!140;CL:0002087!1.81e-22!119;CL:0002031!4.85e-20!124;CL:0000037!3.48e-18!172;CL:0000566!3.48e-18!172;CL:0002032!5.20e-18!165;CL:0000837!5.20e-18!165;CL:0000988!6.93e-17!182;CL:0000990!6.44e-08!8 | |ontology_enrichment_celltype=CL:0002009!1.35e-45!65;CL:0002194!3.79e-45!63;CL:0000576!3.79e-45!63;CL:0000040!3.79e-45!63;CL:0000559!3.79e-45!63;CL:0000557!2.30e-40!71;CL:0000839!4.88e-39!70;CL:0000766!3.14e-38!76;CL:0002057!3.21e-37!42;CL:0000860!6.45e-34!45;CL:0000763!2.39e-30!112;CL:0000049!2.39e-30!112;CL:0000738!1.33e-22!140;CL:0002087!1.81e-22!119;CL:0002031!4.85e-20!124;CL:0000037!3.48e-18!172;CL:0000566!3.48e-18!172;CL:0002032!5.20e-18!165;CL:0000837!5.20e-18!165;CL:0000988!6.93e-17!182;CL:0000990!6.44e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.32e-112;33!CL:0002057;5.32e-112;33!CL:0000473;9.04e-100;39!CL:0000234;9.04e-100;39!CL:0000576;1.03e-62;48!CL:0000766;2.86e-39;69!CL:0000763;8.11e-19;100!CL:0000738;2.14e-15;136!CL:0002087;5.63e-14;104!CL:0000235;1.16e-13;6!CL:0000840;3.32e-08;5!CL:0002619;1.04e-07;3!CL:0000219;3.26e-07;193!CL:0000988;4.51e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,5.06e-111,61;CL:0002194,1.53e-108,59;CL:0000576,1.53e-108,59;CL:0000040,1.53e-108,59;CL:0000559,1.53e-108,59;CL:0000473,2.88e-108,48;CL:0000234,2.88e-108,48;CL:0000557,1.15e-100,67;CL:0000839,1.55e-96,66;CL:0000860,2.20e-95,42;CL:0002057,2.20e-95,42;CL:0000766,4.45e-88,72;CL:0000763,2.24e-60,108;CL:0000049,2.24e-60,108;CL:0002031,9.67e-54,120;CL:0002087,4.91e-53,115;CL:0000738,1.06e-46,136;CL:0002032,1.79e-38,161;CL:0000837,1.79e-38,161;CL:0000037,1.32e-36,168;CL:0000988,2.03e-34,177;CL:0000134,7.26e-14,354;CL:0000235,1.27e-13,6;CL:0002320,1.83e-13,361;CL:0000219,4.82e-12,386;CL:0000048,2.64e-10,427;CL:0000723,4.59e-10,433;CL:0000034,9.38e-10,441;CL:0000840,3.49e-08,5;CL:0001029,3.49e-08,5;CL:0002619,1.17e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.12e-69;42!CL:0000049;3.31e-20;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.46e-39!102;UBERON:0003061!4.46e-39!102;UBERON:0002193!1.70e-36!112;UBERON:0002371!1.57e-35!80;UBERON:0001474!6.53e-32!86;UBERON:0002405!3.16e-28!115;UBERON:0004765!8.65e-25!101;UBERON:0001434!8.65e-25!101;UBERON:0007023!5.59e-17!115;UBERON:0003081!2.55e-15!216;UBERON:0002204!1.95e-14!167;UBERON:0000062!1.25e-08!511;UBERON:0000926!1.96e-07!448;UBERON:0004120!1.96e-07!448;UBERON:0006603!1.96e-07!448;UBERON:0000467!3.27e-07!625;UBERON:0002050!3.28e-07!605;UBERON:0005423!3.28e-07!605;UBERON:0000922!3.31e-07!612;UBERON:0000480!3.76e-07!626;UBERON:0000923!8.17e-07!604;UBERON:0005291!8.17e-07!604;UBERON:0006598!8.17e-07!604;UBERON:0002532!8.17e-07!604 | |ontology_enrichment_uberon=UBERON:0002390!4.46e-39!102;UBERON:0003061!4.46e-39!102;UBERON:0002193!1.70e-36!112;UBERON:0002371!1.57e-35!80;UBERON:0001474!6.53e-32!86;UBERON:0002405!3.16e-28!115;UBERON:0004765!8.65e-25!101;UBERON:0001434!8.65e-25!101;UBERON:0007023!5.59e-17!115;UBERON:0003081!2.55e-15!216;UBERON:0002204!1.95e-14!167;UBERON:0000062!1.25e-08!511;UBERON:0000926!1.96e-07!448;UBERON:0004120!1.96e-07!448;UBERON:0006603!1.96e-07!448;UBERON:0000467!3.27e-07!625;UBERON:0002050!3.28e-07!605;UBERON:0005423!3.28e-07!605;UBERON:0000922!3.31e-07!612;UBERON:0000480!3.76e-07!626;UBERON:0000923!8.17e-07!604;UBERON:0005291!8.17e-07!604;UBERON:0006598!8.17e-07!604;UBERON:0002532!8.17e-07!604 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.76e-88,76;UBERON:0001474,2.58e-81,82;UBERON:0004765,1.34e-73,90;UBERON:0002405,4.81e-71,93;UBERON:0002390,3.95e-67,98;UBERON:0003061,3.95e-67,98;UBERON:0001434,1.13e-65,100;UBERON:0002193,2.24e-60,108;UBERON:0002204,7.29e-37,167;UBERON:0003081,4.41e-31,203;UBERON:0000926,1.16e-17,315;UBERON:0004120,1.16e-17,315;UBERON:0006603,1.16e-17,315;UBERON:0002384,6.50e-13,371;UBERON:0000923,9.37e-07,560;UBERON:0010316,9.37e-07,560;UBERON:0005291,9.37e-07,560;UBERON:0006598,9.37e-07,560;UBERON:0010317,9.37e-07,560;UBERON:0002532,9.37e-07,560 | |||
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|short_description=p8@PRDM1 | |short_description=p8@PRDM1 | ||
}} | }} |
Latest revision as of 14:59, 19 September 2015
Short description: | p8@PRDM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PRDM1_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 232bp_to_ENST00000424894_5end |
EntrezGene: | PRDM1 |
HGNC: | 9346 |
UniProt: | B2REA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.76e-88 | 76 |
bone element | 2.58e-81 | 82 |
skeletal element | 1.34e-73 | 90 |
immune system | 4.81e-71 | 93 |
hematopoietic system | 3.95e-67 | 98 |
blood island | 3.95e-67 | 98 |
skeletal system | 1.13e-65 | 100 |
hemolymphoid system | 2.24e-60 | 108 |
musculoskeletal system | 7.29e-37 | 167 |
lateral plate mesoderm | 4.41e-31 | 203 |
mesoderm | 1.16e-17 | 315 |
mesoderm-derived structure | 1.16e-17 | 315 |
presumptive mesoderm | 1.16e-17 | 315 |
connective tissue | 6.50e-13 | 371 |
germ layer | 9.37e-07 | 560 |
germ layer / neural crest | 9.37e-07 | 560 |
embryonic tissue | 9.37e-07 | 560 |
presumptive structure | 9.37e-07 | 560 |
germ layer / neural crest derived structure | 9.37e-07 | 560 |
epiblast (generic) | 9.37e-07 | 560 |